Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 8.1e-144 513.8 281 100.0
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 1.6e-51 207.2 272 49.3
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 1.6e-46 190.7 281 47.7
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.7e-45 187.2 287 44.9
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 6.6e-45 185.3 280 46.1
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 1.5e-44 184.1 280 45.4
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.5e-44 184.1 287 44.9
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 1.9e-44 183.7 279 44.1
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 3.3e-44 183.0 280 45.0
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 3.3e-44 183.0 283 44.2
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 4.7e-43 179.1 251 48.2
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 8.1e-43 178.3 282 45.7
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 8.1e-43 178.3 252 46.8
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 2.3e-42 176.8 280 43.9
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 2.3e-42 176.8 269 46.1
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 8.9e-42 174.9 241 49.0
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 1.5e-41 174.1 270 44.1
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 1.5e-41 174.1 271 46.5
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 7.5e-41 171.8 251 45.0
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 9.9e-41 171.4 263 46.4
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 1.3e-40 171.0 286 43.0
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 1.3e-40 171.0 241 44.8
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 1.7e-40 170.6 242 44.6
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 2.2e-40 170.2 242 47.9
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 4.9e-40 169.1 267 42.3
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 4.9e-40 169.1 281 43.1
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 1.4e-39 167.5 250 46.0
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 1.9e-39 167.2 245 45.7
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 2.4e-39 166.8 248 46.4
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 3.2e-39 166.4 281 42.3
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 4.1e-39 166.0 241 44.0
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 7.1e-39 165.2 241 44.0
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 7.1e-39 165.2 279 43.4
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 9.2e-39 164.9 245 44.9
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.2e-38 164.5 247 42.5
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 1.6e-38 164.1 242 43.8
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 2.1e-38 163.7 243 45.3
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 2.1e-38 163.7 252 44.4
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 2.7e-38 163.3 243 45.7
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 3.5e-38 162.9 284 40.5
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 4.6e-38 162.5 277 42.2
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 6.0e-38 162.2 211 50.2
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 6.0e-38 162.2 248 44.0
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 1.0e-37 161.4 243 44.0
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.0e-37 161.4 238 43.7
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 1.3e-37 161.0 235 45.5
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 1.3e-37 161.0 247 44.1
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 1.3e-37 161.0 284 43.7
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 2.3e-37 160.2 243 46.1
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 3.9e-37 159.5 251 44.2
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 6.6e-37 158.7 219 51.6
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 8.6e-37 158.3 273 40.3
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 1.1e-36 157.9 251 45.0
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 2.5e-36 156.8 249 42.6
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 3.3e-36 156.4 248 42.3
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 4.3e-36 156.0 260 44.2
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 4.3e-36 156.0 238 42.9
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 2.8e-35 153.3 244 43.9
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 4.7e-35 152.5 245 43.7
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 4.7e-35 152.5 250 42.8
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 4.7e-35 152.5 244 43.9
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 1.4e-34 151.0 229 45.0
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 1.8e-34 150.6 241 42.3
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 1.8e-34 150.6 250 42.4
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 2.4e-34 150.2 282 40.8
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 2.4e-34 150.2 273 40.7
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 2.4e-34 150.2 283 40.3
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 5.2e-34 149.1 245 41.6
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 6.8e-34 148.7 242 42.1
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 3.4e-33 146.4 242 41.7
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 4.4e-33 146.0 243 42.4
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 5.8e-33 145.6 234 43.6
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 5.8e-33 145.6 266 41.7
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 7.6e-33 145.2 246 41.1
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 9.9e-33 144.8 239 43.5
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 9.9e-33 144.8 239 43.5
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 1.3e-32 144.4 245 40.4
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 2.2e-32 143.7 327 37.0
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 2.9e-32 143.3 232 42.2
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 2.9e-32 143.3 242 41.3
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 3.8e-32 142.9 234 44.0
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 3.8e-32 142.9 247 43.3
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 4.9e-32 142.5 243 41.6
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 6.4e-32 142.1 208 46.6
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 6.4e-32 142.1 240 41.2
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 8.4e-32 141.7 263 38.4
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 1.1e-31 141.4 232 44.0
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 1.4e-31 141.0 287 37.3
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 1.4e-31 141.0 249 43.0
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 1.9e-31 140.6 249 41.0
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 2.4e-31 140.2 233 42.5
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 3.2e-31 139.8 287 37.6
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 3.2e-31 139.8 287 37.6
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 4.1e-31 139.4 231 42.0
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 4.1e-31 139.4 171 53.2
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 5.4e-31 139.0 208 44.7
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 7.1e-31 138.7 231 42.4
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 1.2e-30 137.9 238 39.1
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 1.2e-30 137.9 238 39.1
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 1.6e-30 137.5 232 41.8
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 2.1e-30 137.1 243 40.3
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 4.6e-30 136.0 242 38.4
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 7.8e-30 135.2 232 40.9
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 7.8e-30 135.2 239 38.9
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 1.0e-29 134.8 260 39.6
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 1.3e-29 134.4 297 36.0
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 1.7e-29 134.0 254 39.0
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 3.0e-29 133.3 231 40.7
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 1.1e-28 131.3 121 59.5
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 1.5e-28 131.0 241 39.4
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 1.5e-28 131.0 285 38.2
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 4.3e-28 129.4 241 41.9
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 4.3e-28 129.4 121 57.9
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 6.9e-26 122.1 130 50.8
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 9.0e-26 121.7 249 35.7
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 4.4e-25 119.4 238 37.4
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 3.8e-24 116.3 127 51.2
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 1.0e-21 108.2 283 33.6
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 3.8e-16 89.7 141 42.6
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 1.9e-15 87.4 181 37.0
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 1.2e-14 84.7 124 42.7
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 6.7e-13 79.0 154 40.3
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 7.6e-09 65.5 173 36.4


User provided reference genes

Program Settings