Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07586 Sequoiadendron giganteum HOM05D005250 ORTHO05D006342 1.4e-108 396.4 204 100.0
Nn7g36775 Nelumbo nucifera HOM05D005250 ORTHO05D006342 5.3e-52 208.4 167 61.1
TAR623G0863 Trochodendron aralioides HOM05D005250 ORTHO05D006342 1.0e-50 204.1 167 60.5
MBI19_g36132_MAGBIO Magnolia biondii HOM05D005250 ORTHO05D006342 1.7e-50 203.4 167 59.9
ATR1096G147 Amborella trichopoda HOM05D005250 ORTHO05D006342 6.5e-50 201.4 167 58.7
Gohir.D02G131600 Gossypium hirsutum HOM05D005250 ORTHO05D006342 6.5e-50 201.4 169 58.6
Sed0000568 Sechium edule HOM05D005250 ORTHO05D006342 6.5e-50 201.4 167 59.9
arahy.Tifrunner.gnm1.ann1.78R55B Arachis hypogaea HOM05D005250 ORTHO05D006342 1.9e-49 199.9 167 60.5
COL.COLO4_27807 Corchorus olitorius HOM05D005250 ORTHO05D002390 1.9e-49 199.9 167 59.3
Os01g0265900 Oryza sativa ssp. japonica HOM05D005250 ORTHO05D006342 1.9e-49 199.9 167 58.7
ECA233G0908 Erigeron canadensis HOM05D005250 ORTHO05D006342 2.5e-49 199.5 167 58.7
PSO339G6010 Papaver somniferum HOM05D005250 ORTHO05D006342 3.2e-49 199.1 166 58.4
THA.LOC104805209 Tarenaya hassleriana HOM05D005250 ORTHO05D006342 3.2e-49 199.1 167 58.7
Gorai.005G147500 Gossypium raimondii HOM05D005250 ORTHO05D006342 4.2e-49 198.7 167 58.7
HanXRQChr12g0365051 Helianthus annuus HOM05D005250 ORTHO05D006342 4.2e-49 198.7 167 58.7
Sed0024712 Sechium edule HOM05D005250 ORTHO05D006342 4.2e-49 198.7 167 58.7
Gohir.A03G106400 Gossypium hirsutum HOM05D005250 ORTHO05D006342 5.5e-49 198.4 167 58.7
Lsat_1_v5_gn_8_35661 Lactuca sativa HOM05D005250 ORTHO05D006342 5.5e-49 198.4 167 57.5
Lj2g0021011 Lotus japonicus HOM05D005250 ORTHO05D006342 5.5e-49 198.4 167 59.9
PSO384G2373 Papaver somniferum HOM05D005250 ORTHO05D006342 5.5e-49 198.4 166 58.4
Rhsim09G0122300 Rhododendron simsii HOM05D005250 ORTHO05D006342 5.5e-49 198.4 171 56.1
unitig_26.g10282 Utricularia gibba HOM05D005250 ORTHO05D006342 7.1e-49 198.0 167 59.3
vmacro10476 Vaccinium macrocarpon HOM05D005250 ORTHO05D006342 9.3e-49 197.6 172 57.0
CANSAT64G2789 Cannabis sativa HOM05D005250 ORTHO05D006342 1.2e-48 197.2 167 57.5
CAN.G263.5 Capsicum annuum HOM05D005250 ORTHO05D006342 1.2e-48 197.2 167 58.7
Hma1.2p1_1307F.1_g274740 Hydrangea macrophylla HOM05D005250 ORTHO05D006342 1.2e-48 197.2 168 56.5
Psat4g118880 Pisum sativum HOM05D005250 ORTHO05D006342 1.2e-48 197.2 167 58.7
Sopen04g001290 Solanum pennellii HOM05D005250 ORTHO05D006342 1.2e-48 197.2 167 58.7
TPR.G3346 Trifolium pratense HOM05D005250 ORTHO05D006342 1.2e-48 197.2 167 59.3
Ciclev10032293m.g Citrus clementina HOM05D005250 ORTHO05D006342 1.6e-48 196.8 167 58.1
Migut.L01163 Erythranthe guttata HOM05D005250 ORTHO05D006342 1.6e-48 196.8 167 58.1
PGR119G1921 Punica granatum HOM05D005250 ORTHO05D006342 1.6e-48 196.8 167 57.5
PGSC0003DMG400001920 Solanum tuberosum HOM05D005250 ORTHO05D006342 1.6e-48 196.8 167 58.7
GSVIVG01010104001 Vitis vinifera HOM05D005250 ORTHO05D006342 1.6e-48 196.8 167 58.7
Atru.chr11.1561 Acer truncatum HOM05D005250 ORTHO05D006342 2.1e-48 196.4 167 57.5
CARHR146190 Cardamine hirsuta HOM05D005250 ORTHO05D006342 2.1e-48 196.4 167 57.5
Medtr8g066180 Medicago truncatula HOM05D005250 ORTHO05D006342 2.1e-48 196.4 167 58.7
Nitab4.5_0000591g0010 Nicotiana tabacum HOM05D005250 ORTHO05D006342 2.1e-48 196.4 169 58.6
Ah.02g126720 Amaranthus hybridus HOM05D005250 ORTHO05D006342 2.7e-48 196.1 167 58.1
Sp2g14610 Schrenkiella parvula HOM05D005250 ORTHO05D006342 2.7e-48 196.1 167 58.1
BcaC04g21447 Brassica carinata HOM05D005250 ORTHO05D006342 3.5e-48 195.7 167 58.1
C09p31650 Brassica napus HOM05D005250 ORTHO05D006342 3.5e-48 195.7 167 58.1
Carub.0005s0293 Capsella rubella HOM05D005250 ORTHO05D006342 3.5e-48 195.7 167 58.1
Prupe.1G293300 Prunus persica HOM05D005250 ORTHO05D006342 3.5e-48 195.7 167 58.1
Solyc04g005310.3 Solanum lycopersicum HOM05D005250 ORTHO05D006342 4.6e-48 195.3 166 58.4
AT2G03780 Arabidopsis thaliana HOM05D005250 ORTHO05D006342 6.0e-48 194.9 167 57.5
Thhalv10004726m.g Eutrema salsugineum HOM05D005250 ORTHO05D006342 6.0e-48 194.9 167 57.5
Hma1.2p1_0473F.1_g160080 Hydrangea macrophylla HOM05D005250 ORTHO05D006342 6.0e-48 194.9 167 56.3
Manes.01G024400 Manihot esculenta HOM05D005250 ORTHO05D006342 6.0e-48 194.9 167 58.1
Thecc.02G322900 Theobroma cacao HOM05D005250 ORTHO05D006342 6.0e-48 194.9 167 58.1
EL10Ac6g14674 Beta vulgaris HOM05D005250 ORTHO05D006342 7.9e-48 194.5 167 58.1
BcaB07g30645 Brassica carinata HOM05D005250 ORTHO05D006342 7.9e-48 194.5 167 58.1
A09p24730 Brassica napus HOM05D005250 ORTHO05D000117 7.9e-48 194.5 167 57.5
BraA09t38059Z Brassica rapa HOM05D005250 ORTHO05D000117 7.9e-48 194.5 167 57.5
Cc11_g11570 Coffea canephora HOM05D005250 ORTHO05D006342 7.9e-48 194.5 167 57.5
Lj3A1027G83 Lonicera japonica HOM05D005250 ORTHO05D006342 7.9e-48 194.5 167 58.7
MD16G1056000 Malus domestica HOM05D005250 ORTHO05D006342 7.9e-48 194.5 167 57.5
AUR62003059 Chenopodium quinoa HOM05D005250 ORTHO05D006342 1.0e-47 194.1 168 57.7
Psat4g092800 Pisum sativum HOM05D005250 ORTHO05D006342 1.0e-47 194.1 167 58.7
Lalb_Chr16g0391841 Lupinus albus HOM05D005250 ORTHO05D006342 1.3e-47 193.7 167 59.3
SalBow2G3543 Salvia bowleyana HOM05D005250 ORTHO05D006342 1.3e-47 193.7 167 56.3
AL5G13570 Arabidopsis lyrata HOM05D005250 ORTHO05D006342 1.8e-47 193.4 167 56.9
arahy.Tifrunner.gnm1.ann1.F58IRU Arachis hypogaea HOM05D005250 ORTHO05D006342 1.8e-47 193.4 174 58.0
CsaV3_6G033890 Cucumis sativus L. HOM05D005250 ORTHO05D006342 1.8e-47 193.4 167 58.1
CiPaw.06G094800 Carya illinoinensis HOM05D005250 ORTHO05D006342 2.3e-47 193.0 167 55.7
FAN12G3515 Fragaria x ananassa HOM05D005250 ORTHO05D006342 2.3e-47 193.0 167 57.5
TWI79G0919 Tripterygium wilfordii HOM05D005250 ORTHO05D006342 2.3e-47 193.0 167 56.9
Actinidia13405 Actinidia chinensis HOM05D005250 ORTHO05D006342 3.0e-47 192.6 167 56.9
ClCG08G010590 Citrullus lanatus HOM05D005250 ORTHO05D006342 3.0e-47 192.6 162 58.6
FAN22G1621 Fragaria x ananassa HOM05D000202 ORTHO05D006342 3.0e-47 192.6 167 57.5
Glyma.11G011400 Glycine max HOM05D005250 ORTHO05D006342 3.0e-47 192.6 167 57.5
Phvul.003G280700 Phaseolus vulgaris HOM05D005250 ORTHO05D006342 3.0e-47 192.6 167 57.5
Potri.010G138300 Populus trichocarpa HOM05D005250 ORTHO05D006342 3.0e-47 192.6 167 55.7
RcHm_v2.0_Chr4g0437361 Rosa chinensis HOM05D005250 ORTHO05D006342 3.0e-47 192.6 167 57.5
MELO3C011403.2 Cucumis melo HOM05D005250 ORTHO05D006342 3.9e-47 192.2 167 57.5
FvH4_4g29320 Fragaria vesca HOM05D005250 ORTHO05D006342 3.9e-47 192.2 167 57.5
MD13G1056700 Malus domestica HOM05D005250 ORTHO05D006342 5.1e-47 191.8 167 57.5
FAN17G2738 Fragaria x ananassa HOM05D000202 ORTHO05D006342 6.7e-47 191.4 167 56.9
Peaxi162Scf00873g00111 Petunia axillaris HOM05D005250 ORTHO05D006342 6.7e-47 191.4 162 58.6
Ca_22871_v3 Cicer arietinum L. HOM05D005250 ORTHO05D006342 1.1e-46 190.7 167 57.5
Zm00001eb333230 Zea mays HOM05D005250 ORTHO05D006342 1.1e-46 190.7 161 57.1
AUR62007874 Chenopodium quinoa HOM05D005250 ORTHO05D006342 1.5e-46 190.3 187 52.4
Duzib251G0604 Durio zibethinus HOM05D005250 ORTHO05D006342 1.5e-46 190.3 184 54.3
CDE02G4654 Ceratophyllum demersum HOM05D005250 ORTHO05D006342 1.9e-46 189.9 167 55.7
SGA_v2.0_scaffold36G14486 Striga asiatica HOM05D005250 ORTHO05D006342 1.9e-46 189.9 185 54.1
CSS0000657 Camellia sinensis var. sinensis HOM05D005250 ORTHO05D006342 2.5e-46 189.5 167 55.1
Oeu048123.1 Olea europaea HOM05D005250 ORTHO05D006342 2.5e-46 189.5 166 56.6
Eucgr.G02422 Eucalyptus grandis HOM05D005250 ORTHO05D006342 7.4e-46 188.0 167 56.9
MSTRG.778 Avicennia marina HOM05D005250 ORTHO05D006342 9.6e-46 187.6 167 55.1
Sabra10G0106500 Salix brachista HOM05D005250 ORTHO05D006342 2.1e-45 186.4 170 54.7
Aa31LG2G6930 Aethionema arabicum HOM05D005250 ORTHO05D006342 2.8e-45 186.0 163 57.7
Aqoxy2G00415 Aquilegia oxysepala HOM05D005250 ORTHO05D006342 2.8e-45 186.0 195 50.3
BcaC09g49168 Brassica carinata HOM05D005250 ORTHO05D006342 4.8e-45 185.3 170 55.3
Hund25156 Selenicereus undatus HOM05D005250 ORTHO05D006342 4.8e-45 185.3 169 53.8
Sc11g0002640 Simmondsia chinensis HOM05D005250 ORTHO05D006342 1.4e-44 183.7 167 53.9
BcaC04g19887 Brassica carinata HOM05D005250 ORTHO05D006342 3.4e-43 179.1 165 54.5
DCAR_007208 Daucus carota HOM05D005250 ORTHO05D006342 4.5e-43 178.7 167 53.9
SEGI_14635 Sequoiadendron giganteum HOM05D005250 ORTHO05D006342 1.3e-42 177.2 175 61.7
Dinv34022 Davidia involucrata HOM05D005250 ORTHO05D006342 2.5e-41 172.9 142 57.7
Mapoly0009s0086 Marchantia polymorpha HOM05D005250 ORTHO05D006342 7.2e-41 171.4 183 46.4
AagrBONN_evm.TU.Sc2ySwM_117.326 Anthoceros agrestis HOM05D005250 ORTHO05D006342 2.1e-40 169.9 181 51.4
SHI16015 Sapria himalayana HOM05D005250 ORTHO05D006342 4.6e-40 168.7 168 51.2
SMO236G0018 Selaginella moellendorffii HOM05D005250 ORTHO05D006342 1.0e-39 167.5 167 53.3
BcaC06g35305 Brassica carinata HOM05D005250 ORTHO05D006342 1.3e-39 167.2 155 54.8
Nitab4.5_0000014g0530 Nicotiana tabacum HOM05D005250 ORTHO05D006342 2.8e-37 159.5 167 51.5
BolC4t23671H Brassica oleracea HOM05D005250 ORTHO05D006342 1.8e-36 156.8 168 51.2
arahy.Tifrunner.gnm1.ann1.LMD1JY Arachis hypogaea HOM05D005250 ORTHO05D006342 6.9e-36 154.8 194 45.9
Haze_11860 Corylus avellana HOM05D005250 ORTHO05D006342 7.7e-35 151.4 180 46.1
EL10Ac8g19720 Beta vulgaris HOM05D005250 ORTHO05D006342 4.6e-32 142.1 117 59.0
C04p21460 Brassica napus HOM05D005250 ORTHO05D006342 7.9e-32 141.4 168 48.2
MBI19_g20787_MAGBIO Magnolia biondii HOM05D005250 ORTHO05D006342 8.8e-31 137.9 167 47.9
HPP92_021194 Vanilla planifolia HOM05D005250 ORTHO05D006342 6.9e-28 128.3 167 41.9
C07p17630 Brassica napus HOM05D005250 ORTHO05D006342 1.4e-25 120.6 154 42.9
arahy.Tifrunner.gnm1.ann1.M1Z73T Arachis hypogaea HOM05D005250 ORTHO05D006342 5.5e-25 118.6 169 43.2
SEGI_39770 Sequoiadendron giganteum HOM05D005250 ORTHO05D006342 2.6e-22 109.8 60 90.0
CBR_g489 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-19 100.5 122 41.8
PGSC0003DMG400008670 Solanum tuberosum HOM05D005250 ORTHO05D006342 2.7e-16 89.7 74 55.4
BolC9t57871H Brassica oleracea HOM05D005250 ORTHO05D006342 1.2e-14 84.3 172 35.5
Hma1.2p1_0473F.1_g160090 Hydrangea macrophylla HOM05D005250 ORTHO05D006342 1.1e-12 77.8 59 57.6
SEGI_29071 Sequoiadendron giganteum HOM05D005250 ORTHO05D006342 7.0e-12 75.1 50 76.0
C07p34180 Brassica napus HOM05D005250 ORTHO05D006342 1.2e-08 64.3 179 31.8
RcHm_v2.0_Chr3g0459601 Rosa chinensis HOM05D005250 ORTHO05D006342 2.1e-08 63.5 59 50.8
BolC7t43944H Brassica oleracea HOM05D005250 ORTHO05D006342 3.6e-08 62.8 71 45.1
A05p26370 Brassica napus HOM05D005250 ORTHO05D006342 2.3e-07 60.1 89 38.2
C09p61860 Brassica napus HOM05D005250 ORTHO05D006342 2.3e-07 60.1 89 38.2
BraA04t18025Z Brassica rapa HOM05D005250 ORTHO05D006342 2.3e-07 60.1 77 42.9
Cfa027242 Carpinus fangiana HOM05D005250 ORTHO05D006342 2.3e-07 60.1 156 28.2
Hma1.2p1_0473F.1_g160070 Hydrangea macrophylla HOM05D005250 ORTHO05D006342 3.0e-07 59.7 51 56.9
C08p18960 Brassica napus HOM05D005250 ORTHO05D006342 4.0e-07 59.3 63 47.6
BolC7t42269H Brassica oleracea HOM05D005250 ORTHO05D006342 6.8e-07 58.5 65 41.5
A07p01490 Brassica napus HOM05D005250 ORTHO05D006342 1.5e-06 57.4 73 43.8
Ah.03g138620 Amaranthus hybridus HOM05D005250 ORTHO05D006342 2.6e-06 56.6 50 52.0
A03p09860 Brassica napus HOM05D001868 ORTHO05D003985 2.6e-06 56.6 47 59.6


User provided reference genes

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