Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 7.4e-267 923.3 471 100.0
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 5.6e-214 747.7 378 100.0
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 2.6e-134 483.0 470 56.0
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.1e-129 467.6 319 69.3
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.5e-121 439.9 470 51.9
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.8e-119 433.7 442 52.7
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.8e-116 423.7 436 52.8
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.7e-114 417.2 472 49.4
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 3.6e-112 409.5 439 51.0
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.9e-109 399.8 428 50.0
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 8.3e-93 345.1 312 53.8
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 1.7e-90 337.4 308 52.9
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 2.3e-90 337.0 310 52.9
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 2.3e-90 337.0 312 52.2
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 5.1e-90 335.9 312 52.2
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 8.6e-90 335.1 312 51.9
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 1.5e-89 334.3 315 52.4
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 1.5e-89 334.3 336 49.4
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 1.9e-89 334.0 310 51.9
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.9e-89 334.0 310 51.9
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 1.9e-89 334.0 313 51.4
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 4.3e-89 332.8 312 51.6
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 7.3e-89 332.0 312 51.3
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 1.6e-88 330.9 311 51.1
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.6e-88 330.9 310 51.9
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 2.1e-88 330.5 312 51.3
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 4.7e-88 329.3 312 51.0
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 3.1e-87 326.6 310 51.3
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 4.0e-87 326.2 315 50.8
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 1.2e-86 324.7 320 49.7
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 2.6e-86 323.6 308 51.9
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 5.8e-86 322.4 312 51.6
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 5.8e-86 322.4 312 51.0
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 9.9e-86 321.6 308 49.7
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 9.9e-86 321.6 312 50.3
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 9.9e-86 321.6 213 74.6
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.7e-85 320.9 312 50.6
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 2.9e-85 320.1 312 51.0
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 2.9e-85 320.1 312 49.4
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 3.8e-85 319.7 327 49.2
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 3.8e-85 319.7 312 50.6
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 4.9e-85 319.3 313 48.9
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 4.9e-85 319.3 336 47.3
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 8.4e-85 318.5 308 49.0
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.1e-84 318.2 313 48.9
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 1.4e-84 317.8 310 49.4
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 1.9e-84 317.4 312 49.7
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 2.4e-84 317.0 311 51.4
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 2.4e-84 317.0 313 48.9
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 2.4e-84 317.0 312 49.7
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 2.4e-84 317.0 348 46.8
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 3.2e-84 316.6 315 50.8
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 4.2e-84 316.2 313 48.9
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 5.4e-84 315.8 313 48.9
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 5.4e-84 315.8 312 49.4
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 5.4e-84 315.8 320 47.8
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 9.2e-84 315.1 308 48.7
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.2e-83 314.7 312 49.7
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 1.6e-83 314.3 339 47.8
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 2.1e-83 313.9 320 48.4
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 4.6e-83 312.8 314 49.0
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 4.6e-83 312.8 314 49.0
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 6.0e-83 312.4 314 49.0
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 6.0e-83 312.4 349 47.0
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.0e-82 311.6 316 49.7
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 1.7e-82 310.8 310 49.0
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.3e-82 310.5 319 50.5
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 3.9e-82 309.7 316 49.4
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 5.1e-82 309.3 314 48.1
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 1.9e-81 307.4 318 48.7
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 4.3e-81 306.2 322 48.4
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 1.3e-80 304.7 318 48.7
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 1.6e-80 304.3 312 48.1
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 2.1e-80 303.9 320 48.1
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 8.1e-80 302.0 318 48.1
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 1.1e-79 301.6 293 50.2
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 1.4e-79 301.2 320 46.9
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.8e-79 300.8 287 51.2
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 6.9e-79 298.9 308 48.7
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 6.9e-79 298.9 307 47.2
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 9.0e-79 298.5 293 49.8
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 3.4e-78 296.6 317 48.6
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 7.6e-78 295.4 315 47.3
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 2.9e-77 293.5 318 46.2
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 4.9e-77 292.7 318 46.2
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 8.4e-77 292.0 312 47.1
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 1.4e-76 291.2 309 47.9
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 4.2e-76 289.7 339 43.7
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 5.4e-76 289.3 308 46.1
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.3e-74 284.6 282 49.3
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 1.3e-74 284.6 269 52.0
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 6.6e-74 282.3 345 43.5
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 6.6e-74 282.3 275 52.7
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 1.3e-72 278.1 320 45.0
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 3.6e-72 276.6 312 44.9
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 6.4e-69 265.8 258 51.9
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 1.4e-68 264.6 323 43.3
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 1.2e-67 261.5 286 45.8
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 2.0e-62 244.2 252 48.0
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 5.8e-62 242.7 336 40.5
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 4.9e-61 239.6 238 48.3
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 1.9e-60 237.7 321 42.1
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 6.7e-58 229.2 237 49.4
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 7.6e-54 215.7 224 48.2
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 6.5e-53 212.6 311 39.2
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 3.2e-52 210.3 319 37.0
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 6.3e-40 169.5 310 32.9
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 6.9e-39 166.0 308 33.1
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 5.0e-21 106.7 103 48.5
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 8.8e-18 95.9 117 46.2
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 7.2e-12 76.3 113 35.4


User provided reference genes

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