Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07643 Sequoiadendron giganteum HOM05D006031 ORTHO05D007417 2.4e-43 178.7 111 100.0
Nn2g11655 Nelumbo nucifera HOM05D006031 ORTHO05D007417 2.2e-20 102.4 65 70.8
Prupe.7G225500 Prunus persica HOM05D006031 ORTHO05D007417 2.9e-20 102.1 76 60.5
COL.COLO4_34809 Corchorus olitorius HOM05D006031 ORTHO05D007417 4.9e-20 101.3 65 70.8
Thhalv10026253m.g Eutrema salsugineum HOM05D006031 ORTHO05D007417 6.5e-20 100.9 65 69.2
Sp7g26830 Schrenkiella parvula HOM05D006031 ORTHO05D007417 6.5e-20 100.9 65 69.2
Sc18g0001360 Simmondsia chinensis HOM05D006031 ORTHO05D007417 6.5e-20 100.9 65 67.7
A01p09080 Brassica napus HOM05D006031 ORTHO05D007417 8.4e-20 100.5 65 69.2
Actinidia20400 Actinidia chinensis HOM05D006031 ORTHO05D007417 1.1e-19 100.1 72 65.3
AT4G28830 Arabidopsis thaliana HOM05D006031 ORTHO05D007417 1.1e-19 100.1 65 67.7
BcaC06g32602 Brassica carinata HOM05D006031 ORTHO05D007417 1.1e-19 100.1 65 67.7
BcaC09g51657 Brassica carinata HOM05D006031 ORTHO05D007417 1.1e-19 100.1 65 67.7
A03p58440 Brassica napus HOM05D006031 ORTHO05D007417 1.1e-19 100.1 65 67.7
C01p10630 Brassica napus HOM05D006031 ORTHO05D007417 1.1e-19 100.1 65 67.7
C07p56460 Brassica napus HOM05D006031 ORTHO05D007417 1.1e-19 100.1 65 67.7
BolC1t01025H Brassica oleracea HOM05D006031 ORTHO05D007417 1.1e-19 100.1 65 67.7
BolC7t46125H Brassica oleracea HOM05D006031 ORTHO05D007417 1.1e-19 100.1 65 67.7
BraA01t00856Z Brassica rapa HOM05D006031 ORTHO05D007417 1.1e-19 100.1 65 67.7
BraA03t14904Z Brassica rapa HOM05D006031 ORTHO05D007417 1.1e-19 100.1 65 67.7
Ca_25548_v3 Cicer arietinum L. HOM05D006031 ORTHO05D007417 1.1e-19 100.1 65 70.8
HanXRQChr17g0570151 Helianthus annuus HOM05D006031 ORTHO05D007417 1.1e-19 100.1 65 69.2
BcaNung01361 Brassica carinata HOM05D006031 ORTHO05D007417 1.4e-19 99.8 64 68.8
PGR102G2811 Punica granatum HOM05D006031 ORTHO05D007417 1.4e-19 99.8 71 63.4
Aa31LG2G21560 Aethionema arabicum HOM05D006031 ORTHO05D007417 1.9e-19 99.4 65 66.2
Carub.0007s1181 Capsella rubella HOM05D006031 ORTHO05D007417 1.9e-19 99.4 65 67.7
Cpa.g.sc12.30 Carica papaya HOM05D006031 ORTHO05D007417 1.9e-19 99.4 65 70.8
ECA234G3380 Erigeron canadensis HOM05D006031 ORTHO05D007417 1.9e-19 99.4 65 69.2
Nitab4.5_0000010g0020 Nicotiana tabacum HOM05D006031 ORTHO05D007417 1.9e-19 99.4 72 63.9
PSO566G0179 Papaver somniferum HOM05D006031 ORTHO05D007417 1.9e-19 99.4 72 62.5
THA.LOC104804018 Tarenaya hassleriana HOM05D006031 ORTHO05D007417 1.9e-19 99.4 65 67.7
TPR.G34905 Trifolium pratense HOM05D006031 ORTHO05D007417 1.9e-19 99.4 65 69.2
Ah.09g230920 Amaranthus hybridus HOM05D006031 ORTHO05D007417 2.5e-19 99.0 72 62.5
EL10Ac8g18430 Beta vulgaris HOM05D006031 ORTHO05D007417 2.5e-19 99.0 65 67.7
AL7G23660 Arabidopsis lyrata HOM05D006031 ORTHO05D007417 3.2e-19 98.6 65 67.7
Migut.K00493 Erythranthe guttata HOM05D006031 ORTHO05D007417 3.2e-19 98.6 64 67.2
Lsat_1_v5_gn_4_6541 Lactuca sativa HOM05D006031 ORTHO05D007417 3.2e-19 98.6 65 67.7
Glyma.01G145300 Glycine max HOM05D006031 ORTHO05D007417 4.2e-19 98.2 65 69.2
Medtr1g035260 Medicago truncatula HOM05D006031 ORTHO05D007417 4.2e-19 98.2 65 67.7
PSO782G0755 Papaver somniferum HOM05D006031 ORTHO05D007417 4.2e-19 98.2 72 61.1
Mapoly0136s0020 Marchantia polymorpha HOM05D006031 ORTHO05D007417 5.5e-19 97.8 65 69.2
Nitab4.5_0000952g0030 Nicotiana tabacum HOM05D006031 ORTHO05D007417 5.5e-19 97.8 72 62.5
QL02p044744 Quercus lobata HOM05D006031 ORTHO05D007417 5.5e-19 97.8 64 67.2
RcHm_v2.0_Chr2g0091271 Rosa chinensis HOM05D006031 ORTHO05D007417 5.5e-19 97.8 65 66.2
MBI04_g14932_MAGBIO Magnolia biondii HOM05D006031 ORTHO05D007417 7.1e-19 97.4 65 67.7
Sopen12g002000 Solanum pennellii HOM05D006031 ORTHO05D007417 7.1e-19 97.4 72 61.1
TAR624G0502 Trochodendron aralioides HOM05D006031 ORTHO05D007417 7.1e-19 97.4 65 67.7
Peaxi162Scf00539g00717 Petunia axillaris HOM05D006031 ORTHO05D007417 9.3e-19 97.1 72 62.5
AUR62021455 Chenopodium quinoa HOM05D006031 ORTHO05D007417 1.2e-18 96.7 71 64.8
Dinv41637 Davidia involucrata HOM05D006031 ORTHO05D007417 1.2e-18 96.7 65 67.7
Gorai.010G073700 Gossypium raimondii HOM05D006031 ORTHO05D007417 1.2e-18 96.7 65 66.2
Hma1.2p1_0945F.1_g240050 Hydrangea macrophylla HOM05D006031 ORTHO05D007417 1.2e-18 96.7 65 67.7
Hma1.2p1_0945F.1_g240060 Hydrangea macrophylla HOM05D006031 ORTHO05D007417 1.2e-18 96.7 65 67.7
MD02G1057400 Malus domestica HOM05D006031 ORTHO05D007417 1.2e-18 96.7 72 62.5
SalBow3G0984 Salvia bowleyana HOM05D006031 ORTHO05D007417 1.2e-18 96.7 64 67.2
arahy.Tifrunner.gnm1.ann1.P4D2XC Arachis hypogaea HOM05D006031 ORTHO05D007417 1.6e-18 96.3 65 69.2
Lalb_Chr22g0352651 Lupinus albus HOM05D006031 ORTHO05D007417 1.6e-18 96.3 64 70.3
unitig_62.g23476 Utricularia gibba HOM05D006031 ORTHO05D007417 1.6e-18 96.3 65 66.2
VMungo0464G0135 Vigna mungo HOM05D006031 ORTHO05D007417 1.6e-18 96.3 65 67.7
GSVIVG01015348001 Vitis vinifera HOM05D006031 ORTHO05D007417 1.6e-18 96.3 72 61.1
Atru.chr7.1388 Acer truncatum HOM05D006031 ORTHO05D007417 2.1e-18 95.9 65 66.2
Aqoxy7G01527 Aquilegia oxysepala HOM05D006031 ORTHO05D007417 2.1e-18 95.9 65 66.2
arahy.Tifrunner.gnm1.ann1.4UU729 Arachis hypogaea HOM05D006031 ORTHO05D007417 2.1e-18 95.9 65 69.2
CAN.G478.5 Capsicum annuum HOM05D006031 ORTHO05D007417 2.1e-18 95.9 72 61.1
CiPaw.03G228000 Carya illinoinensis HOM05D006031 ORTHO05D007417 2.1e-18 95.9 65 66.2
Ciclev10009448m.g Citrus clementina HOM05D006031 ORTHO05D007417 2.1e-18 95.9 71 63.4
Gohir.D06G063200 Gossypium hirsutum HOM05D006031 ORTHO05D007417 2.1e-18 95.9 65 66.2
Thecc.09G105700 Theobroma cacao HOM05D006031 ORTHO05D007417 2.1e-18 95.9 65 67.7
CANSAT56G1289 Cannabis sativa HOM05D006031 ORTHO05D007417 2.7e-18 95.5 71 63.4
FAN26G0948 Fragaria x ananassa HOM05D006031 ORTHO05D007417 2.7e-18 95.5 65 66.2
FAN26G3395 Fragaria x ananassa HOM05D006031 ORTHO05D007417 2.7e-18 95.5 65 66.2
Gohir.A06G064600 Gossypium hirsutum HOM05D006031 ORTHO05D007417 2.7e-18 95.5 65 64.6
Solyc12g006030.2 Solanum lycopersicum HOM05D006031 ORTHO05D007417 2.7e-18 95.5 72 61.1
FvH4_1g05640 Fragaria vesca HOM05D006031 ORTHO05D007417 3.5e-18 95.1 65 64.6
CDE02G2180 Ceratophyllum demersum HOM05D006031 ORTHO05D007417 4.6e-18 94.7 65 66.2
Cc06_g10050 Coffea canephora HOM05D006031 ORTHO05D007417 4.6e-18 94.7 65 64.6
SMO164G0018 Selaginella moellendorffii HOM05D006031 ORTHO05D007417 4.6e-18 94.7 64 67.2
SMO304G0145 Selaginella moellendorffii HOM05D006031 ORTHO05D007417 4.6e-18 94.7 64 67.2
Dinv41633 Davidia involucrata HOM05D006031 ORTHO05D007417 6.0e-18 94.4 65 67.7
Eucgr.C03802 Eucalyptus grandis HOM05D006031 ORTHO05D007417 6.0e-18 94.4 65 66.2
FAN23G2797 Fragaria x ananassa HOM05D006031 ORTHO05D007417 6.0e-18 94.4 65 64.6
Phvul.004G168000 Phaseolus vulgaris HOM05D006031 ORTHO05D007417 7.9e-18 94.0 65 66.2
MELO3C004569.2 Cucumis melo HOM05D006031 ORTHO05D007417 1.0e-17 93.6 72 58.3
Sed0012983 Sechium edule HOM05D006031 ORTHO05D007417 1.0e-17 93.6 72 59.7
CsaV3_2G002120 Cucumis sativus L. HOM05D006031 ORTHO05D007417 1.8e-17 92.8 72 58.3
Pp3c6_12910 Physcomitrium patens HOM05D006031 ORTHO05D007417 1.8e-17 92.8 65 61.5
HPP92_005270 Vanilla planifolia HOM05D006031 ORTHO05D007417 1.8e-17 92.8 64 65.6
ATR0315G117 Amborella trichopoda HOM05D006031 ORTHO05D007417 2.3e-17 92.4 64 65.6
ClCG06G015420 Citrullus lanatus HOM05D006031 ORTHO05D007417 2.3e-17 92.4 72 58.3
Sabra18G0072100 Salix brachista HOM05D006031 ORTHO05D007417 2.3e-17 92.4 65 63.1
Hund26230 Selenicereus undatus HOM05D006031 ORTHO05D007417 2.3e-17 92.4 72 59.7
Haze_25783 Corylus avellana HOM05D006031 ORTHO05D007417 3.0e-17 92.0 64 62.5
Manes.03G024000 Manihot esculenta HOM05D006031 ORTHO05D007417 3.0e-17 92.0 65 63.1
Os06g0162600 Oryza sativa ssp. japonica HOM05D006031 ORTHO05D007417 3.0e-17 92.0 65 61.5
Potri.018G083800 Populus trichocarpa HOM05D006031 ORTHO05D007417 3.9e-17 91.7 65 61.5
TWI63G0954 Tripterygium wilfordii HOM05D006031 ORTHO05D007417 3.9e-17 91.7 71 57.7
Zm00001eb271350 Zea mays HOM05D006031 ORTHO05D007417 3.9e-17 91.7 64 64.1
Zm00001eb271370 Zea mays HOM05D006031 ORTHO05D007417 3.9e-17 91.7 64 64.1
Zm00001eb442390 Zea mays HOM05D006031 ORTHO05D007417 3.9e-17 91.7 64 64.1
AUR62010942 Chenopodium quinoa HOM05D006031 ORTHO05D007417 5.1e-17 91.3 67 64.2
Cfa003225 Carpinus fangiana HOM05D006031 ORTHO05D007417 6.7e-17 90.9 65 61.5
AagrBONN_evm.TU.Sc2ySwM_228.3645 Anthoceros agrestis HOM05D006031 ORTHO05D007417 1.9e-16 89.4 64 67.2
SGA_v2.0_scaffold387G50523 Striga asiatica HOM05D006031 ORTHO05D007417 1.3e-15 86.7 64 60.9
arahy.Tifrunner.gnm1.ann1.PEIA6U Arachis hypogaea HOM05D006031 ORTHO05D007417 2.8e-15 85.5 82 54.9
ClCG11G002340 Citrullus lanatus HOM05D006031 ORTHO05D007417 1.2e-13 80.1 93 45.2
Cre08.g384700 Chlamydomonas reinhardtii HOM05D006031 ORTHO05D007417 4.5e-13 78.2 63 55.6
Psat1g044640 Pisum sativum HOM05D006031 ORTHO05D007417 1.0e-12 77.0 47 78.7
vmacro10877 Vaccinium macrocarpon HOM05D006031 ORTHO05D007417 2.2e-12 75.9 44 77.3
MSTRG.26365 Avicennia marina HOM05D006031 ORTHO05D007417 3.8e-12 75.1 45 75.6
CBR_g49195 Chara braunii HOM05D005459 ORTHO05D006751 3.8e-12 75.1 55 61.8
Lj2g0026722 Lotus japonicus HOM05D006031 ORTHO05D007417 3.8e-12 75.1 44 79.5
CARHR236620 Cardamine hirsuta HOM05D006031 ORTHO05D007417 6.5e-12 74.3 44 77.3
VMungo0464G0776 Vigna mungo HOM05D000002 ORTHO05D000001 8.5e-12 73.9 44 79.5
MCO05G480 Micromonas commoda HOM05D006031 ORTHO05D007417 1.1e-11 73.6 72 51.4
Duzib150G0325 Durio zibethinus HOM05D006031 ORTHO05D007417 1.9e-11 72.8 44 75.0
CSS0004856 Camellia sinensis var. sinensis HOM05D006031 ORTHO05D007417 4.2e-11 71.6 73 52.1
Actinidia09434 Actinidia chinensis HOM05D006031 ORTHO05D007417 2.1e-10 69.3 75 48.0
PRCOL_00003743 Prasinoderma coloniale HOM05D006031 ORTHO05D007417 1.8e-09 66.2 64 45.3
Rhsim05G0043800 Rhododendron simsii HOM05D006031 ORTHO05D000070 1.8e-09 66.2 65 50.8
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-08 63.5 38 76.3
Medtr6g087210 Medicago truncatula HOM05D006031 ORTHO05D007417 5.7e-08 61.2 48 62.5
PRCOL_00005480 Prasinoderma coloniale HOM05D006031 ORTHO05D007417 2.2e-07 59.3 72 40.3
Haze_26211 Corylus avellana HOM05D006031 ORTHO05D007417 4.8e-07 58.2 66 47.0
Haze_27462 Corylus avellana HOM05D006031 ORTHO05D007417 4.8e-07 58.2 66 47.0
PGSC0003DMG400013889 Solanum tuberosum HOM05D000011 ORTHO05D007417 4.1e-06 55.1 41 58.5
DCAR_012059 Daucus carota HOM05D006031 ORTHO05D007417 5.3e-06 54.7 31 71.0


User provided reference genes

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