Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 3.6e-191 671.4 332 100.0
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 3.0e-137 492.3 334 73.1
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 5.4e-62 242.3 207 59.4
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.2e-61 241.1 208 57.7
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 1.6e-61 240.7 208 57.2
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 7.8e-61 238.4 230 53.0
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 7.8e-61 238.4 217 55.8
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 1.7e-60 237.3 208 56.2
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 1.5e-59 234.2 209 58.9
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 3.3e-59 233.0 253 50.2
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 7.3e-59 231.9 227 52.9
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 9.5e-59 231.5 207 54.6
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 1.2e-58 231.1 176 61.9
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 1.6e-58 230.7 211 55.0
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 2.8e-58 229.9 209 54.1
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 3.6e-58 229.6 207 55.6
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 8.0e-58 228.4 257 46.3
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 1.0e-57 228.0 207 56.0
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 2.3e-57 226.9 210 55.2
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 4.0e-57 226.1 215 53.0
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 4.0e-57 226.1 215 53.5
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 5.2e-57 225.7 211 54.0
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 5.2e-57 225.7 239 50.2
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 1.2e-56 224.6 239 49.8
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 1.2e-56 224.6 220 51.8
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 1.2e-56 224.6 217 53.9
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 1.5e-56 224.2 207 56.0
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 5.8e-56 222.2 220 51.4
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 7.5e-56 221.9 233 50.2
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 9.8e-56 221.5 218 52.3
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 9.8e-56 221.5 207 55.1
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 1.3e-55 221.1 206 54.4
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 1.7e-55 220.7 264 46.6
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 1.7e-55 220.7 226 51.8
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 6.4e-55 218.8 214 51.9
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 6.4e-55 218.8 224 51.8
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 6.4e-55 218.8 221 51.1
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 6.4e-55 218.8 216 50.9
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 6.4e-55 218.8 217 51.2
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 8.3e-55 218.4 221 52.0
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 8.3e-55 218.4 240 49.2
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 8.3e-55 218.4 220 50.9
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 8.3e-55 218.4 273 44.7
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 1.1e-54 218.0 214 50.0
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 1.1e-54 218.0 211 49.8
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 1.4e-54 217.6 228 50.0
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 1.4e-54 217.6 218 50.0
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 1.9e-54 217.2 212 51.9
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 1.9e-54 217.2 207 50.7
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 1.9e-54 217.2 224 50.4
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 2.4e-54 216.9 214 52.3
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 4.1e-54 216.1 213 50.2
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 4.1e-54 216.1 231 50.2
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 4.1e-54 216.1 207 52.7
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 4.1e-54 216.1 219 52.5
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 4.1e-54 216.1 207 52.7
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 5.4e-54 215.7 212 50.5
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 5.4e-54 215.7 223 50.7
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 7.0e-54 215.3 212 50.5
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 9.2e-54 214.9 216 50.5
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 9.2e-54 214.9 211 51.7
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 1.2e-53 214.5 216 50.5
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.0e-53 213.8 233 48.9
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 2.7e-53 213.4 238 49.6
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 2.7e-53 213.4 211 50.2
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 2.7e-53 213.4 221 49.8
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 3.5e-53 213.0 213 50.7
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 4.6e-53 212.6 207 54.1
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 6.0e-53 212.2 215 49.3
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 6.0e-53 212.2 215 49.3
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 7.8e-53 211.8 212 50.0
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 7.8e-53 211.8 225 50.7
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 1.0e-52 211.5 211 48.3
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 2.3e-52 210.3 219 50.2
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 3.0e-52 209.9 212 50.9
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 6.6e-52 208.8 213 52.6
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 8.6e-52 208.4 222 49.5
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 1.1e-51 208.0 215 48.8
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 1.1e-51 208.0 217 47.5
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 1.1e-51 208.0 217 47.5
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 1.9e-51 207.2 222 48.6
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 3.3e-51 206.5 221 49.3
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 3.3e-51 206.5 221 49.3
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 7.3e-51 205.3 212 49.1
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 7.3e-51 205.3 205 51.2
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 1.6e-50 204.1 213 49.3
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 2.8e-50 203.4 232 48.3
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 4.7e-50 202.6 216 48.1
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 4.7e-50 202.6 224 48.7
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 4.7e-50 202.6 211 51.7
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 6.2e-50 202.2 247 46.2
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 8.0e-50 201.8 176 54.5
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.1e-49 201.4 254 44.9
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.4e-49 201.1 247 46.6
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 1.8e-49 200.7 230 47.4
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 3.1e-49 199.9 240 43.8
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 4.0e-49 199.5 218 47.2
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 5.2e-49 199.1 235 46.4
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 3.4e-48 196.4 239 45.6
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 4.4e-48 196.1 229 45.9
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 1.3e-47 194.5 220 46.8
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 6.4e-47 192.2 199 47.7
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 6.4e-47 192.2 199 47.7
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 8.3e-47 191.8 183 52.5
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 1.4e-46 191.0 254 42.9
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 1.3e-44 184.5 262 40.1
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 8.6e-44 181.8 188 50.5
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 4.3e-43 179.5 193 47.2
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-42 177.2 257 40.9
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 4.7e-42 176.0 208 45.2
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 3.1e-41 173.3 210 44.8
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 8.9e-41 171.8 235 43.4
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 1.5e-40 171.0 230 44.8
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 2.0e-40 170.6 243 42.0
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 1.9e-38 164.1 134 59.7
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 5.4e-38 162.5 133 59.4
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 6.2e-34 149.1 230 40.0
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 5.8e-32 142.5 169 45.0
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 2.9e-31 140.2 221 37.6
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.1e-25 121.7 138 44.2
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 2.1e-21 107.5 74 71.6
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 6.0e-21 105.9 139 37.4
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 5.1e-12 76.3 87 44.8
PRCOL_00005055 Prasinoderma coloniale HOM05D006231 ORTHO05D007857 8.7e-12 75.5 137 32.8
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 4.0e-09 66.6 245 24.1
PRCOL_00000981 Prasinoderma coloniale HOM05D006270 ORTHO05D007755 2.9e-07 60.5 145 32.4


User provided reference genes

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