Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07192 Sequoiadendron giganteum HOM05D000668 ORTHO05D000516 7.6e-93 344.0 192 100.0
SEGI_33666 Sequoiadendron giganteum HOM05D000668 ORTHO05D000516 2.3e-25 119.8 121 57.0
ATR0796G076 Amborella trichopoda HOM05D000668 ORTHO05D000516 2.0e-08 63.5 61 54.1
Ah.04g161110 Amaranthus hybridus HOM05D000668 ORTHO05D000516 2.6e-08 63.2 73 50.7
A10p01560 Brassica napus HOM05D000668 ORTHO05D000516 7.5e-08 61.6 64 50.0
BraA10t42431Z Brassica rapa HOM05D000668 ORTHO05D000516 7.5e-08 61.6 64 50.0
AT1G02900 Arabidopsis thaliana HOM05D000668 ORTHO05D000516 1.7e-07 60.5 60 55.0
BcaB03g15752 Brassica carinata HOM05D000668 ORTHO05D000516 1.7e-07 60.5 64 50.0
BcaB03g15753 Brassica carinata HOM05D000668 ORTHO05D000516 1.7e-07 60.5 64 50.0
Carub.0001s0203 Capsella rubella HOM05D000668 ORTHO05D000516 1.7e-07 60.5 100 40.0
Ciclev10023750m.g Citrus clementina HOM05D000668 ORTHO05D000516 1.7e-07 60.5 95 43.2
Dinv40341 Davidia involucrata HOM05D000668 ORTHO05D000516 1.7e-07 60.5 85 40.0
AL1G12340 Arabidopsis lyrata HOM05D000668 ORTHO05D000516 2.2e-07 60.1 58 55.2
A08p37540 Brassica napus HOM05D000668 ORTHO05D000516 3.7e-07 59.3 60 53.3
CiPaw.07G106300 Carya illinoinensis HOM05D000668 ORTHO05D000516 3.7e-07 59.3 100 40.0
Thhalv10009124m.g Eutrema salsugineum HOM05D000668 ORTHO05D000516 4.9e-07 58.9 60 53.3
Sp1g01900 Schrenkiella parvula HOM05D000668 ORTHO05D000516 4.9e-07 58.9 60 53.3
BolC5t28935H Brassica oleracea HOM05D000668 ORTHO05D000516 6.4e-07 58.5 109 38.5
Gohir.D11G120300 Gossypium hirsutum HOM05D000668 ORTHO05D000516 6.4e-07 58.5 63 47.6
Gorai.007G129000 Gossypium raimondii HOM05D000668 ORTHO05D000516 6.4e-07 58.5 63 47.6
Hma1.2p1_1212F.1_g267290 Hydrangea macrophylla HOM05D000668 ORTHO05D000516 6.4e-07 58.5 62 50.0
Potri.014G131800 Populus trichocarpa HOM05D000668 ORTHO05D000516 6.4e-07 58.5 107 38.3
TAR362G0455 Trochodendron aralioides HOM05D000668 ORTHO05D000516 6.4e-07 58.5 63 47.6
TAR633G1015 Trochodendron aralioides HOM05D000668 ORTHO05D000516 6.4e-07 58.5 63 49.2
BraA08t35651Z Brassica rapa HOM05D000668 ORTHO05D000516 8.3e-07 58.2 64 48.4
MELO3C004224.2 Cucumis melo HOM05D000668 ORTHO05D000516 8.3e-07 58.2 84 41.7
Actinidia24836 Actinidia chinensis HOM05D000668 ORTHO05D000516 1.1e-06 57.8 83 44.6
Actinidia24837 Actinidia chinensis HOM05D004153 ORTHO05D004678 1.1e-06 57.8 60 55.0
BcaC05g24574 Brassica carinata HOM05D000668 ORTHO05D000516 1.1e-06 57.8 109 38.5
C05p01560 Brassica napus HOM05D000668 ORTHO05D000516 1.1e-06 57.8 109 38.5
ClCG00G001980 Citrullus lanatus HOM05D000668 ORTHO05D000516 1.1e-06 57.8 84 41.7
ClCG02G015440 Citrullus lanatus HOM05D000668 ORTHO05D000516 1.1e-06 57.8 84 41.7
EL10Ac4g09919 Beta vulgaris HOM05D000668 ORTHO05D000516 1.4e-06 57.4 108 40.7
Duzib133G0092 Durio zibethinus HOM05D000668 ORTHO05D000516 1.4e-06 57.4 68 45.6
MBI18_g21828_MAGBIO Magnolia biondii HOM05D000668 ORTHO05D000516 1.4e-06 57.4 61 49.2
MBI19_g29224_MAGBIO Magnolia biondii HOM05D000668 ORTHO05D000516 1.4e-06 57.4 94 39.4
Sabra14G0098000 Salix brachista HOM05D000668 ORTHO05D000516 1.4e-06 57.4 61 45.9
CANSAT25G0871 Cannabis sativa HOM05D000668 ORTHO05D000516 1.9e-06 57.0 107 39.3
Carub.0033s0004 Capsella rubella HOM05D000668 ORTHO05D000516 1.9e-06 57.0 97 39.2
AUR62000768 Chenopodium quinoa HOM05D000668 ORTHO05D000516 1.9e-06 57.0 73 47.9
Duzib138G0285 Durio zibethinus HOM05D000668 ORTHO05D000516 1.9e-06 57.0 63 47.6
Atru.chr5.1183 Acer truncatum HOM05D000668 ORTHO05D000516 2.4e-06 56.6 99 38.4
Aqoxy2G02986 Aquilegia oxysepala HOM05D000668 ORTHO05D000516 2.4e-06 56.6 91 42.9
FvH4_2g25351 Fragaria vesca HOM05D000668 ORTHO05D000516 2.4e-06 56.6 61 47.5
FAN24G3138 Fragaria x ananassa HOM05D000668 ORTHO05D000516 2.4e-06 56.6 61 47.5
FAN27G0851 Fragaria x ananassa HOM05D000668 ORTHO05D000516 2.4e-06 56.6 61 47.5
Gohir.A11G115300 Gossypium hirsutum HOM05D000668 ORTHO05D000516 2.4e-06 56.6 63 46.0
Psat3g022600 Pisum sativum HOM05D000668 ORTHO05D000516 2.4e-06 56.6 109 34.9
RcHm_v2.0_Chr6g0293531 Rosa chinensis HOM05D000668 ORTHO05D000516 2.4e-06 56.6 61 47.5
TAR365G0715 Trochodendron aralioides HOM05D000668 ORTHO05D000516 2.4e-06 56.6 100 37.0
MSTRG.27981 Avicennia marina HOM05D000668 ORTHO05D000516 3.2e-06 56.2 101 38.6
BcaC07g36985 Brassica carinata HOM05D000668 ORTHO05D000516 3.2e-06 56.2 64 46.9
BcaC07g36987 Brassica carinata HOM05D000668 ORTHO05D000516 3.2e-06 56.2 64 46.9
C08p00320 Brassica napus HOM05D000668 ORTHO05D000516 3.2e-06 56.2 64 46.9
BolC8t46833H Brassica oleracea HOM05D000668 ORTHO05D000516 3.2e-06 56.2 64 46.9
Cfa005951 Carpinus fangiana HOM05D000668 ORTHO05D000516 3.2e-06 56.2 71 49.3
CsaV3_2G006630 Cucumis sativus L. HOM05D000668 ORTHO05D000516 3.2e-06 56.2 102 37.3
MD03G1284900 Malus domestica HOM05D000668 ORTHO05D000516 3.2e-06 56.2 77 42.9
Prupe.6G321200 Prunus persica HOM05D000668 ORTHO05D000516 3.2e-06 56.2 97 39.2
Prupe.8G258000 Prunus persica HOM05D000668 ORTHO05D000516 3.2e-06 56.2 67 47.8
Sc16g0008620 Simmondsia chinensis HOM05D000668 ORTHO05D000516 3.2e-06 56.2 58 51.7
TWI12G0335 Tripterygium wilfordii HOM05D000668 ORTHO05D000516 3.2e-06 56.2 88 40.9
CARHR002250 Cardamine hirsuta HOM05D000668 ORTHO05D000516 4.1e-06 55.8 97 38.1
Hma1.2p1_0209F.1_g088620 Hydrangea macrophylla HOM05D000668 ORTHO05D000516 4.1e-06 55.8 64 50.0
Thecc.01G297000 Theobroma cacao HOM05D000668 ORTHO05D000516 4.1e-06 55.8 100 40.0
TPR.G9615 Trifolium pratense HOM05D000668 ORTHO05D000516 4.1e-06 55.8 98 39.8
COL.COLO4_10515 Corchorus olitorius HOM05D000668 ORTHO05D000516 5.4e-06 55.5 94 38.3
Migut.N02079 Erythranthe guttata HOM05D000668 ORTHO05D000516 5.4e-06 55.5 63 47.6
Migut.O00419 Erythranthe guttata HOM05D000668 ORTHO05D000516 5.4e-06 55.5 63 47.6
FAN20G0886 Fragaria x ananassa HOM05D000668 ORTHO05D000516 7.0e-06 55.1 61 47.5
Glyma.10G152000 Glycine max HOM05D000668 ORTHO05D000516 7.0e-06 55.1 57 50.9
Peaxi162Scf00067g00252 Petunia axillaris HOM05D000668 ORTHO05D000516 7.0e-06 55.1 62 46.8
Phvul.007G197000 Phaseolus vulgaris HOM05D000668 ORTHO05D000516 7.0e-06 55.1 59 50.8
PGSC0003DMG400011369 Solanum tuberosum HOM05D000668 ORTHO05D000516 7.0e-06 55.1 84 41.7
Aa31LG1G9660 Aethionema arabicum HOM05D000668 ORTHO05D000516 9.2e-06 54.7 62 50.0
arahy.Tifrunner.gnm1.ann1.K757UK Arachis hypogaea HOM05D000668 ORTHO05D000516 9.2e-06 54.7 108 38.9
CSS0034518 Camellia sinensis var. sinensis HOM05D000668 ORTHO05D000516 9.2e-06 54.7 72 43.1
Cc01_g20640 Coffea canephora HOM05D000668 ORTHO05D000516 9.2e-06 54.7 68 48.5
DCAR_018328 Daucus carota HOM05D000668 ORTHO05D000516 9.2e-06 54.7 109 41.3
Dinv30805 Davidia involucrata HOM05D000668 ORTHO05D000516 9.2e-06 54.7 61 44.3


User provided reference genes

Program Settings