Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07805 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 2.4e-104 382.1 182 100.0
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 3.6e-44 182.2 130 63.1
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 2.0e-42 176.4 132 62.9
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 1.7e-41 173.3 118 67.8
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 2.2e-41 172.9 107 72.9
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 4.9e-41 171.8 115 67.0
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 8.3e-41 171.0 103 71.8
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 1.1e-40 170.6 144 59.0
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 1.1e-40 170.6 103 71.8
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 1.4e-40 170.2 129 60.5
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 1.9e-40 169.9 115 64.3
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 2.4e-40 169.5 125 64.8
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.4e-40 169.5 107 70.1
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 2.4e-40 169.5 143 57.3
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 2.4e-40 169.5 143 57.3
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 2.4e-40 169.5 107 70.1
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 5.4e-40 168.3 103 73.8
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 7.1e-40 167.9 103 71.8
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 7.1e-40 167.9 122 63.1
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 9.2e-40 167.5 102 71.6
Hma1.2p1_0393F.1_g143090 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 9.2e-40 167.5 102 71.6
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 9.2e-40 167.5 108 67.6
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 9.2e-40 167.5 126 62.7
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 9.2e-40 167.5 143 55.2
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 9.2e-40 167.5 106 71.7
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 1.2e-39 167.2 149 55.0
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 1.2e-39 167.2 132 58.3
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 1.6e-39 166.8 102 73.5
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 2.1e-39 166.4 101 72.3
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 2.1e-39 166.4 125 63.2
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 2.1e-39 166.4 107 69.2
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 2.1e-39 166.4 117 66.7
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 2.7e-39 166.0 115 63.5
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 4.6e-39 165.2 103 71.8
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 4.6e-39 165.2 157 54.8
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 4.6e-39 165.2 102 72.5
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 6.0e-39 164.9 107 70.1
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 6.0e-39 164.9 107 70.1
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 6.0e-39 164.9 122 63.1
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 7.8e-39 164.5 130 58.5
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 7.8e-39 164.5 111 65.8
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 7.8e-39 164.5 103 71.8
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 7.8e-39 164.5 147 55.8
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.0e-38 164.1 122 64.8
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 1.0e-38 164.1 110 66.4
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 1.0e-38 164.1 106 67.0
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.3e-38 163.7 103 70.9
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 1.3e-38 163.7 122 60.7
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 1.3e-38 163.7 107 66.4
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 1.3e-38 163.7 109 64.2
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 1.7e-38 163.3 102 68.6
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 1.7e-38 163.3 106 66.0
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 1.7e-38 163.3 106 67.9
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 2.3e-38 162.9 152 54.6
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 2.3e-38 162.9 102 69.6
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 3.0e-38 162.5 103 68.9
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 3.9e-38 162.2 110 64.5
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 5.1e-38 161.8 109 67.0
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 6.6e-38 161.4 135 53.3
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 6.6e-38 161.4 139 56.1
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 6.6e-38 161.4 140 56.4
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 6.6e-38 161.4 107 69.2
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 8.6e-38 161.0 124 59.7
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 8.6e-38 161.0 105 65.7
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 8.6e-38 161.0 107 68.2
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 1.1e-37 160.6 102 66.7
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 1.1e-37 160.6 111 66.7
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 1.5e-37 160.2 115 65.2
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 1.9e-37 159.8 119 60.5
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 1.9e-37 159.8 104 65.4
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 2.5e-37 159.5 102 65.7
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 2.5e-37 159.5 102 65.7
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 2.5e-37 159.5 102 65.7
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 2.5e-37 159.5 120 63.3
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 2.5e-37 159.5 100 71.0
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 2.5e-37 159.5 103 68.0
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 2.5e-37 159.5 135 56.3
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 3.3e-37 159.1 110 62.7
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 3.3e-37 159.1 106 66.0
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 3.3e-37 159.1 132 56.1
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 4.3e-37 158.7 126 58.7
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 4.3e-37 158.7 106 68.9
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 5.6e-37 158.3 103 68.0
Glyma.04G082300 Glycine max HOM05D005302 ORTHO05D006422 5.6e-37 158.3 123 59.3
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 5.6e-37 158.3 107 68.2
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 1.2e-36 157.1 110 63.6
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.2e-36 157.1 103 68.0
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 1.6e-36 156.8 119 58.8
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 1.6e-36 156.8 146 51.4
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 1.6e-36 156.8 103 67.0
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.6e-36 156.8 103 67.0
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 1.6e-36 156.8 100 70.0
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 2.1e-36 156.4 135 57.0
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 2.8e-36 156.0 112 63.4
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 4.7e-36 155.2 102 67.6
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 8.1e-36 154.5 111 64.0
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 8.1e-36 154.5 131 56.5
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 1.8e-35 153.3 107 63.6
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 1.8e-35 153.3 115 60.0
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 5.2e-35 151.8 98 67.3
CDE05G2043 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.2e-34 150.6 116 57.8
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 1.2e-34 150.6 107 63.6
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 1.2e-34 150.6 125 55.2
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 2.2e-33 146.4 100 63.0
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 1.4e-32 143.7 91 68.1
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 8.6e-30 134.4 159 45.9
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 3.3e-29 132.5 101 54.5
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 5.2e-27 125.2 84 67.9
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 4.6e-23 112.1 116 50.9
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 4.6e-23 112.1 126 46.8
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 3.0e-22 109.4 99 53.5
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 3.3e-21 105.9 78 64.1
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 3.6e-20 102.4 75 56.0
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 7.6e-18 94.7 98 46.9
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 7.6e-18 94.7 65 61.5
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 1.7e-17 93.6 107 46.7
Lj7A704G81 Lonicera japonica HOM05D005302 ORTHO05D006422 6.2e-12 75.1 57 61.4
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 8.1e-12 74.7 53 64.2
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 1.2e-10 70.9 53 58.5
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 2.6e-10 69.7 53 58.5
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 2.6e-10 69.7 53 58.5
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 1.7e-09 67.0 56 57.1
CDE02G1858 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 2.4e-08 63.2 129 34.1
arahy.Tifrunner.gnm1.ann1.B6YE6K Arachis hypogaea HOM05D005302 ORTHO05D006422 4.2e-08 62.4 43 62.8
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 7.1e-08 61.6 86 39.5
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 6.0e-07 58.5 34 73.5


User provided reference genes

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