Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 3.3e-40 167.9 86 100.0
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 8.0e-18 93.6 72 65.3
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 6.8e-17 90.5 73 58.9
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 8.8e-17 90.1 74 59.5
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 1.5e-16 89.4 74 58.1
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.5e-16 89.4 72 63.9
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 2.6e-16 88.6 72 62.5
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 2.6e-16 88.6 72 62.5
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.2e-15 85.5 81 51.9
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 2.8e-15 85.1 84 53.6
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 2.8e-15 85.1 72 61.1
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 2.8e-15 85.1 72 59.7
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 3.7e-15 84.7 77 51.9
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 3.7e-15 84.7 70 60.0
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 4.8e-15 84.3 72 58.3
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 4.8e-15 84.3 75 53.3
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 4.8e-15 84.3 75 53.3
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 4.8e-15 84.3 72 59.7
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 8.3e-15 83.6 77 50.6
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 8.3e-15 83.6 74 54.1
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 8.3e-15 83.6 75 54.7
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 1.8e-14 82.4 72 58.3
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 1.8e-14 82.4 72 56.9
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 3.1e-14 81.6 74 52.7
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 5.4e-14 80.9 72 59.7
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 7.0e-14 80.5 81 49.4
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 7.0e-14 80.5 72 59.7
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 9.1e-14 80.1 72 58.3
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 1.2e-13 79.7 77 50.6
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 1.2e-13 79.7 77 49.4
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 1.2e-13 79.7 72 58.3
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 1.2e-13 79.7 79 45.6
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 2.0e-13 79.0 72 56.9
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 2.0e-13 79.0 72 55.6
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 2.0e-13 79.0 74 50.0
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 2.0e-13 79.0 75 53.3
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 3.5e-13 78.2 72 51.4
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 3.5e-13 78.2 72 56.9
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 3.5e-13 78.2 78 50.0
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 3.5e-13 78.2 77 50.6
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 4.5e-13 77.8 75 50.7
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 4.5e-13 77.8 72 56.9
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 5.9e-13 77.4 77 48.1
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 7.7e-13 77.0 77 48.1
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 1.3e-12 76.3 72 55.6
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 1.7e-12 75.9 72 54.2
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 2.3e-12 75.5 71 52.1
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 2.9e-12 75.1 75 52.0
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 2.9e-12 75.1 83 45.8
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 3.8e-12 74.7 75 48.0
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 6.6e-12 73.9 73 50.7
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 1.9e-11 72.4 74 48.6
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 5.5e-11 70.9 72 50.0
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 5.5e-11 70.9 72 50.0
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 5.5e-11 70.9 72 48.6
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 2.1e-10 68.9 62 54.8
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 2.8e-10 68.6 68 50.0
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 2.8e-10 68.6 64 59.4
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 3.6e-10 68.2 70 47.1
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 2.3e-09 65.5 62 56.5
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 4.0e-09 64.7 72 45.8
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 4.0e-09 64.7 64 51.6
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 6.8e-09 63.9 62 54.8
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 6.8e-09 63.9 67 46.3
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 1.2e-08 63.2 68 47.1
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 1.5e-08 62.8 74 45.9
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 2.0e-08 62.4 62 54.8
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 2.6e-08 62.0 53 56.6
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 2.6e-08 62.0 60 53.3
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 2.6e-08 62.0 62 51.6
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 5.7e-08 60.8 60 51.7
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 7.5e-08 60.5 62 51.6
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 2.2e-07 58.9 82 42.7
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 3.7e-07 58.2 69 42.0
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 6.3e-07 57.4 65 44.6
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 8.3e-07 57.0 60 46.7
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 1.8e-06 55.8 74 37.8


User provided reference genes

Program Settings