Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 1.1e-192 676.4 336 100.0
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 3.2e-78 296.2 314 50.3
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 3.2e-78 296.2 288 53.5
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 1.2e-77 294.3 288 52.4
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 1.6e-77 293.9 287 53.0
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 1.6e-77 293.9 283 53.7
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 2.1e-77 293.5 287 52.6
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 2.7e-77 293.1 287 53.0
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 2.7e-77 293.1 284 51.8
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 1.3e-76 290.8 285 51.2
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 2.3e-76 290.0 283 51.6
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 3.9e-76 289.3 322 47.5
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 5.1e-76 288.9 286 52.1
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 7.3e-75 285.0 281 53.0
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 2.1e-74 283.5 296 47.3
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 8.1e-74 281.6 274 51.8
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 4.0e-73 279.3 290 49.0
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 6.8e-73 278.5 291 51.9
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 8.9e-73 278.1 295 49.2
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 1.2e-72 277.7 303 47.2
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 1.5e-72 277.3 285 52.6
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 4.4e-72 275.8 287 49.8
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 2.2e-71 273.5 279 51.3
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 3.8e-71 272.7 286 49.7
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 2.4e-70 270.0 278 49.6
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 2.4e-70 270.0 285 48.8
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 9.2e-70 268.1 278 51.1
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 1.2e-69 267.7 288 47.9
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 1.6e-69 267.3 278 51.1
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 1.6e-69 267.3 288 50.0
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 1.7e-68 263.8 276 49.3
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 3.9e-68 262.7 284 49.6
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 3.9e-68 262.7 284 48.9
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 1.9e-67 260.4 276 48.6
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 7.3e-67 258.5 281 49.1
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 4.8e-66 255.8 299 45.2
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 6.2e-66 255.4 276 48.6
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 6.2e-66 255.4 284 48.2
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 1.1e-65 254.6 277 49.1
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 1.4e-65 254.2 277 49.5
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 1.8e-65 253.8 278 48.2
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 1.8e-65 253.8 278 47.5
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 3.1e-65 253.1 279 48.7
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 3.1e-65 253.1 286 47.2
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 6.9e-65 251.9 329 45.0
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 2.0e-64 250.4 274 50.0
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 2.0e-64 250.4 292 47.3
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 7.6e-64 248.4 274 50.0
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 9.9e-64 248.1 278 47.5
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 9.9e-64 248.1 276 49.6
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.9e-62 243.8 279 45.9
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 3.2e-62 243.0 277 47.3
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 4.2e-62 242.7 279 45.9
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 7.1e-62 241.9 288 45.1
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 1.6e-61 240.7 280 46.8
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 4.6e-61 239.2 253 51.0
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 3.9e-60 236.1 278 47.5
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 1.5e-59 234.2 264 47.7
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 3.3e-59 233.0 280 45.7
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 9.6e-59 231.5 289 45.0
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 1.2e-56 224.6 280 45.0
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 2.1e-45 187.2 196 49.5
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 1.8e-44 184.1 161 52.2
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 2.4e-41 173.7 146 54.8
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 6.9e-41 172.2 220 42.3
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 2.9e-39 166.8 205 47.8
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 3.8e-31 139.8 324 30.6
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 3.8e-31 139.8 149 49.0
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 3.2e-30 136.7 117 57.3
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 7.7e-24 115.5 297 34.3
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 2.3e-20 104.0 79 59.5
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 6.3e-10 69.3 108 39.8
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 3.8e-07 60.1 42 57.1


User provided reference genes

Program Settings