Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07219 Sequoiadendron giganteum HOM05D000199 ORTHO05D385697 1.2e-39 166.0 82 100.0
SEGI_04510 Sequoiadendron giganteum HOM05D000199 ORTHO05D001448 8.7e-14 80.1 41 90.2
SEGI_34320 Sequoiadendron giganteum HOM05D000199 ORTHO05D001448 3.1e-11 71.6 41 82.9
SEGI_36039 Sequoiadendron giganteum HOM05D000199 ORTHO05D387251 3.2e-08 61.6 35 85.7
Nn1g01821 Nelumbo nucifera HOM05D000199 ORTHO05D001448 7.1e-08 60.5 37 81.1
TAR629G0714 Trochodendron aralioides HOM05D000199 ORTHO05D001448 7.1e-08 60.5 40 75.0
EL10Ac5g12893 Beta vulgaris HOM05D000199 ORTHO05D001448 1.2e-07 59.7 42 71.4
Hma1.2p1_0952F.1_g240970 Hydrangea macrophylla HOM05D000199 ORTHO05D001448 2.7e-07 58.5 66 51.5
Cc08_g15840 Coffea canephora HOM05D000199 ORTHO05D001448 3.5e-07 58.2 66 48.5
SMO271G0128 Selaginella moellendorffii HOM05D000199 ORTHO05D001448 3.5e-07 58.2 54 55.6
GSVIVG01019506001 Vitis vinifera HOM05D000199 ORTHO05D001448 3.5e-07 58.2 42 69.0
Dinv38853 Davidia involucrata HOM05D000199 ORTHO05D001448 6.1e-07 57.4 42 69.0
MBI07_g24339_MAGBIO Magnolia biondii HOM05D000199 ORTHO05D001448 6.1e-07 57.4 42 69.0
Phvul.002G296800 Phaseolus vulgaris HOM05D000199 ORTHO05D001448 6.1e-07 57.4 42 64.3
Sc01g0010160 Simmondsia chinensis HOM05D000199 ORTHO05D001448 6.1e-07 57.4 37 78.4
PSO384G1640 Papaver somniferum HOM05D000199 ORTHO05D001448 7.9e-07 57.0 37 78.4
Os05g0586500 Oryza sativa ssp. japonica HOM05D000199 ORTHO05D001448 1.0e-06 56.6 40 70.0
VMungo0251G1584 Vigna mungo HOM05D000199 ORTHO05D001448 1.0e-06 56.6 42 66.7
Haze_08654 Corylus avellana HOM05D000199 ORTHO05D001448 1.3e-06 56.2 66 48.5
FvH4_5g04130 Fragaria vesca HOM05D000199 ORTHO05D001448 1.8e-06 55.8 42 64.3
FAN04G0590 Fragaria x ananassa HOM05D000199 ORTHO05D001448 1.8e-06 55.8 42 64.3
FAN04G2419 Fragaria x ananassa HOM05D000199 ORTHO05D001448 1.8e-06 55.8 42 64.3
FAN13G0783 Fragaria x ananassa HOM05D000199 ORTHO05D001448 1.8e-06 55.8 42 64.3
FAN18G2628 Fragaria x ananassa HOM05D000199 ORTHO05D001448 1.8e-06 55.8 42 64.3
FAN18G3499 Fragaria x ananassa HOM05D000199 ORTHO05D001448 1.8e-06 55.8 42 64.3
Eucgr.D01712 Eucalyptus grandis HOM05D000199 ORTHO05D001448 2.3e-06 55.5 42 64.3
Lalb_Chr16g0390591 Lupinus albus HOM05D000199 ORTHO05D001448 2.3e-06 55.5 66 45.5
Pp3c3_11320 Physcomitrium patens HOM05D000199 ORTHO05D001448 2.3e-06 55.5 43 65.1
RcHm_v2.0_Chr7g0195361 Rosa chinensis HOM05D000199 ORTHO05D001448 2.3e-06 55.5 37 70.3
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 3.0e-06 55.1 70 45.7
Eucgr.D01713 Eucalyptus grandis HOM05D000199 ORTHO05D001448 3.0e-06 55.1 42 64.3
SEGI_07174 Sequoiadendron giganteum HOM05D000199 ORTHO05D001448 3.0e-06 55.1 37 70.3
SEGI_36790 Sequoiadendron giganteum HOM05D000199 ORTHO05D001448 3.0e-06 55.1 36 72.2
CiPaw.11G123300 Carya illinoinensis HOM05D000199 ORTHO05D001448 3.9e-06 54.7 37 73.0
MELO3C016305.2 Cucumis melo HOM05D000199 ORTHO05D001448 3.9e-06 54.7 66 47.0
Lj2C170G14 Lonicera japonica HOM05D000199 ORTHO05D001448 5.1e-06 54.3 34 76.5
QL02p031307 Quercus lobata HOM05D000199 ORTHO05D001448 5.1e-06 54.3 66 47.0
CsaV3_4G006450 Cucumis sativus L. HOM05D000199 ORTHO05D001448 6.7e-06 53.9 66 48.5
Lj4g0010173 Lotus japonicus HOM05D000199 ORTHO05D001448 6.7e-06 53.9 66 47.0
Lj4g0015638 Lotus japonicus HOM05D000199 ORTHO05D001448 6.7e-06 53.9 66 47.0
SGA_v2.0_scaffold111G31424 Striga asiatica HOM05D000199 ORTHO05D001448 6.7e-06 53.9 40 67.5
vmacro11442 Vaccinium macrocarpon HOM05D000199 ORTHO05D001448 6.7e-06 53.9 42 66.7
Aqoxy7G00144 Aquilegia oxysepala HOM05D000199 ORTHO05D001448 8.7e-06 53.5 55 56.4
Glyma.05G215600 Glycine max HOM05D000199 ORTHO05D001448 8.7e-06 53.5 42 64.3


User provided reference genes

Program Settings