Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 5.0e-227 790.8 412 100.0
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 4.5e-167 591.7 324 96.3
SEGI_28238 Sequoiadendron giganteum HOM05D000228 ORTHO05D013010 3.8e-33 146.7 90 84.4
SEGI_11363 Sequoiadendron giganteum HOM05D002015 ORTHO05D384831 2.5e-16 90.9 59 78.0
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 4.2e-16 90.1 125 42.4
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 9.4e-16 89.0 165 38.2
SEGI_03963 Sequoiadendron giganteum HOM05D000239 ORTHO05D000484 1.2e-15 88.6 86 54.7
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.7e-15 87.4 174 39.1
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.7e-15 87.4 177 40.1
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 3.6e-15 87.0 130 42.3
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 4.7e-15 86.7 196 35.7
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 6.1e-15 86.3 235 35.3
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 8.0e-15 85.9 121 41.3
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 3.0e-14 84.0 106 47.2
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 3.0e-14 84.0 76 55.3
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 3.0e-14 84.0 116 39.7
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 4.0e-14 83.6 91 50.5
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 4.0e-14 83.6 185 34.6
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 5.2e-14 83.2 79 53.2
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 5.2e-14 83.2 143 37.8
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 8.8e-14 82.4 167 35.9
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 8.8e-14 82.4 155 36.1
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 8.8e-14 82.4 191 33.5
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 1.2e-13 82.0 214 31.3
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 1.2e-13 82.0 96 46.9
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 1.2e-13 82.0 96 44.8
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 1.2e-13 82.0 131 40.5
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.2e-13 82.0 131 38.9
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 2.0e-13 81.3 96 43.8
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 2.0e-13 81.3 165 33.9
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 2.0e-13 81.3 184 33.2
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 2.6e-13 80.9 124 39.5
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 2.6e-13 80.9 189 34.9
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 2.6e-13 80.9 141 39.7
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 2.6e-13 80.9 96 44.8
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 2.6e-13 80.9 129 38.0
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.4e-13 80.5 159 36.5
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.4e-13 80.5 159 36.5
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 3.4e-13 80.5 116 41.4
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 3.4e-13 80.5 191 33.5
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 3.4e-13 80.5 184 34.8
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 3.4e-13 80.5 122 41.0
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 4.4e-13 80.1 78 51.3
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 4.4e-13 80.1 95 44.2
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 4.4e-13 80.1 147 40.1
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 4.4e-13 80.1 222 32.9
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 5.7e-13 79.7 78 52.6
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.7e-13 79.7 183 36.1
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 5.7e-13 79.7 96 46.9
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 7.5e-13 79.3 116 40.5
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 7.5e-13 79.3 116 40.5
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 7.5e-13 79.3 146 34.2
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 7.5e-13 79.3 97 46.4
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 9.8e-13 79.0 159 35.8
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 1.3e-12 78.6 55 63.6
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 1.3e-12 78.6 176 35.2
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 1.3e-12 78.6 96 44.8
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.7e-12 78.2 96 40.6
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 1.7e-12 78.2 60 58.3
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 1.7e-12 78.2 60 58.3
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 1.7e-12 78.2 60 58.3
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.7e-12 78.2 93 46.2
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 2.2e-12 77.8 148 35.8
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.2e-12 77.8 136 37.5
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 2.2e-12 77.8 89 47.2
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.8e-12 77.4 160 32.5
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 2.8e-12 77.4 63 52.4
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 3.7e-12 77.0 60 56.7
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 3.7e-12 77.0 60 56.7
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 3.7e-12 77.0 129 36.4
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 4.8e-12 76.6 177 32.8
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 6.3e-12 76.3 111 42.3
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 6.3e-12 76.3 172 33.1
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 6.3e-12 76.3 76 52.6
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 8.3e-12 75.9 177 33.9
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 8.3e-12 75.9 58 56.9
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.1e-11 75.5 96 42.7
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 1.1e-11 75.5 148 35.1
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.4e-11 75.1 198 32.3
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.8e-11 74.7 172 37.8
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 1.8e-11 74.7 74 50.0
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 1.8e-11 74.7 136 37.5
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 1.8e-11 74.7 107 43.0
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.8e-11 74.7 117 39.3
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.8e-11 74.7 117 39.3
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 2.4e-11 74.3 198 32.3
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 3.1e-11 73.9 109 38.5
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 3.1e-11 73.9 188 34.6
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 3.1e-11 73.9 287 27.9
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 4.1e-11 73.6 127 37.8
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 5.4e-11 73.2 193 29.5
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 5.4e-11 73.2 198 32.3
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 7.0e-11 72.8 170 31.2
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 7.0e-11 72.8 200 33.0
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 9.1e-11 72.4 205 33.2
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 1.2e-10 72.0 128 38.3
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.2e-10 72.0 198 31.3
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.2e-10 72.0 282 27.0
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 1.6e-10 71.6 188 33.5
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.6e-10 71.6 198 31.8
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 2.0e-10 71.2 243 28.8
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 3.5e-10 70.5 208 30.8
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 4.5e-10 70.1 96 40.6
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 4.5e-10 70.1 158 33.5
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 5.9e-10 69.7 260 28.1
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 1.0e-09 68.9 223 30.5
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 2.2e-09 67.8 157 34.4
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 6.5e-09 66.2 116 37.1
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 8.5e-09 65.9 91 40.7
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.5e-08 65.1 131 35.1


User provided reference genes

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