Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07291 Sequoiadendron giganteum HOM05D006764 ORTHO05D008516 7.2e-198 693.7 353 100.0
SEGI_28644 Sequoiadendron giganteum HOM05D006764 ORTHO05D008516 2.6e-107 392.9 200 100.0
GSVIVG01023281001 Vitis vinifera HOM05D006764 ORTHO05D008516 6.5e-82 308.5 336 51.2
ATR0709G017 Amborella trichopoda HOM05D006764 ORTHO05D008516 8.5e-82 308.1 334 50.6
Ciclev10001742m.g Citrus clementina HOM05D006764 ORTHO05D008516 1.1e-81 307.8 333 50.2
CiPaw.05G051400 Carya illinoinensis HOM05D006764 ORTHO05D008516 9.4e-81 304.7 313 53.7
THA.LOC104807147 Tarenaya hassleriana HOM05D006764 ORTHO05D008516 6.1e-80 302.0 330 50.0
Potri.004G222300 Populus trichocarpa HOM05D006764 ORTHO05D008516 1.4e-79 300.8 335 50.7
Thecc.02G025400 Theobroma cacao HOM05D006764 ORTHO05D008516 1.8e-79 300.4 320 51.6
Gohir.D04G175300 Gossypium hirsutum HOM05D006764 ORTHO05D008516 3.0e-79 299.7 320 51.2
TAR628G0031 Trochodendron aralioides HOM05D006764 ORTHO05D008516 3.9e-79 299.3 333 50.2
Gohir.A04G130100 Gossypium hirsutum HOM05D006764 ORTHO05D008516 8.8e-79 298.1 323 50.8
Dinv01845 Davidia involucrata HOM05D006764 ORTHO05D008516 2.0e-78 297.0 330 50.9
Prupe.1G576600 Prunus persica HOM05D006764 ORTHO05D008516 4.4e-78 295.8 324 52.2
Gorai.012G166600 Gossypium raimondii HOM05D006764 ORTHO05D008516 5.7e-78 295.4 317 50.5
PGR042G2798 Punica granatum HOM05D006764 ORTHO05D008516 5.7e-78 295.4 309 51.8
Eucgr.G00355 Eucalyptus grandis HOM05D006764 ORTHO05D008516 1.3e-77 294.3 327 49.5
Actinidia39013 Actinidia chinensis HOM05D006764 ORTHO05D008516 2.2e-77 293.5 320 51.2
MD15G1432200 Malus domestica HOM05D006764 ORTHO05D008516 2.2e-77 293.5 333 50.5
ECA234G3405 Erigeron canadensis HOM05D006764 ORTHO05D008516 1.8e-76 290.4 329 48.0
Manes.07G022500 Manihot esculenta HOM05D006764 ORTHO05D008516 1.8e-76 290.4 319 50.2
Cc02_g22970 Coffea canephora HOM05D006764 ORTHO05D008516 2.4e-76 290.0 317 49.2
Rhsim11G0125600 Rhododendron simsii HOM05D006764 ORTHO05D008516 5.3e-76 288.9 321 51.7
MELO3C011834.2 Cucumis melo HOM05D006764 ORTHO05D008516 6.9e-76 288.5 318 50.9
HanXRQChr10g0294521 Helianthus annuus HOM05D006764 ORTHO05D008516 6.9e-76 288.5 329 47.1
ClCG11G013370 Citrullus lanatus HOM05D006764 ORTHO05D008516 9.1e-76 288.1 320 50.9
CsaV3_5G029880 Cucumis sativus L. HOM05D006764 ORTHO05D008516 1.2e-75 287.7 307 51.1
Lj6g0021331 Lotus japonicus HOM05D006764 ORTHO05D008516 1.2e-75 287.7 312 50.3
Atru.chr6.751 Acer truncatum HOM05D006764 ORTHO05D008516 1.5e-75 287.3 320 50.3
MD08G1240100 Malus domestica HOM05D006764 ORTHO05D008516 3.4e-75 286.2 332 50.3
CANSAT54G1059 Cannabis sativa HOM05D006764 ORTHO05D008516 4.5e-75 285.8 319 49.2
AT4G06676 Arabidopsis thaliana HOM05D006764 ORTHO05D008516 5.9e-75 285.4 315 50.5
PSO170G2545 Papaver somniferum HOM05D006764 ORTHO05D008516 5.9e-75 285.4 327 46.5
CSS0013576 Camellia sinensis var. sinensis HOM05D006764 ORTHO05D008516 7.7e-75 285.0 315 50.8
CARHR260060 Cardamine hirsuta HOM05D006764 ORTHO05D008516 1.3e-74 284.3 314 50.0
Glyma.12G168200 Glycine max HOM05D006764 ORTHO05D008516 3.8e-74 282.7 307 50.2
Psat1g221840 Pisum sativum HOM05D006764 ORTHO05D008516 5.0e-74 282.3 336 45.5
Glyma.16G004200 Glycine max HOM05D006764 ORTHO05D008516 6.5e-74 282.0 325 47.7
AL6G41260 Arabidopsis lyrata HOM05D006764 ORTHO05D008516 8.5e-74 281.6 314 49.4
Carub.0006s2639 Capsella rubella HOM05D006764 ORTHO05D008516 1.1e-73 281.2 330 47.6
Medtr2g006100 Medicago truncatula HOM05D006764 ORTHO05D008516 1.9e-73 280.4 315 49.2
QL02p099872 Quercus lobata HOM05D006764 ORTHO05D008516 1.9e-73 280.4 313 50.5
Phvul.006G217900 Phaseolus vulgaris HOM05D006764 ORTHO05D008516 2.5e-73 280.0 313 48.9
arahy.Tifrunner.gnm1.ann1.0E87YT Arachis hypogaea HOM05D006764 ORTHO05D008516 5.5e-73 278.9 310 49.0
Sc16g0001680 Simmondsia chinensis HOM05D006764 ORTHO05D008516 5.5e-73 278.9 323 48.6
arahy.Tifrunner.gnm1.ann1.FMX4TW Arachis hypogaea HOM05D006764 ORTHO05D008516 7.2e-73 278.5 310 48.7
TPR.G2075 Trifolium pratense HOM05D006764 ORTHO05D008516 7.2e-73 278.5 315 49.5
EL10Ac6g14065 Beta vulgaris HOM05D006764 ORTHO05D008516 9.4e-73 278.1 329 47.1
BcaB01g01263 Brassica carinata HOM05D006764 ORTHO05D008516 9.4e-73 278.1 312 48.1
Solyc10g044910.2 Solanum lycopersicum HOM05D006764 ORTHO05D008516 9.4e-73 278.1 318 48.4
Sopen10g013910 Solanum pennellii HOM05D006764 ORTHO05D008516 1.2e-72 277.7 318 48.1
Aqoxy6G00131 Aquilegia oxysepala HOM05D006764 ORTHO05D008516 2.1e-72 276.9 327 45.6
VMungo0540G1274 Vigna mungo HOM05D006764 ORTHO05D008516 3.6e-72 276.2 319 47.6
FvH4_5g28680 Fragaria vesca HOM05D006764 ORTHO05D008516 4.7e-72 275.8 316 51.3
BraA09t38619Z Brassica rapa HOM05D006764 ORTHO05D008516 1.4e-71 274.2 315 48.6
Nn5g27693 Nelumbo nucifera HOM05D006764 ORTHO05D008516 1.4e-71 274.2 318 48.7
HPP92_009268 Vanilla planifolia HOM05D006764 ORTHO05D008516 1.4e-71 274.2 320 47.8
BcaC04g20869 Brassica carinata HOM05D006764 ORTHO05D008516 1.1e-70 271.2 313 48.6
MBI17_g21477_MAGBIO Magnolia biondii HOM05D006764 ORTHO05D008516 2.6e-70 270.0 304 51.6
Lalb_Chr18g0061021 Lupinus albus HOM05D006764 ORTHO05D008516 3.3e-70 269.6 317 48.6
RcHm_v2.0_Chr7g0220831 Rosa chinensis HOM05D006764 ORTHO05D008516 7.4e-70 268.5 315 49.5
vmacro01728 Vaccinium macrocarpon HOM05D006764 ORTHO05D008516 2.8e-69 266.5 289 51.9
Oeu023412.2 Olea europaea HOM05D006764 ORTHO05D008516 1.1e-68 264.6 270 53.0
Sabra01G0168400 Salix brachista HOM05D006764 ORTHO05D008516 4.1e-68 262.7 334 46.1
TWI59G0639 Tripterygium wilfordii HOM05D006764 ORTHO05D008516 7.0e-68 261.9 349 45.0
SGA_v2.0_scaffold304G47898 Striga asiatica HOM05D006764 ORTHO05D008516 2.6e-67 260.0 277 51.6
A09p30490 Brassica napus HOM05D006764 ORTHO05D008516 4.5e-67 259.2 336 45.2
Pp3c15_15530 Physcomitrium patens HOM05D006764 ORTHO05D008516 1.9e-65 253.8 322 41.3
Thhalv10028801m.g Eutrema salsugineum HOM05D006764 ORTHO05D008516 5.5e-65 252.3 314 45.9
Nitab4.5_0000667g0120 Nicotiana tabacum HOM05D006764 ORTHO05D008516 9.4e-65 251.5 326 46.3
Aa31LG3G14080 Aethionema arabicum HOM05D006764 ORTHO05D008516 1.2e-64 251.1 335 44.2
unitig_748.g8283 Utricularia gibba HOM05D006764 ORTHO05D008516 2.1e-64 250.4 313 45.4
Mapoly0025s0102 Marchantia polymorpha HOM05D006764 ORTHO05D008516 8.8e-63 245.0 320 44.4
Zm00001eb082660 Zea mays HOM05D006764 ORTHO05D008516 2.7e-59 233.4 323 43.0
CAN.G1108.5 Capsicum annuum HOM05D006764 ORTHO05D008516 5.9e-59 232.3 297 45.1
SMO367G0572 Selaginella moellendorffii HOM05D006764 ORTHO05D008516 1.3e-58 231.1 312 43.3
BolC9t56687H Brassica oleracea HOM05D006764 ORTHO05D008516 1.7e-58 230.7 255 49.4
AUR62042713 Chenopodium quinoa HOM05D006764 ORTHO05D008516 2.2e-58 230.3 329 40.7
Migut.B00802 Erythranthe guttata HOM05D006764 ORTHO05D008516 2.2e-58 230.3 330 42.1
C09p38380 Brassica napus HOM05D006764 ORTHO05D008516 4.7e-56 222.6 245 49.4
SHI04828 Sapria himalayana HOM05D006764 ORTHO05D008516 1.0e-55 221.5 279 46.2
Sp6g10710 Schrenkiella parvula HOM05D006764 ORTHO05D008516 6.8e-55 218.8 314 42.4
FAN13G1303 Fragaria x ananassa HOM05D006764 ORTHO05D008516 5.7e-54 215.7 299 46.8
FAN18G3575 Fragaria x ananassa HOM05D006764 ORTHO05D008516 1.3e-53 214.5 273 49.8
COL.COLO4_17757 Corchorus olitorius HOM05D006764 ORTHO05D008516 3.7e-53 213.0 328 43.0
Peaxi162Scf00002g00261 Petunia axillaris HOM05D006764 ORTHO05D008516 8.3e-53 211.8 339 40.4
FAN08G1175 Fragaria x ananassa HOM05D006764 ORTHO05D008516 3.5e-51 206.5 288 47.2
Lsat_1_v5_gn_5_103781 Lactuca sativa HOM05D006764 ORTHO05D008516 1.0e-50 204.9 237 47.7
Duzib132G0537 Durio zibethinus HOM05D006764 ORTHO05D008516 2.5e-49 200.3 300 41.7
PSO017G2259 Papaver somniferum HOM05D006764 ORTHO05D008516 7.2e-49 198.7 219 46.6
Nitab4.5_0008098g0020 Nicotiana tabacum HOM05D006764 ORTHO05D008516 4.1e-44 183.0 318 37.1
Ca_00050_v3 Cicer arietinum L. HOM05D006764 ORTHO05D008516 7.0e-44 182.2 247 42.9
AUR62014213 Chenopodium quinoa HOM05D006764 ORTHO05D008516 7.8e-43 178.7 316 36.7
Haze_01822 Corylus avellana HOM05D006764 ORTHO05D008516 1.7e-42 177.6 368 35.9
SalBow7G3863 Salvia bowleyana HOM05D006764 ORTHO05D008516 1.1e-41 174.9 221 43.9
Cpa.g.sc30.47 Carica papaya HOM05D006764 ORTHO05D008516 7.3e-41 172.2 146 58.2
AagrBONN_evm.TU.Sc2ySwM_228.3284 Anthoceros agrestis HOM05D006764 ORTHO05D008516 6.1e-40 169.1 218 45.4
CBR_g19125 Chara braunii HOM05D006764 ORTHO05D008516 6.0e-35 152.5 199 42.2
DCAR_029270 Daucus carota HOM05D006764 ORTHO05D008516 3.0e-34 150.2 195 46.2
Sed0008550 Sechium edule HOM05D000755 ORTHO05D000642 6.6e-34 149.1 268 38.4
Cre01.g032350 Chlamydomonas reinhardtii HOM05D006764 ORTHO05D008516 5.8e-30 136.0 322 30.7
FAN04G0462 Fragaria x ananassa HOM05D006764 ORTHO05D008516 3.5e-27 126.7 95 68.4
Hund12938 Selenicereus undatus HOM05D006764 ORTHO05D008516 7.8e-27 125.6 150 46.7
Cfa005482 Carpinus fangiana HOM05D006764 ORTHO05D008516 2.8e-24 117.1 133 50.4
Os04g0433200 Oryza sativa ssp. japonica HOM05D006764 ORTHO05D008516 8.1e-24 115.5 120 50.8
MCO04G067 Micromonas commoda HOM05D006764 ORTHO05D008516 7.8e-19 99.0 320 25.0
Hund29476 Selenicereus undatus HOM05D006764 ORTHO05D008516 5.6e-17 92.8 113 45.1
Hund29477 Selenicereus undatus HOM05D006764 ORTHO05D008516 5.6e-17 92.8 113 45.1
Lj5A261T39 Lonicera japonica HOM05D006764 ORTHO05D008516 3.6e-16 90.1 245 35.1
MBI17_g13541_MAGBIO Magnolia biondii HOM05D006764 ORTHO05D008516 2.1e-08 64.3 48 66.7


User provided reference genes

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