Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07342 Sequoiadendron giganteum HOM05D008493 ORTHO05D384450 0.0e+00 1434.9 744 100.0
SEGI_33590 Sequoiadendron giganteum HOM05D008493 ORTHO05D386658 6.8e-214 748.0 745 55.6
SEGI_32858 Sequoiadendron giganteum HOM05D008493 ORTHO05D386662 3.9e-121 439.9 766 39.6
SEGI_37707 Sequoiadendron giganteum HOM05D008493 ORTHO05D385948 1.8e-89 334.7 777 33.1
SEGI_22193 Sequoiadendron giganteum HOM05D008493 ORTHO05D386539 7.3e-83 312.8 749 34.0
SEGI_21750 Sequoiadendron giganteum HOM05D008493 ORTHO05D384858 8.3e-79 299.3 240 64.6
SEGI_12437 Sequoiadendron giganteum HOM05D008493 ORTHO05D383911 6.6e-76 289.7 221 68.3
SEGI_23231 Sequoiadendron giganteum HOM05D008493 ORTHO05D385713 2.6e-72 277.7 803 30.1
SEGI_14776 Sequoiadendron giganteum HOM05D008493 ORTHO05D000093 6.4e-71 273.1 778 29.9
SEGI_20128 Sequoiadendron giganteum HOM05D008493 ORTHO05D383890 4.3e-67 260.4 765 29.2
SEGI_35028 Sequoiadendron giganteum HOM05D008493 ORTHO05D384974 1.6e-66 258.5 775 28.9
SEGI_09698 Sequoiadendron giganteum HOM05D008493 ORTHO05D384600 5.1e-60 236.9 763 28.0
SEGI_27098 Sequoiadendron giganteum HOM05D008493 ORTHO05D384421 1.1e-51 209.1 263 45.6
SEGI_19617 Sequoiadendron giganteum HOM05D014181 ORTHO05D386170 1.3e-44 185.7 692 25.9
SEGI_00307 Sequoiadendron giganteum HOM05D008493 ORTHO05D386008 5.1e-44 183.7 161 59.0
SEGI_19166 Sequoiadendron giganteum HOM05D008493 ORTHO05D383966 2.5e-43 181.4 906 22.7
SEGI_29697 Sequoiadendron giganteum HOM05D014181 ORTHO05D385217 1.2e-40 172.6 705 26.5
SEGI_24476 Sequoiadendron giganteum HOM05D008493 ORTHO05D384795 1.4e-38 165.6 702 26.4
SEGI_11176 Sequoiadendron giganteum HOM05D008493 ORTHO05D000004 4.2e-38 164.1 888 24.1
SEGI_15645 Sequoiadendron giganteum HOM05D014181 ORTHO05D384755 2.7e-37 161.4 310 33.2
SEGI_10168 Sequoiadendron giganteum HOM05D008493 ORTHO05D387098 6.6e-36 156.8 686 23.6
SEGI_13831 Sequoiadendron giganteum HOM05D008493 ORTHO05D385998 4.3e-35 154.1 674 24.3
SEGI_00704 Sequoiadendron giganteum HOM05D014181 ORTHO05D387244 5.3e-33 147.1 729 23.0
SEGI_22533 Sequoiadendron giganteum HOM05D014181 ORTHO05D386564 1.2e-32 146.0 722 23.1
SEGI_38659 Sequoiadendron giganteum HOM05D008493 ORTHO05D386684 7.6e-32 143.3 156 48.1
SEGI_23796 Sequoiadendron giganteum HOM05D008493 ORTHO05D000093 1.8e-28 132.1 358 29.1
SEGI_30076 Sequoiadendron giganteum HOM05D008493 ORTHO05D386164 2.5e-27 128.3 366 30.6
SEGI_33286 Sequoiadendron giganteum HOM05D008493 ORTHO05D386822 7.4e-27 126.7 524 27.1
SEGI_36498 Sequoiadendron giganteum HOM05D014181 ORTHO05D384078 2.1e-26 125.2 707 21.2
SEGI_36136 Sequoiadendron giganteum HOM05D014181 ORTHO05D385012 8.1e-26 123.2 571 24.7
SEGI_26476 Sequoiadendron giganteum HOM05D008493 ORTHO05D387272 2.5e-22 111.7 507 24.7
SEGI_15995 Sequoiadendron giganteum HOM05D008493 ORTHO05D386983 2.7e-21 108.2 246 28.9
SEGI_07429 Sequoiadendron giganteum HOM05D008493 ORTHO05D385151 1.6e-18 99.0 174 32.8
SEGI_35849 Sequoiadendron giganteum HOM05D008493 ORTHO05D384391 8.2e-18 96.7 134 41.8
SEGI_15896 Sequoiadendron giganteum HOM05D008493 ORTHO05D385622 9.0e-17 93.2 619 23.9
SEGI_23960 Sequoiadendron giganteum HOM05D008493 ORTHO05D385090 1.0e-15 89.7 303 26.1
SEGI_27455 Sequoiadendron giganteum HOM05D008493 ORTHO05D000093 1.9e-14 85.5 280 28.6
SEGI_35210 Sequoiadendron giganteum HOM05D008493 ORTHO05D384596 1.9e-14 85.5 85 57.6
arahy.Tifrunner.gnm1.ann1.7C4I10 Arachis hypogaea HOM05D001126 ORTHO05D000991 3.2e-14 84.7 735 22.3
SEGI_26910 Sequoiadendron giganteum HOM05D008493 ORTHO05D385928 2.1e-13 82.0 424 26.7
SEGI_13814 Sequoiadendron giganteum HOM05D008493 ORTHO05D387022 3.3e-11 74.7 275 25.5
SEGI_15517 Sequoiadendron giganteum HOM05D008493 ORTHO05D383857 4.3e-11 74.3 231 28.6
arahy.Tifrunner.gnm1.ann1.7SA5TE Arachis hypogaea HOM05D001126 ORTHO05D000991 1.4e-09 69.3 576 23.3
Actinidia35915 Actinidia chinensis HOM05D001126 ORTHO05D000991 2.4e-09 68.6 595 21.3
Ciclev10018984m.g Citrus clementina HOM05D001126 ORTHO05D000991 6.9e-09 67.0 750 20.0
SEGI_19438 Sequoiadendron giganteum HOM05D008493 ORTHO05D385745 6.9e-09 67.0 94 35.1
Lj4g0001641 Lotus japonicus HOM05D001126 ORTHO05D000991 1.5e-08 65.9 769 20.5
SEGI_14644 Sequoiadendron giganteum HOM05D014181 ORTHO05D384077 1.5e-08 65.9 188 27.1
SEGI_23087 Sequoiadendron giganteum HOM05D008493 ORTHO05D000093 1.5e-08 65.9 142 30.3
Migut.O00112 Erythranthe guttata HOM05D001126 ORTHO05D000991 2.0e-08 65.5 509 22.2
Rhsim11G0051500 Rhododendron simsii HOM05D001126 ORTHO05D000991 2.6e-08 65.1 732 19.5
HanXRQChr12g0356091 Helianthus annuus HOM05D001126 ORTHO05D000991 5.9e-08 63.9 344 22.1
Lsat_1_v5_gn_1_43221 Lactuca sativa HOM05D001126 ORTHO05D000991 5.9e-08 63.9 514 21.6
Lsat_1_v5_gn_6_39681 Lactuca sativa HOM05D001126 ORTHO05D000991 1.0e-07 63.2 728 18.7
Medtr4g101050 Medicago truncatula HOM05D001126 ORTHO05D000991 1.7e-07 62.4 765 20.7
ECA246G4059 Erigeron canadensis HOM05D001126 ORTHO05D000991 2.2e-07 62.0 734 19.6
SEGI_22740 Sequoiadendron giganteum HOM05D008493 ORTHO05D000093 2.2e-07 62.0 196 27.6
Sopen08g027230 Solanum pennellii HOM05D001126 ORTHO05D000991 2.2e-07 62.0 767 20.5
CSS0027414 Camellia sinensis var. sinensis HOM05D001126 ORTHO05D000991 3.8e-07 61.2 742 19.7
CsaV3_4G029220 Cucumis sativus L. HOM05D001126 ORTHO05D000991 3.8e-07 61.2 532 20.5
MELO3C019137.2 Cucumis melo HOM05D001126 ORTHO05D000991 5.0e-07 60.8 527 19.9
Lsat_1_v5_gn_6_40021 Lactuca sativa HOM05D001126 ORTHO05D000991 5.0e-07 60.8 739 19.6
Oeu016406.1 Olea europaea HOM05D001126 ORTHO05D000991 6.5e-07 60.5 605 20.3
Sed0007528 Sechium edule HOM05D001126 ORTHO05D000991 6.5e-07 60.5 743 19.9
SEGI_37703 Sequoiadendron giganteum HOM05D008493 ORTHO05D385668 6.5e-07 60.5 94 33.0
HanXRQChr03g0081781 Helianthus annuus HOM05D001126 ORTHO05D000991 8.5e-07 60.1 729 21.0
HanXRQChr17g0540721 Helianthus annuus HOM05D001126 ORTHO05D000991 8.5e-07 60.1 732 19.5
Solyc08g078760.1 Solanum lycopersicum HOM05D001126 ORTHO05D000991 1.1e-06 59.7 766 20.5
TPR.G37645 Trifolium pratense HOM05D001126 ORTHO05D000991 1.4e-06 59.3 743 20.1
arahy.Tifrunner.gnm1.ann1.RQZI72 Arachis hypogaea HOM05D001126 ORTHO05D000991 1.9e-06 58.9 258 28.7
RcHm_v2.0_Chr7g0202971 Rosa chinensis HOM05D001126 ORTHO05D000991 4.2e-06 57.8 520 20.2
SalBow5G0265 Salvia bowleyana HOM05D001126 ORTHO05D000991 4.2e-06 57.8 515 21.2
Lsat_1_v5_gn_6_40720 Lactuca sativa HOM05D001126 ORTHO05D000991 5.5e-06 57.4 767 18.6
Cc08_g12650 Coffea canephora HOM05D001126 ORTHO05D000991 7.2e-06 57.0 725 18.9
Oeu016409.1 Olea europaea HOM05D001126 ORTHO05D000991 7.2e-06 57.0 579 17.8
AL8G10390 Arabidopsis lyrata HOM05D001126 ORTHO05D000991 9.4e-06 56.6 519 21.0
CDE12G0430 Ceratophyllum demersum HOM05D001126 ORTHO05D000991 9.4e-06 56.6 333 19.8


User provided reference genes

Program Settings