Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07298 Sequoiadendron giganteum HOM05D001087 ORTHO05D005406 6.8e-96 354.0 179 100.0
ATR0582G201 Amborella trichopoda HOM05D001087 ORTHO05D005406 4.3e-42 175.3 147 65.3
MBI07_g11062_MAGBIO Magnolia biondii HOM05D001087 ORTHO05D005406 4.1e-40 168.7 116 75.0
TAR629G2385 Trochodendron aralioides HOM05D001087 ORTHO05D005406 1.2e-39 167.2 122 72.1
Nn4g22026 Nelumbo nucifera HOM05D001087 ORTHO05D005406 1.5e-39 166.8 122 71.3
CSS0025073 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D005406 2.0e-39 166.4 122 72.1
QL02p063912 Quercus lobata HOM05D001087 ORTHO05D005406 2.0e-39 166.4 151 62.9
TWI32G0903 Tripterygium wilfordii HOM05D001087 ORTHO05D005406 2.6e-39 166.0 125 68.0
MD09G1000300 Malus domestica HOM05D001087 ORTHO05D005406 4.5e-39 165.2 128 67.2
RcHm_v2.0_Chr2g0176781 Rosa chinensis HOM05D001087 ORTHO05D005406 4.5e-39 165.2 122 71.3
FAN27G2264 Fragaria x ananassa HOM05D001087 ORTHO05D005406 1.3e-38 163.7 122 70.5
PSO017G2606 Papaver somniferum HOM05D001087 ORTHO05D005406 1.7e-38 163.3 111 75.7
Prupe.3G316100 Prunus persica HOM05D001087 ORTHO05D005406 1.7e-38 163.3 122 68.9
GSVIVG01032937001 Vitis vinifera HOM05D001087 ORTHO05D005406 2.2e-38 162.9 122 70.5
Hund04150 Selenicereus undatus HOM05D001087 ORTHO05D005406 2.9e-38 162.5 111 74.8
arahy.Tifrunner.gnm1.ann1.65DI7F Arachis hypogaea HOM05D001087 ORTHO05D005406 3.8e-38 162.2 116 73.3
PSO478G2418 Papaver somniferum HOM05D001087 ORTHO05D005406 3.8e-38 162.2 111 74.8
FvH4_6g54490 Fragaria vesca HOM05D001087 ORTHO05D005406 5.0e-38 161.8 122 69.7
FAN14G5433 Fragaria x ananassa HOM05D001087 ORTHO05D005406 5.0e-38 161.8 122 69.7
Thecc.04G053100 Theobroma cacao HOM05D001087 ORTHO05D005406 5.0e-38 161.8 111 73.9
PGR042G1457 Punica granatum HOM05D001087 ORTHO05D005406 6.5e-38 161.4 138 63.0
CiPaw.03G079200 Carya illinoinensis HOM05D001087 ORTHO05D005406 1.4e-37 160.2 122 69.7
AUR62017451 Chenopodium quinoa HOM05D001087 ORTHO05D005406 1.4e-37 160.2 111 73.9
Atru.chr6.2747 Acer truncatum HOM05D001087 ORTHO05D005406 1.9e-37 159.8 122 69.7
AUR62032520 Chenopodium quinoa HOM05D001087 ORTHO05D005406 1.9e-37 159.8 111 74.8
Mapoly0055s0098 Marchantia polymorpha HOM05D001087 ORTHO05D005406 1.9e-37 159.8 112 71.4
Oeu062515.1 Olea europaea HOM05D001087 ORTHO05D005406 2.5e-37 159.5 122 69.7
Manes.04G095500 Manihot esculenta HOM05D001087 ORTHO05D005406 4.2e-37 158.7 122 68.9
Actinidia19533 Actinidia chinensis HOM05D001087 ORTHO05D005406 7.2e-37 157.9 122 68.0
COL.COLO4_13413 Corchorus olitorius HOM05D001087 ORTHO05D005406 7.2e-37 157.9 111 73.0
arahy.Tifrunner.gnm1.ann1.C4QHPC Arachis hypogaea HOM05D001087 ORTHO05D005406 9.4e-37 157.5 111 73.0
Gohir.A08G038200 Gossypium hirsutum HOM05D001087 ORTHO05D005406 9.4e-37 157.5 111 73.9
Ciclev10014134m.g Citrus clementina HOM05D001087 ORTHO05D005406 1.2e-36 157.1 122 68.9
Eucgr.H05015 Eucalyptus grandis HOM05D001087 ORTHO05D005406 2.1e-36 156.4 122 68.9
SalBow4G1044 Salvia bowleyana HOM05D001087 ORTHO05D005406 2.1e-36 156.4 122 68.0
EL10Ac6g13922 Beta vulgaris HOM05D001087 ORTHO05D005406 2.7e-36 156.0 111 72.1
Lalb_Chr14g0364241 Lupinus albus HOM05D001087 ORTHO05D005406 2.7e-36 156.0 111 73.0
Rhsim08G0036900 Rhododendron simsii HOM05D001087 ORTHO05D005406 2.7e-36 156.0 124 66.1
CANSAT64G1951 Cannabis sativa HOM05D001087 ORTHO05D005406 3.6e-36 155.6 122 65.6
CsaV3_3G020140 Cucumis sativus L. HOM05D001087 ORTHO05D005406 4.7e-36 155.2 122 67.2
HPP92_021715 Vanilla planifolia HOM05D001087 ORTHO05D005406 4.7e-36 155.2 121 67.8
Duzib138G0185 Durio zibethinus HOM05D001087 ORTHO05D005406 6.1e-36 154.8 111 70.3
Phvul.001G097600 Phaseolus vulgaris HOM05D001087 ORTHO05D005406 6.1e-36 154.8 147 57.8
Potri.014G141100 Populus trichocarpa HOM05D001087 ORTHO05D005406 7.9e-36 154.5 122 67.2
ClCG05G012380 Citrullus lanatus HOM05D001087 ORTHO05D005406 1.0e-35 154.1 122 67.2
MELO3C014745.2 Cucumis melo HOM05D001087 ORTHO05D005406 1.0e-35 154.1 122 67.2
Gohir.D08G048400 Gossypium hirsutum HOM05D001087 ORTHO05D005406 1.8e-35 153.3 111 72.1
Gorai.004G047900 Gossypium raimondii HOM05D001087 ORTHO05D005406 1.8e-35 153.3 111 72.1
Sed0004915 Sechium edule HOM05D001087 ORTHO05D005406 1.8e-35 153.3 122 67.2
HPP92_021688 Vanilla planifolia HOM05D001087 ORTHO05D005406 1.8e-35 153.3 121 66.9
VMungo1383G1594 Vigna mungo HOM05D001087 ORTHO05D005406 1.8e-35 153.3 147 57.1
CAN.G473.167 Capsicum annuum HOM05D001087 ORTHO05D005406 2.3e-35 152.9 113 69.0
Solyc02g094610.1 Solanum lycopersicum HOM05D001087 ORTHO05D005406 3.0e-35 152.5 122 66.4
Sopen02g039270 Solanum pennellii HOM05D001087 ORTHO05D005406 3.0e-35 152.5 122 66.4
Pp3c14_8290 Physcomitrium patens HOM05D001087 ORTHO05D005406 3.9e-35 152.1 112 67.0
Pp3c14_8293 Physcomitrium patens HOM05D001087 ORTHO05D005406 3.9e-35 152.1 112 67.0
THA.LOC104805290 Tarenaya hassleriana HOM05D001087 ORTHO05D005406 6.7e-35 151.4 128 61.7
Migut.F00007 Erythranthe guttata HOM05D001087 ORTHO05D005406 8.8e-35 151.0 122 63.9
Pp3c10_7760 Physcomitrium patens HOM05D001087 ORTHO05D005406 8.8e-35 151.0 112 68.8
Ah.02g128690 Amaranthus hybridus HOM05D001087 ORTHO05D005406 1.1e-34 150.6 112 68.8
Cc07_g01490 Coffea canephora HOM05D001087 ORTHO05D005406 1.1e-34 150.6 111 67.6
Ca_08243_v3 Cicer arietinum L. HOM05D001087 ORTHO05D005406 1.5e-34 150.2 148 58.1
Aqoxy3G01996 Aquilegia oxysepala HOM05D001087 ORTHO05D005406 9.7e-34 147.5 122 65.6
TPR.G31052 Trifolium pratense HOM05D001087 ORTHO05D005406 2.2e-33 146.4 122 63.9
Lj1g0002000 Lotus japonicus HOM05D001087 ORTHO05D005406 3.7e-33 145.6 111 65.8
Sc16g0004210 Simmondsia chinensis HOM05D001087 ORTHO05D005406 3.7e-33 145.6 111 64.9
MSTRG.3036 Avicennia marina HOM05D001087 ORTHO05D005406 4.8e-33 145.2 122 64.8
BraA09t41703Z Brassica rapa HOM05D001087 ORTHO05D005406 4.8e-33 145.2 112 64.3
Thhalv10006676m.g Eutrema salsugineum HOM05D001087 ORTHO05D005406 6.3e-33 144.8 128 59.4
Glyma.19G107500 Glycine max HOM05D001087 ORTHO05D005406 6.3e-33 144.8 128 58.6
Aa31LG1G1850 Aethionema arabicum HOM05D001087 ORTHO05D005406 1.1e-32 144.1 128 60.2
A09p63520 Brassica napus HOM05D001087 ORTHO05D005406 1.1e-32 144.1 128 58.6
Glyma.16G044400 Glycine max HOM05D001087 ORTHO05D005406 1.1e-32 144.1 122 61.5
Medtr7g084880 Medicago truncatula HOM05D001087 ORTHO05D005406 1.1e-32 144.1 122 62.3
AL1G24570 Arabidopsis lyrata HOM05D001087 ORTHO05D005406 1.4e-32 143.7 128 60.9
AT1G12930 Arabidopsis thaliana HOM05D001087 ORTHO05D005406 1.4e-32 143.7 128 60.9
Psat0s4626g0080 Pisum sativum HOM05D001087 ORTHO05D005406 1.4e-32 143.7 122 61.5
CARHR013280 Cardamine hirsuta HOM05D001087 ORTHO05D005406 1.8e-32 143.3 128 60.2
DCAR_000957 Daucus carota HOM05D001087 ORTHO05D005406 2.4e-32 142.9 111 65.8
Sp1g11500 Schrenkiella parvula HOM05D001087 ORTHO05D005406 2.4e-32 142.9 128 59.4
BcaB08g34240 Brassica carinata HOM05D001087 ORTHO05D005406 3.1e-32 142.5 128 59.4
C08p47020 Brassica napus HOM05D001087 ORTHO05D005406 3.1e-32 142.5 128 59.4
BolC8t52241H Brassica oleracea HOM05D001087 ORTHO05D005406 3.1e-32 142.5 128 59.4
Carub.0001s1270 Capsella rubella HOM05D001087 ORTHO05D005406 3.1e-32 142.5 111 65.8
Cpa.g.sc70.26 Carica papaya HOM05D001087 ORTHO05D005406 3.1e-32 142.5 122 61.5
Lsat_1_v5_gn_3_103380 Lactuca sativa HOM05D001087 ORTHO05D005406 5.3e-32 141.7 122 63.9
Zm00001eb197740 Zea mays HOM05D001087 ORTHO05D005406 3.5e-31 139.0 125 57.6
CDE05G0125 Ceratophyllum demersum HOM05D001087 ORTHO05D005406 2.9e-30 136.0 111 62.2
Nitab4.5_0000519g0400 Nicotiana tabacum HOM05D001087 ORTHO05D005406 2.9e-30 136.0 99 70.7
HanXRQChr17g0550851 Helianthus annuus HOM05D001087 ORTHO05D005406 5.0e-30 135.2 146 52.7
Nitab4.5_0002901g0070 Nicotiana tabacum HOM05D001087 ORTHO05D005406 6.5e-30 134.8 99 70.7
ECA246G3450 Erigeron canadensis HOM05D001087 ORTHO05D005406 1.0e-27 127.5 111 64.9
SGA_v2.0_scaffold44G16961 Striga asiatica HOM05D001087 ORTHO05D005406 1.7e-25 120.2 171 44.4
SMO353G0092 Selaginella moellendorffii HOM05D001087 ORTHO05D005406 3.5e-23 112.5 122 46.7
CBR_g30317 Chara braunii HOM05D001087 ORTHO05D005406 2.9e-22 109.4 120 48.3
A06p08730 Brassica napus HOM05D001087 ORTHO05D005406 2.3e-19 99.8 87 60.9
Sabra14G0106400 Salix brachista HOM05D001087 ORTHO05D005406 2.8e-17 92.8 274 30.3
BolC5t29778H Brassica oleracea HOM05D001087 ORTHO05D005406 1.1e-16 90.9 113 52.2
FAN04G2467 Fragaria x ananassa HOM05D001087 ORTHO05D005406 4.1e-16 89.0 49 85.7
Haze_14336 Corylus avellana HOM05D001087 ORTHO05D005406 5.4e-16 88.6 122 48.4
QL02p063896 Quercus lobata HOM05D001087 ORTHO05D005406 4.5e-15 85.5 86 55.8
C05p10320 Brassica napus HOM05D001087 ORTHO05D005406 1.0e-14 84.3 113 49.6
Dinv00562 Davidia involucrata HOM05D001087 ORTHO05D005406 5.0e-14 82.0 49 81.6
Lj7A620G41 Lonicera japonica HOM05D001087 ORTHO05D005406 1.5e-13 80.5 64 64.1
Peaxi162Scf00420g00945 Petunia axillaris HOM05D001087 ORTHO05D005406 1.5e-13 80.5 48 81.2
Cc00_g11840 Coffea canephora HOM05D001087 ORTHO05D006222 3.2e-13 79.3 71 57.7
Lj7A620G42 Lonicera japonica HOM05D001087 ORTHO05D005406 4.7e-12 75.5 48 75.0
SalBow6G3864 Salvia bowleyana HOM05D001087 ORTHO05D004028 6.8e-11 71.6 74 56.8
SMO144G0109 Selaginella moellendorffii HOM05D004313 ORTHO05D005036 3.8e-06 55.8 118 32.2


User provided reference genes

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