Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07661 Sequoiadendron giganteum HOM05D006200 ORTHO05D007569 2.6e-71 271.9 136 100.0
ATR0624G019 Amborella trichopoda HOM05D006200 ORTHO05D007569 1.3e-46 189.9 112 79.5
AT2G04900 Arabidopsis thaliana HOM05D006200 ORTHO05D007569 1.9e-45 186.0 128 70.3
AL3G42530 Arabidopsis lyrata HOM05D006200 ORTHO05D007569 2.4e-45 185.7 128 70.3
CARHR102920 Cardamine hirsuta HOM05D006200 ORTHO05D007569 2.4e-45 185.7 118 74.6
Potri.014G164500 Populus trichocarpa HOM05D006200 ORTHO05D007569 2.4e-45 185.7 112 77.7
BcaB06g26789 Brassica carinata HOM05D006200 ORTHO05D007569 3.2e-45 185.3 118 74.6
C07p10040 Brassica napus HOM05D006200 ORTHO05D007569 4.2e-45 184.9 128 70.3
BraA07t28456Z Brassica rapa HOM05D006200 ORTHO05D007569 4.2e-45 184.9 128 70.3
Peaxi162Scf00776g00024 Petunia axillaris HOM05D006200 ORTHO05D007569 4.2e-45 184.9 112 77.7
Prupe.3G200400 Prunus persica HOM05D006200 ORTHO05D007569 4.2e-45 184.9 112 78.6
Sed0012997 Sechium edule HOM05D006200 ORTHO05D007569 4.2e-45 184.9 110 80.0
THA.LOC104815354 Tarenaya hassleriana HOM05D006200 ORTHO05D007569 4.2e-45 184.9 112 76.8
A07p06630 Brassica napus HOM05D006200 ORTHO05D007569 7.1e-45 184.1 128 70.3
TWI36G1668 Tripterygium wilfordii HOM05D006200 ORTHO05D007569 7.1e-45 184.1 112 76.8
Sp3g23500 Schrenkiella parvula HOM05D006200 ORTHO05D007569 9.3e-45 183.7 112 75.9
MSTRG.14921 Avicennia marina HOM05D006200 ORTHO05D007569 1.2e-44 183.3 115 75.7
BcaC06g35887 Brassica carinata HOM05D006200 ORTHO05D007569 1.2e-44 183.3 128 69.5
BolC7t41451H Brassica oleracea HOM05D006200 ORTHO05D007569 1.2e-44 183.3 128 69.5
Thhalv10002727m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 1.2e-44 183.3 112 75.9
ClCG02G002790 Citrullus lanatus HOM05D006200 ORTHO05D007569 2.1e-44 182.6 112 77.7
Sed0007295 Sechium edule HOM05D006200 ORTHO05D007569 2.1e-44 182.6 112 75.9
HPP92_012226 Vanilla planifolia HOM05D006200 ORTHO05D007569 2.1e-44 182.6 117 75.2
Nn1g07469 Nelumbo nucifera HOM05D006200 ORTHO05D007569 4.6e-44 181.4 112 75.9
Haze_12649 Corylus avellana HOM05D006200 ORTHO05D007569 6.0e-44 181.0 114 74.6
Carub.0003s2650 Capsella rubella HOM05D006200 ORTHO05D007569 7.9e-44 180.6 112 75.9
Aqoxy4G02230 Aquilegia oxysepala HOM05D006200 ORTHO05D007569 1.3e-43 179.9 114 75.4
Ciclev10017136m.g Citrus clementina HOM05D006200 ORTHO05D007569 1.8e-43 179.5 117 71.8
Cc05_g02100 Coffea canephora HOM05D006200 ORTHO05D007569 2.3e-43 179.1 112 75.0
MD17G1114500 Malus domestica HOM05D006200 ORTHO05D007569 2.3e-43 179.1 112 76.8
SGA_v2.0_scaffold181G39681 Striga asiatica HOM05D006200 ORTHO05D007569 2.3e-43 179.1 112 76.8
CDE07G1212 Ceratophyllum demersum HOM05D006200 ORTHO05D007569 3.0e-43 178.7 112 75.0
Hma1.2p1_0545F.1_g176060 Hydrangea macrophylla HOM05D006200 ORTHO05D007569 3.0e-43 178.7 112 75.9
Nitab4.5_0001774g0080 Nicotiana tabacum HOM05D006200 ORTHO05D007569 5.1e-43 177.9 112 73.2
Rhsim04G0037800 Rhododendron simsii HOM05D006200 ORTHO05D007569 5.1e-43 177.9 112 75.0
CANSAT64G0383 Cannabis sativa HOM05D006200 ORTHO05D007569 6.7e-43 177.6 112 73.2
MELO3C024201.2 Cucumis melo HOM05D006200 ORTHO05D007569 6.7e-43 177.6 119 73.9
Cc02_g04700 Coffea canephora HOM05D006200 ORTHO05D007569 8.7e-43 177.2 112 75.0
Glyma.14G048700 Glycine max HOM05D006200 ORTHO05D007569 8.7e-43 177.2 112 73.2
PGSC0003DMG400006126 Solanum tuberosum HOM05D006200 ORTHO05D007569 8.7e-43 177.2 114 72.8
arahy.Tifrunner.gnm1.ann1.GBED9Y Arachis hypogaea HOM05D006200 ORTHO05D007569 1.1e-42 176.8 112 75.0
CAN.G1036.6 Capsicum annuum HOM05D006200 ORTHO05D007569 1.1e-42 176.8 112 75.0
MD09G1123700 Malus domestica HOM05D006200 ORTHO05D007569 1.1e-42 176.8 112 76.8
Atru.chr6.3355 Acer truncatum HOM05D006200 ORTHO05D007569 1.5e-42 176.4 112 75.0
Manes.13G063700 Manihot esculenta HOM05D006200 ORTHO05D007569 1.5e-42 176.4 112 74.1
Actinidia09782 Actinidia chinensis HOM05D006200 ORTHO05D007569 1.9e-42 176.0 112 74.1
Hma1.2p1_2053F.1_g312740 Hydrangea macrophylla HOM05D006200 ORTHO05D007569 1.9e-42 176.0 112 75.0
Solyc07g047700.4 Solanum lycopersicum HOM05D006200 ORTHO05D007569 1.9e-42 176.0 114 72.8
Cfa014235 Carpinus fangiana HOM05D000160 ORTHO05D000496 2.5e-42 175.6 114 72.8
TPR.G25628 Trifolium pratense HOM05D006200 ORTHO05D007569 2.5e-42 175.6 112 72.3
CiPaw.04G196600 Carya illinoinensis HOM05D006200 ORTHO05D007569 3.3e-42 175.3 112 73.2
Oeu040457.1 Olea europaea HOM05D006200 ORTHO05D007569 4.3e-42 174.9 112 72.3
TAR626G0047 Trochodendron aralioides HOM05D006200 ORTHO05D007569 5.6e-42 174.5 112 72.3
Glyma.02G268700 Glycine max HOM05D006200 ORTHO05D007569 7.4e-42 174.1 112 71.4
CSS0021565 Camellia sinensis var. sinensis HOM05D006200 ORTHO05D007569 9.6e-42 173.7 112 72.3
Cpa.g.sc136.18 Carica papaya HOM05D006200 ORTHO05D007569 1.3e-41 173.3 112 73.2
PSO675G7132 Papaver somniferum HOM05D006200 ORTHO05D007569 1.3e-41 173.3 112 73.2
Sopen07g024150 Solanum pennellii HOM05D006200 ORTHO05D007569 1.3e-41 173.3 112 72.3
LjContig00029g0002447 Lotus japonicus HOM05D006200 ORTHO05D007569 1.6e-41 172.9 112 73.2
QL08p028355 Quercus lobata HOM05D006200 ORTHO05D007569 1.6e-41 172.9 111 73.0
FvH4_6g40890 Fragaria vesca HOM05D006200 ORTHO05D007569 2.1e-41 172.6 112 74.1
Dinv05360 Davidia involucrata HOM05D006200 ORTHO05D007569 2.8e-41 172.2 112 73.2
Lalb_Chr04g0250001 Lupinus albus HOM05D006200 ORTHO05D007569 2.8e-41 172.2 112 74.1
Lsat_1_v5_gn_5_121761 Lactuca sativa HOM05D006200 ORTHO05D007569 3.7e-41 171.8 112 72.3
Psat2g026360 Pisum sativum HOM05D006200 ORTHO05D007569 3.7e-41 171.8 112 71.4
FAN02G1931 Fragaria x ananassa HOM05D006200 ORTHO05D007569 6.2e-41 171.0 112 73.2
Manes.12G061800 Manihot esculenta HOM05D006200 ORTHO05D007569 6.2e-41 171.0 121 68.6
Medtr5g085420 Medicago truncatula HOM05D006200 ORTHO05D007569 6.2e-41 171.0 112 70.5
Duzib138G0810 Durio zibethinus HOM05D006200 ORTHO05D007569 8.1e-41 170.6 115 68.7
Thecc.01G190500 Theobroma cacao HOM05D006200 ORTHO05D007569 8.1e-41 170.6 115 70.4
Os03g0751000 Oryza sativa ssp. japonica HOM05D006200 ORTHO05D007569 1.1e-40 170.2 111 72.1
RcHm_v2.0_Chr2g0156461 Rosa chinensis HOM05D006200 ORTHO05D007569 1.1e-40 170.2 112 73.2
Gohir.D07G172300 Gossypium hirsutum HOM05D006200 ORTHO05D007569 1.4e-40 169.9 115 68.7
Gorai.001G192600 Gossypium raimondii HOM05D006200 ORTHO05D007569 1.4e-40 169.9 115 68.7
Zm00001eb057520 Zea mays HOM05D006200 ORTHO05D007569 1.4e-40 169.9 111 70.3
Migut.M00041 Erythranthe guttata HOM05D006200 ORTHO05D007569 1.8e-40 169.5 112 73.2
PSO541G4622 Papaver somniferum HOM05D006200 ORTHO05D007569 1.8e-40 169.5 112 72.3
Rhsim02G0017500 Rhododendron simsii HOM05D006200 ORTHO05D007569 2.4e-40 169.1 112 70.5
SalBow7G0450 Salvia bowleyana HOM05D006200 ORTHO05D007569 3.1e-40 168.7 112 70.5
Gohir.A07G167000 Gossypium hirsutum HOM05D006200 ORTHO05D007569 5.3e-40 167.9 115 67.8
HanXRQChr10g0306841 Helianthus annuus HOM05D006200 ORTHO05D007569 5.3e-40 167.9 112 70.5
Sabra14G0125300 Salix brachista HOM05D006200 ORTHO05D007569 2.0e-39 166.0 139 60.4
Aa31sc107G30 Aethionema arabicum HOM05D006200 ORTHO05D007569 9.9e-39 163.7 141 59.6
FAN09G2038 Fragaria x ananassa HOM05D006200 ORTHO05D007569 2.2e-38 162.5 127 65.4
FAN05G3226 Fragaria x ananassa HOM05D006200 ORTHO05D007569 6.4e-38 161.0 127 64.6
FAN14G5749 Fragaria x ananassa HOM05D006200 ORTHO05D007569 6.4e-38 161.0 127 64.6
GSVIVG01030518001 Vitis vinifera HOM05D006200 ORTHO05D007569 8.4e-38 160.6 107 68.2
Mapoly0007s0279 Marchantia polymorpha HOM05D006200 ORTHO05D007569 1.1e-37 160.2 108 70.4
GSVIVG01030523001 Vitis vinifera HOM05D006200 ORTHO05D007569 1.1e-37 160.2 107 68.2
vmacro09406 Vaccinium macrocarpon HOM05D006200 ORTHO05D007569 3.2e-37 158.7 145 56.6
MBI16_g28733_MAGBIO Magnolia biondii HOM05D006200 ORTHO05D007569 4.2e-37 158.3 99 73.7
Lj8A134G80 Lonicera japonica HOM05D006200 ORTHO05D007569 5.5e-37 157.9 98 78.6
Eucgr.A01040 Eucalyptus grandis HOM05D006200 ORTHO05D007569 3.5e-36 155.2 98 76.5
Zm00001eb181090 Zea mays HOM05D006200 ORTHO05D007569 7.9e-36 154.1 110 65.5
CSS0018696 Camellia sinensis var. sinensis HOM05D006200 ORTHO05D007569 1.3e-35 153.3 100 73.0
COL.COLO4_33018 Corchorus olitorius HOM05D006200 ORTHO05D007569 1.8e-35 152.9 158 51.9
Pp3c6_18880 Physcomitrium patens HOM05D006200 ORTHO05D007569 3.9e-35 151.8 124 58.9
Zm00001eb025380 Zea mays HOM05D006200 ORTHO05D007569 8.2e-33 144.1 140 52.1
ECA234G3013 Erigeron canadensis HOM05D006200 ORTHO05D007569 3.1e-32 142.1 98 69.4
AUR62029092 Chenopodium quinoa HOM05D006200 ORTHO05D007569 2.6e-31 139.0 96 69.8
SMO356G0472 Selaginella moellendorffii HOM05D006200 ORTHO05D007569 4.9e-30 134.8 89 66.3
Pp3c6_18900 Physcomitrium patens HOM05D006200 ORTHO05D007569 1.6e-28 129.8 98 64.3
CsaV3_7G002590 Cucumis sativus L. HOM05D006200 ORTHO05D007569 3.5e-28 128.6 86 74.4
Phvul.008G213600 Phaseolus vulgaris HOM05D006200 ORTHO05D007569 6.0e-28 127.9 79 74.7
arahy.Tifrunner.gnm1.ann1.HJ95Y2 Arachis hypogaea HOM05D006200 ORTHO05D007569 1.0e-27 127.1 79 74.7
DCAR_021101 Daucus carota HOM05D006200 ORTHO05D007569 1.8e-27 126.3 79 73.4
Zm00001eb402120 Zea mays HOM05D006200 ORTHO05D007569 1.8e-27 126.3 109 56.0
MSTRG.6639 Avicennia marina HOM05D006200 ORTHO05D007569 2.2e-25 119.4 82 73.2
Thhalv10009367m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 2.4e-24 115.9 78 69.2
Thhalv10016039m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 5.9e-23 111.3 64 75.0
Thhalv10023849m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 1.0e-22 110.5 64 75.0
PGR042G1757 Punica granatum HOM05D006200 ORTHO05D007569 1.0e-22 110.5 66 75.8
Thhalv10027363m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 8.5e-22 107.5 64 73.4
Zm00001eb414470 Zea mays HOM05D006200 ORTHO05D007569 2.5e-21 105.9 69 73.9
Zm00001eb093000 Zea mays HOM05D006200 ORTHO05D007569 5.5e-21 104.8 109 48.6
AagrBONN_evm.TU.Sc2ySwM_368.977 Anthoceros agrestis HOM05D006200 ORTHO05D007569 1.2e-20 103.6 67 64.2
SHI10134 Sapria himalayana HOM05D006200 ORTHO05D007569 1.2e-20 103.6 85 56.5
AUR62015021 Chenopodium quinoa HOM05D006200 ORTHO05D007569 6.1e-20 101.3 70 65.7
Cre12.g543050 Chlamydomonas reinhardtii HOM05D006200 ORTHO05D007569 1.1e-18 97.1 108 40.7
Ah.01g013830 Amaranthus hybridus HOM05D004982 ORTHO05D007569 1.4e-16 90.1 63 66.7
Pp3c16_4930 Physcomitrium patens HOM05D006200 ORTHO05D007569 9.1e-16 87.4 69 60.9
Pp3c16_5110 Physcomitrium patens HOM05D006200 ORTHO05D007569 9.1e-16 87.4 69 60.9
MD17G1249100 Malus domestica HOM05D006200 ORTHO05D007569 6.5e-14 81.3 50 78.0
Hund21568 Selenicereus undatus HOM05D006200 ORTHO05D007569 1.9e-13 79.7 155 39.4
Zm00001eb125940 Zea mays HOM05D000001 ORTHO05D007569 3.0e-11 72.4 45 73.3
Aqoxy5G00520 Aquilegia oxysepala HOM05D006200 ORTHO05D007569 4.4e-10 68.6 40 75.0
C03p34670 Brassica napus HOM05D006200 ORTHO05D007569 7.7e-07 57.8 50 64.0
BolC3t15778H Brassica oleracea HOM05D006200 ORTHO05D007569 7.7e-07 57.8 50 64.0


User provided reference genes

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