Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07524 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.2e-97 359.8 174 100.0
SEGI_13527 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 4.5e-28 128.6 78 78.2
SEGI_02995 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.0e-24 117.5 78 73.1
SEGI_39219 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 3.4e-23 112.5 78 67.9
SEGI_05851 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 7.5e-23 111.3 78 67.9
SEGI_05852 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 3.1e-21 105.9 78 64.1
SEGI_05129 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 4.1e-21 105.5 78 62.8
SEGI_39193 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 7.0e-21 104.8 70 68.6
SEGI_36452 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.6e-20 103.6 78 61.5
SEGI_05930 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 2.3e-19 99.8 78 60.3
SEGI_37401 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 2.3e-19 99.8 78 60.3
SEGI_07533 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 8.6e-19 97.8 147 42.2
SEGI_06814 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.5e-18 97.1 78 59.0
SEGI_26520 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.5e-18 97.1 78 57.7
SEGI_11045 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.9e-18 96.7 78 57.7
SEGI_23898 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 2.5e-18 96.3 78 56.4
SEGI_26241 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 2.5e-18 96.3 78 56.4
SEGI_12380 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 4.7e-17 92.0 77 54.5
SEGI_29126 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 6.1e-17 91.7 70 60.0
SEGI_35267 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.4e-16 90.5 78 53.8
SEGI_40283 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.4e-16 90.5 78 53.8
SEGI_06983 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 2.3e-16 89.7 112 44.6
SEGI_33904 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 2.3e-16 89.7 78 56.4
SEGI_21873 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 4.0e-16 89.0 80 53.8
SEGI_39695 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 6.8e-16 88.2 78 52.6
SEGI_38724 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 8.9e-16 87.8 78 53.8
SEGI_07872 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.5e-15 87.0 78 51.3
SEGI_16023 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.5e-15 87.0 78 51.3
SEGI_03398 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.2e-12 77.4 77 45.5
SEGI_20009 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 3.5e-12 75.9 77 51.9
SEGI_38894 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 7.8e-12 74.7 77 51.9
SEGI_28226 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.5e-10 70.5 78 41.0
SEGI_13944 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.9e-10 70.1 78 41.0
SEGI_14305 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 2.5e-10 69.7 77 42.9
SEGI_04953 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.6e-09 67.0 69 42.0
SEGI_09713 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 3.6e-09 65.9 78 38.5
SEGI_35824 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 6.2e-09 65.1 79 40.5
SEGI_25502 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 8.0e-09 64.7 78 41.0
SEGI_12070 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.8e-08 63.5 69 39.1
SEGI_10375 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 8.9e-08 61.2 78 38.5
SEGI_25191 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 2.0e-07 60.1 78 38.5
SEGI_33047 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 2.0e-07 60.1 79 39.2
SEGI_24606 Sequoiadendron giganteum HOM05D000114 ORTHO05D000075 1.3e-06 57.4 43 62.8
SEGI_04083 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.7e-06 57.0 76 35.5
SEGI_32340 Sequoiadendron giganteum HOM05D008502 ORTHO05D010717 1.7e-06 57.0 76 35.5
SEGI_39429 Sequoiadendron giganteum HOM05D000114 ORTHO05D000075 1.7e-06 57.0 46 65.2
CANSAT56G0759 Cannabis sativa HOM05D000114 ORTHO05D000075 2.9e-06 56.2 32 84.4
Gohir.A05G278300 Gossypium hirsutum HOM05D000114 ORTHO05D000075 2.9e-06 56.2 32 81.2
Manes.06G090900 Manihot esculenta HOM05D000114 ORTHO05D000075 2.9e-06 56.2 57 52.6
Rhsim05G0230000 Rhododendron simsii HOM05D000114 ORTHO05D000075 2.9e-06 56.2 42 66.7
Atru.chr11.1763 Acer truncatum HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
arahy.Tifrunner.gnm1.ann1.TBDY3T Arachis hypogaea HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
CANSAT54G2244 Cannabis sativa HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
Cpa.g.sc2.303 Carica papaya HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
Cfa011825 Carpinus fangiana HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
CiPaw.13G064500 Carya illinoinensis HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
CiPaw.14G051000 Carya illinoinensis HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
COL.COLO4_11206 Corchorus olitorius HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
Haze_24462 Corylus avellana HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
DCAR_028915 Daucus carota HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
Dinv16663 Davidia involucrata HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
Duzib128G0071 Durio zibethinus HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
Duzib168G1103 Durio zibethinus HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
ECA247G0703 Erigeron canadensis HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
HanXRQChr09g0262011 Helianthus annuus HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
HanXRQChr17g0570851 Helianthus annuus HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 78.1
Lj8A55T85 Lonicera japonica HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
Manes.07G140700 Manihot esculenta HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
Prupe.5G195200 Prunus persica HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
SalBow3G2293 Salvia bowleyana HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 78.1
SEGI_19078 Sequoiadendron giganteum HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
SEGI_19817 Sequoiadendron giganteum HOM05D000114 ORTHO05D000075 3.7e-06 55.8 32 81.2
TAR374G1015 Trochodendron aralioides HOM05D000114 ORTHO05D000075 3.7e-06 55.8 38 68.4
Aqoxy2G00700 Aquilegia oxysepala HOM05D000114 ORTHO05D000075 4.9e-06 55.5 32 84.4
CSS0008650 Camellia sinensis var. sinensis HOM05D000114 ORTHO05D000075 4.9e-06 55.5 38 68.4
CSS0010195 Camellia sinensis var. sinensis HOM05D000114 ORTHO05D000075 4.9e-06 55.5 38 68.4
Ciclev10032524m.g Citrus clementina HOM05D000114 ORTHO05D000075 4.9e-06 55.5 32 84.4
Lsat_1_v5_gn_4_11020 Lactuca sativa HOM05D000114 ORTHO05D000075 4.9e-06 55.5 32 81.2
Lalb_Chr09g0329231 Lupinus albus HOM05D000114 ORTHO05D000075 4.9e-06 55.5 30 86.7
TWI09G1347 Tripterygium wilfordii HOM05D000114 ORTHO05D000075 4.9e-06 55.5 32 84.4
vmacro20366 Vaccinium macrocarpon HOM05D000114 ORTHO05D000075 4.9e-06 55.5 32 78.1
Aqoxy3G03434 Aquilegia oxysepala HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 75.0
Aqoxy4G02392 Aquilegia oxysepala HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
AL2G28670 Arabidopsis lyrata HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 75.0
arahy.Tifrunner.gnm1.ann1.27E6QC Arachis hypogaea HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
arahy.Tifrunner.gnm1.ann1.C0ENLW Arachis hypogaea HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
MSTRG.2339 Avicennia marina HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
MSTRG.713 Avicennia marina HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
CSS0000679 Camellia sinensis var. sinensis HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
CSS0005203 Camellia sinensis var. sinensis HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
CSS0013289 Camellia sinensis var. sinensis HOM05D000114 ORTHO05D000075 6.4e-06 55.1 38 68.4
Carub.0002s1618 Capsella rubella HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 75.0
Cpa.g.sc1.46 Carica papaya HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
CiPaw.01G306200 Carya illinoinensis HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
CDE09G0486 Ceratophyllum demersum HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Ca_12063_v3 Cicer arietinum L. HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
ClCG11G005690 Citrullus lanatus HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
COL.COLO4_08329 Corchorus olitorius HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
COL.COLO4_22944 Corchorus olitorius HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
MELO3C020005.2 Cucumis melo HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Duzib106G1637 Durio zibethinus HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Duzib251G0281 Durio zibethinus HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
Duzib268G1635 Durio zibethinus HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
ECA234G1944 Erigeron canadensis HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
ECA247G1688 Erigeron canadensis HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
Gohir.A03G101900 Gossypium hirsutum HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
Gohir.A13G006600 Gossypium hirsutum HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Gohir.D02G126700 Gossypium hirsutum HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
Gohir.D05G280000 Gossypium hirsutum HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Gohir.D13G006800 Gossypium hirsutum HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Gorai.005G142200 Gossypium raimondii HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
Gorai.009G293500 Gossypium raimondii HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Gorai.013G007000 Gossypium raimondii HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
HanXRQChr07g0203691 Helianthus annuus HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
HanXRQChr08g0210821 Helianthus annuus HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
Lsat_1_v5_gn_2_124880 Lactuca sativa HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Lj1g0023131 Lotus japonicus HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Lalb_Chr17g0340821 Lupinus albus HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
MD01G1166700 Malus domestica HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Manes.01G034500 Manihot esculenta HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
Manes.05G103900 Manihot esculenta HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
Medtr3g094040 Medicago truncatula HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Medtr3g094060 Medicago truncatula HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Phvul.002G083600 Phaseolus vulgaris HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
Phvul.006G077200 Phaseolus vulgaris HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Psat5g069160 Pisum sativum HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Potri.013G154700 Populus trichocarpa HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Prupe.2G263600 Prunus persica HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
QL01p024933 Quercus lobata HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
RcHm_v2.0_Chr1g0372131 Rosa chinensis HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
Sabra13G0124600 Salix brachista HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
SalBow2G2120 Salvia bowleyana HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
SEGI_33394 Sequoiadendron giganteum HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
TPR.G16135 Trifolium pratense HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
VMungo1309G0030 Vigna mungo HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 81.2
GSVIVG01019965001 Vitis vinifera HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
GSVIVG01029411001 Vitis vinifera HOM05D000114 ORTHO05D000075 6.4e-06 55.1 32 78.1
Actinidia31904 Actinidia chinensis HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
arahy.Tifrunner.gnm1.ann1.VYY6KX Arachis hypogaea HOM05D000114 ORTHO05D000075 8.3e-06 54.7 38 68.4
Cfa018928 Carpinus fangiana HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
CiPaw.11G046000 Carya illinoinensis HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
CiPaw.12G012700 Carya illinoinensis HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
CDE02G0696 Ceratophyllum demersum HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
Ca_18824_v3 Cicer arietinum L. HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 81.2
ClCG05G024150 Citrullus lanatus HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
ClCG07G005080 Citrullus lanatus HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
Ciclev10032548m.g Citrus clementina HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
Haze_07312 Corylus avellana HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
MELO3C020143.2 Cucumis melo HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
CsaV3_6G002280 Cucumis sativus L. HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
DCAR_007168 Daucus carota HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
DCAR_027423 Daucus carota HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
DCAR_027424 Daucus carota HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
DCAR_031005 Daucus carota HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
Dinv21842 Davidia involucrata HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
Migut.J00050 Erythranthe guttata HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
FAN07G2478 Fragaria x ananassa HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
FAN17G2505 Fragaria x ananassa HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
FAN22G1067 Fragaria x ananassa HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
HanXRQChr08g0227911 Helianthus annuus HOM05D000114 ORTHO05D000075 8.3e-06 54.7 30 83.3
Lsat_1_v5_gn_8_51000 Lactuca sativa HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 75.0
MBI05_g10769_MAGBIO Magnolia biondii HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
MD06G1195100 Malus domestica HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
MD14G1202100 Malus domestica HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
Manes.06G091300 Manihot esculenta HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 71.9
Oeu055108.1 Olea europaea HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
Phvul.002G170300 Phaseolus vulgaris HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
QL03p068556 Quercus lobata HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
Sabra08G0066000 Salix brachista HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
Sed0006896 Sechium edule HOM05D000114 ORTHO05D000075 8.3e-06 54.7 34 73.5
Sed0017942 Sechium edule HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
Sed0022803 Sechium edule HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
Sed0026672 Sechium edule HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
Thecc.02G343800 Theobroma cacao HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 75.0
TAR622G0283 Trochodendron aralioides HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1
unitig_8.g3195 Utricularia gibba HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 75.0
vmacro09967 Vaccinium macrocarpon HOM05D000114 ORTHO05D000075 8.3e-06 54.7 32 78.1


User provided reference genes

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