Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 9.1e-108 393.7 210 100.0
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 1.1e-47 194.1 205 55.6
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 9.0e-47 191.0 209 54.1
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 2.6e-46 189.5 208 55.8
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 2.6e-46 189.5 207 55.1
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 4.5e-46 188.7 210 52.9
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 4.5e-46 188.7 206 54.4
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 1.7e-45 186.8 206 54.4
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 4.9e-45 185.3 205 53.7
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 8.4e-45 184.5 202 54.0
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 8.4e-45 184.5 207 51.2
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 1.4e-44 183.7 209 51.2
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 1.4e-44 183.7 205 52.7
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 2.4e-44 183.0 210 52.4
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 2.4e-44 183.0 207 52.2
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 3.2e-44 182.6 213 51.6
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 3.2e-44 182.6 210 53.3
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 3.2e-44 182.6 202 53.5
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 4.2e-44 182.2 217 50.7
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 5.4e-44 181.8 205 53.2
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 5.4e-44 181.8 204 50.5
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 7.1e-44 181.4 206 53.4
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 7.1e-44 181.4 222 52.7
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 1.2e-43 180.6 213 54.0
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 1.2e-43 180.6 204 54.4
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.6e-43 180.3 208 53.4
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 1.6e-43 180.3 202 53.0
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 2.1e-43 179.9 207 51.2
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 2.1e-43 179.9 207 49.8
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 3.5e-43 179.1 226 50.0
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 3.5e-43 179.1 208 52.4
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 4.6e-43 178.7 223 49.3
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 6.0e-43 178.3 210 50.0
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 6.0e-43 178.3 208 50.0
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 7.9e-43 177.9 213 50.2
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 1.0e-42 177.6 223 49.3
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 1.8e-42 176.8 203 54.2
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 2.3e-42 176.4 209 50.7
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 3.0e-42 176.0 224 49.1
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 3.0e-42 176.0 209 53.6
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 5.1e-42 175.3 205 49.8
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 5.1e-42 175.3 205 50.2
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 5.1e-42 175.3 205 50.7
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 6.7e-42 174.9 215 51.6
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 8.7e-42 174.5 204 52.0
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 8.7e-42 174.5 205 51.7
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 1.1e-41 174.1 204 49.0
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 1.1e-41 174.1 203 52.2
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 1.1e-41 174.1 204 52.5
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 1.9e-41 173.3 207 49.8
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 2.5e-41 172.9 214 48.6
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 2.5e-41 172.9 204 53.4
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 4.3e-41 172.2 204 50.0
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 5.6e-41 171.8 207 52.2
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 7.4e-41 171.4 212 50.9
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 9.6e-41 171.0 204 51.5
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 9.6e-41 171.0 207 51.2
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 9.6e-41 171.0 212 50.9
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.3e-40 170.6 204 51.5
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 1.6e-40 170.2 208 49.5
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 2.1e-40 169.9 208 52.4
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 2.8e-40 169.5 208 47.1
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 3.7e-40 169.1 209 50.2
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 4.8e-40 168.7 208 51.0
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 4.8e-40 168.7 210 50.0
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 1.8e-39 166.8 208 51.9
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 1.8e-39 166.8 219 48.9
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 5.3e-39 165.2 207 49.8
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 5.3e-39 165.2 213 48.4
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 5.3e-39 165.2 220 48.6
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 1.2e-38 164.1 209 49.3
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 1.2e-38 164.1 209 49.3
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 1.5e-38 163.7 213 47.9
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 1.5e-38 163.7 206 51.0
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 1.5e-38 163.7 208 48.6
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 1.5e-38 163.7 205 48.3
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 2.6e-38 162.9 209 48.8
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 2.6e-38 162.9 209 48.8
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 2.6e-38 162.9 209 49.3
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 5.8e-38 161.8 206 50.5
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 1.3e-37 160.6 210 46.2
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 8.4e-37 157.9 225 46.7
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 4.2e-36 155.6 210 48.1
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 4.2e-36 155.6 210 48.1
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 7.1e-36 154.8 196 50.0
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 9.3e-36 154.5 158 56.3
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 1.6e-35 153.7 204 45.6
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 2.7e-35 152.9 212 46.2
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 4.6e-35 152.1 204 48.5
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 1.8e-34 150.2 204 44.6
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 5.1e-34 148.7 206 45.1
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 7.4e-33 144.8 125 60.0
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 9.6e-33 144.4 154 51.9
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 2.1e-32 143.3 121 61.2
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.1e-31 141.0 157 51.6
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 2.4e-31 139.8 112 63.4
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 4.1e-31 139.0 221 44.8
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 6.9e-31 138.3 120 62.5
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 7.6e-30 134.8 117 62.4
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.2e-27 127.5 209 43.1
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 2.7e-27 126.3 85 71.8
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 6.1e-27 125.2 82 73.2
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 7.9e-27 124.8 215 41.4
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 5.7e-25 118.6 161 46.6
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 7.4e-25 118.2 161 46.0
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.4e-23 114.0 212 40.6
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 1.8e-23 113.6 75 73.3
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 1.7e-21 107.1 211 35.5
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 9.4e-20 101.3 205 39.5
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 8.8e-18 94.7 211 36.0
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 1.1e-15 87.8 134 41.8
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 1.2e-14 84.3 188 35.1
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 1.2e-11 74.3 209 33.5
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 1.6e-11 73.9 147 37.4
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 3.9e-10 69.3 44 72.7
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 1.1e-09 67.8 45 73.3
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.6e-09 66.6 46 67.4
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 2.2e-08 63.5 39 76.9
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 4.8e-08 62.4 149 32.2


User provided reference genes

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