Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07819 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 3.4e-65 251.5 126 100.0
SEGI_35855 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 3.4e-65 251.5 126 100.0
SEGI_25656 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 2.8e-64 248.4 125 99.2
Pp3c21_7940 Physcomitrium patens HOM05D005646 ORTHO05D006828 2.6e-33 145.6 124 58.9
Mapoly0066s0082 Marchantia polymorpha HOM05D005646 ORTHO05D006828 9.2e-31 137.1 123 57.7
Dinv32048 Davidia involucrata HOM05D005646 ORTHO05D006828 1.2e-30 136.7 127 58.3
GSVIVG01000839001 Vitis vinifera HOM05D005646 ORTHO05D006828 2.7e-30 135.6 124 59.7
SGA_v2.0_scaffold249G44948 Striga asiatica HOM05D005646 ORTHO05D006828 4.6e-30 134.8 124 59.7
MBI19_g40603_MAGBIO Magnolia biondii HOM05D005646 ORTHO05D006828 7.8e-30 134.0 122 56.6
Sed0017230 Sechium edule HOM05D005646 ORTHO05D006828 1.3e-29 133.3 124 58.9
Glyma.11G113800 Glycine max HOM05D005646 ORTHO05D006828 1.7e-29 132.9 127 55.1
Lsat_1_v5_gn_4_30541 Lactuca sativa HOM05D005646 ORTHO05D006828 1.7e-29 132.9 126 57.9
CDE08G1053 Ceratophyllum demersum HOM05D005646 ORTHO05D006828 2.3e-29 132.5 123 56.9
Actinidia19445 Actinidia chinensis HOM05D005646 ORTHO05D006828 5.1e-29 131.3 123 56.9
Aqoxy1G00222 Aquilegia oxysepala HOM05D005646 ORTHO05D006828 8.6e-29 130.6 126 54.0
CsaV3_5G024710 Cucumis sativus L. HOM05D005646 ORTHO05D006828 8.6e-29 130.6 127 58.3
ECA234G1046 Erigeron canadensis HOM05D005646 ORTHO05D006828 8.6e-29 130.6 125 54.4
ClCG01G007660 Citrullus lanatus HOM05D005646 ORTHO05D006828 1.5e-28 129.8 127 56.7
Eucgr.J01194 Eucalyptus grandis HOM05D005646 ORTHO05D006828 1.5e-28 129.8 126 54.8
Peaxi162Scf00309g00328 Petunia axillaris HOM05D005646 ORTHO05D006828 1.5e-28 129.8 127 56.7
MSTRG.20533 Avicennia marina HOM05D005646 ORTHO05D006828 2.5e-28 129.0 125 57.6
Gohir.D10G253200 Gossypium hirsutum HOM05D005646 ORTHO05D006828 2.5e-28 129.0 125 56.8
HanXRQChr16g0525351 Helianthus annuus HOM05D005646 ORTHO05D006828 3.3e-28 128.6 125 54.4
Gohir.A10G241000 Gossypium hirsutum HOM05D005646 ORTHO05D006828 4.3e-28 128.3 125 56.0
Gorai.011G293500 Gossypium raimondii HOM05D005646 ORTHO05D006828 4.3e-28 128.3 125 56.0
Atru.chr11.2492 Acer truncatum HOM05D005646 ORTHO05D006828 5.6e-28 127.9 124 51.6
Hma1.2p1_0902F.1_g234850 Hydrangea macrophylla HOM05D005646 ORTHO05D006828 5.6e-28 127.9 126 55.6
Manes.11G002900 Manihot esculenta HOM05D005646 ORTHO05D006828 5.6e-28 127.9 120 57.5
Glyma.12G039666 Glycine max HOM05D005646 ORTHO05D006828 9.6e-28 127.1 126 53.2
MD02G1293900 Malus domestica HOM05D005646 ORTHO05D006828 9.6e-28 127.1 125 52.8
CSS0034883 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 1.2e-27 126.7 128 56.2
CSS0050243 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 1.2e-27 126.7 128 56.2
Ciclev10031582m.g Citrus clementina HOM05D005646 ORTHO05D006828 1.2e-27 126.7 123 54.5
PSO017G4843 Papaver somniferum HOM05D005646 ORTHO05D006828 1.2e-27 126.7 125 52.0
COL.COLO4_33459 Corchorus olitorius HOM05D005646 ORTHO05D006828 1.6e-27 126.3 125 56.0
PSO341G0002 Papaver somniferum HOM05D005646 ORTHO05D006828 1.6e-27 126.3 124 52.4
QL04p013757 Quercus lobata HOM05D005646 ORTHO05D006828 1.6e-27 126.3 124 51.6
MELO3C005130.2 Cucumis melo HOM05D005646 ORTHO05D006828 2.1e-27 125.9 131 55.7
Cc02_g29140 Coffea canephora HOM05D005646 ORTHO05D006828 8.1e-27 124.0 125 54.4
TWI63G1320 Tripterygium wilfordii HOM05D005646 ORTHO05D006828 8.1e-27 124.0 121 56.2
Lalb_Chr03g0025471 Lupinus albus HOM05D005646 ORTHO05D006828 1.4e-26 123.2 127 52.8
PSO063G6839 Papaver somniferum HOM05D005646 ORTHO05D006828 1.4e-26 123.2 124 51.6
Nitab4.5_0000316g0120 Nicotiana tabacum HOM05D005646 ORTHO05D006828 1.8e-26 122.9 126 53.2
CAN.G1571.4 Capsicum annuum HOM05D005646 ORTHO05D006828 2.4e-26 122.5 127 54.3
CiPaw.13G011000 Carya illinoinensis HOM05D005646 ORTHO05D006828 3.1e-26 122.1 127 52.0
FvH4_5g29000 Fragaria vesca HOM05D005646 ORTHO05D006828 3.1e-26 122.1 125 50.4
FAN08G2254 Fragaria x ananassa HOM05D005646 ORTHO05D006828 3.1e-26 122.1 125 50.4
FAN18G3275 Fragaria x ananassa HOM05D005646 ORTHO05D006828 3.1e-26 122.1 125 50.4
THA.LOC104824183 Tarenaya hassleriana HOM05D005646 ORTHO05D006828 4.0e-26 121.7 124 53.2
Duzib128G0351 Durio zibethinus HOM05D005646 ORTHO05D006828 5.2e-26 121.3 122 53.3
FAN13G1025 Fragaria x ananassa HOM05D005646 ORTHO05D006828 5.2e-26 121.3 125 51.2
Solyc01g068470.4 Solanum lycopersicum HOM05D005646 ORTHO05D006828 5.2e-26 121.3 126 52.4
Sopen01g030430 Solanum pennellii HOM05D005646 ORTHO05D006828 5.2e-26 121.3 126 52.4
Lj3g0019487 Lotus japonicus HOM05D005646 ORTHO05D006828 6.8e-26 120.9 129 52.7
DCAR_022352 Daucus carota HOM05D005646 ORTHO05D006828 1.2e-25 120.2 126 51.6
SalBow5G2332 Salvia bowleyana HOM05D005646 ORTHO05D006828 1.2e-25 120.2 120 54.2
SalBow5G2661 Salvia bowleyana HOM05D005646 ORTHO05D006828 1.2e-25 120.2 120 54.2
arahy.Tifrunner.gnm1.ann1.HJ7TPY Arachis hypogaea HOM05D005646 ORTHO05D006828 1.5e-25 119.8 127 51.2
Lj9A646T48 Lonicera japonica HOM05D005646 ORTHO05D006828 2.6e-25 119.0 131 54.2
Medtr4g071010 Medicago truncatula HOM05D005646 ORTHO05D006828 4.4e-25 118.2 128 50.8
EL10Ac2g02850 Beta vulgaris HOM05D005646 ORTHO05D006828 5.8e-25 117.9 123 54.5
Migut.B01206 Erythranthe guttata HOM05D005646 ORTHO05D006828 5.8e-25 117.9 121 56.2
Hund13332 Selenicereus undatus HOM05D005646 ORTHO05D006828 5.8e-25 117.9 127 55.1
RcHm_v2.0_Chr7g0221681 Rosa chinensis HOM05D005646 ORTHO05D006828 7.6e-25 117.5 122 50.0
AL4G36080 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 9.9e-25 117.1 126 53.2
Potri.001G024200 Populus trichocarpa HOM05D005646 ORTHO05D006828 9.9e-25 117.1 124 50.8
CARHR133490 Cardamine hirsuta HOM05D005646 ORTHO05D006828 1.7e-24 116.3 125 52.8
HPP92_001013 Vanilla planifolia HOM05D005646 ORTHO05D006828 1.7e-24 116.3 125 51.2
Sp4g21170 Schrenkiella parvula HOM05D005646 ORTHO05D006828 2.2e-24 115.9 126 53.2
ATR0217G018 Amborella trichopoda HOM05D005646 ORTHO05D006828 2.9e-24 115.5 119 53.8
TPR.G30507 Trifolium pratense HOM05D005646 ORTHO05D006828 2.9e-24 115.5 130 50.0
Carub.0004s2080 Capsella rubella HOM05D005646 ORTHO05D006828 4.9e-24 114.8 124 50.0
Sc17g0003830 Simmondsia chinensis HOM05D005646 ORTHO05D006828 4.9e-24 114.8 126 51.6
Sabra01G0018200 Salix brachista HOM05D005646 ORTHO05D000112 6.4e-24 114.4 124 49.2
Ah.10g030810 Amaranthus hybridus HOM05D005646 ORTHO05D006828 8.4e-24 114.0 124 54.8
Ca_20909_v3 Cicer arietinum L. HOM05D005646 ORTHO05D006828 8.4e-24 114.0 129 51.2
PGR142G3067 Punica granatum HOM05D005646 ORTHO05D006828 8.4e-24 114.0 125 53.6
AUR62031673 Chenopodium quinoa HOM05D005646 ORTHO05D006828 1.9e-23 112.8 127 49.6
C03p25580 Brassica napus HOM05D005646 ORTHO05D006828 3.2e-23 112.1 126 51.6
AUR62032557 Chenopodium quinoa HOM05D005646 ORTHO05D006828 4.2e-23 111.7 125 50.4
A03p21590 Brassica napus HOM05D005646 ORTHO05D006828 9.3e-23 110.5 126 50.8
vmacro13731 Vaccinium macrocarpon HOM05D005646 ORTHO05D006828 9.3e-23 110.5 125 45.6
arahy.Tifrunner.gnm1.ann1.2P0PPD Arachis hypogaea HOM05D005646 ORTHO05D006828 2.7e-22 109.0 110 52.7
VMungo1127G2196 Vigna mungo HOM05D005646 ORTHO05D006828 7.8e-22 107.5 114 50.9
Os05g0381500 Oryza sativa ssp. japonica HOM05D005646 ORTHO05D006828 1.7e-21 106.3 122 48.4
CANSAT54G2531 Cannabis sativa HOM05D005646 ORTHO05D006828 2.3e-21 105.9 126 49.2
AT2G38780 Arabidopsis thaliana HOM05D005646 ORTHO05D006828 3.9e-21 105.1 147 42.9
Rhsim07G0062900 Rhododendron simsii HOM05D005646 ORTHO05D006828 3.9e-21 105.1 126 46.0
unitig_746.g26627 Utricularia gibba HOM05D005646 ORTHO05D006828 5.1e-21 104.8 119 48.7
Atru.chr11.2464 Acer truncatum HOM05D005646 ORTHO05D006828 6.6e-21 104.4 103 50.5
AL4G20290 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 6.6e-21 104.4 120 51.7
Thecc.10G006200 Theobroma cacao HOM05D005646 ORTHO05D006828 6.6e-21 104.4 90 60.0
BraA03t11395Z Brassica rapa HOM05D005646 ORTHO05D006828 1.1e-20 103.6 145 46.2
BolC3t14946H Brassica oleracea HOM05D005646 ORTHO05D006828 3.3e-20 102.1 145 45.5
AagrBONN_evm.TU.Sc2ySwM_228.261 Anthoceros agrestis HOM05D005646 ORTHO05D006828 4.3e-20 101.7 150 39.3
SMO145G0178 Selaginella moellendorffii HOM05D005646 ORTHO05D006828 2.8e-19 99.0 126 46.8
Thhalv10016593m.g Eutrema salsugineum HOM05D005646 ORTHO05D006828 6.9e-18 94.4 78 61.5
AL4G20430 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 1.5e-17 93.2 101 54.5
Nn7g36491 Nelumbo nucifera HOM05D005646 ORTHO05D006828 2.4e-15 85.9 52 76.9
Zm00001eb347150 Zea mays HOM05D005646 ORTHO05D006828 3.2e-15 85.5 97 48.5
Haze_03084 Corylus avellana HOM05D005646 ORTHO05D006828 1.6e-14 83.2 52 75.0
Cpa.g.sc197.4 Carica papaya HOM05D005646 ORTHO05D006828 5.1e-13 78.2 52 69.2
Aa31LG5G20900 Aethionema arabicum HOM05D005646 ORTHO05D006828 8.7e-13 77.4 106 46.2
Prupe.2G029800 Prunus persica HOM05D005646 ORTHO05D006828 2.5e-12 75.9 95 44.2
SalBow1G3971 Salvia bowleyana HOM05D005646 ORTHO05D006828 1.6e-11 73.2 47 74.5
Nitab4.5_0013777g0020 Nicotiana tabacum HOM05D005646 ORTHO05D006828 8.1e-11 70.9 116 40.5
Cre13.g607900 Chlamydomonas reinhardtii HOM05D005646 ORTHO05D006828 5.8e-09 64.7 126 32.5
CBR_g29393 Chara braunii HOM05D005646 ORTHO05D006828 1.3e-08 63.5 62 51.6
PRCOL_00006924 Prasinoderma coloniale HOM05D005646 ORTHO05D006828 2.2e-08 62.8 86 43.0
CBR_g38389 Chara braunii HOM05D005646 ORTHO05D006828 8.4e-08 60.8 109 34.9
TAR053G0001 Trochodendron aralioides HOM05D005646 ORTHO05D006828 1.4e-07 60.1 111 38.7
Sc15g0003140 Simmondsia chinensis HOM05D005646 ORTHO05D006828 4.6e-06 55.1 126 33.3


User provided reference genes

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