Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07173 Sequoiadendron giganteum HOM05D011601 ORTHO05D021003 0.0e+00 1222.2 604 100.0
SEGI_38854 Sequoiadendron giganteum HOM05D011601 ORTHO05D003630 9.4e-73 278.9 151 90.7
SEGI_05251 Sequoiadendron giganteum HOM05D011601 ORTHO05D021003 3.4e-70 270.4 190 73.7
SEGI_37721 Sequoiadendron giganteum HOM05D011601 ORTHO05D021003 3.4e-70 270.4 190 73.7
SEGI_06465 Sequoiadendron giganteum HOM05D011601 ORTHO05D021003 6.4e-21 106.7 77 66.2
SEGI_34165 Sequoiadendron giganteum HOM05D000188 ORTHO05D000362 5.1e-18 97.1 84 61.9
SEGI_04742 Sequoiadendron giganteum HOM05D000188 ORTHO05D000362 3.6e-16 90.9 107 47.7
SEGI_39081 Sequoiadendron giganteum HOM05D000188 ORTHO05D000362 1.1e-15 89.4 98 49.0
SEGI_22534 Sequoiadendron giganteum HOM05D001448 ORTHO05D005781 6.9e-15 86.7 61 67.2
SEGI_39382 Sequoiadendron giganteum HOM05D000188 ORTHO05D000362 1.2e-14 85.9 107 46.7
SEGI_40752 Sequoiadendron giganteum HOM05D000188 ORTHO05D000362 1.2e-14 85.9 86 50.0
Nn1g02698 Nelumbo nucifera HOM05D001448 ORTHO05D005781 8.7e-10 69.7 61 54.1
SEGI_19758 Sequoiadendron giganteum HOM05D011601 ORTHO05D385187 1.9e-09 68.6 51 64.7
Peaxi162Scf00134g00123 Petunia axillaris HOM05D001448 ORTHO05D005781 1.6e-08 65.5 52 53.8
CSS0017569 Camellia sinensis var. sinensis HOM05D001448 ORTHO05D005781 2.8e-08 64.7 51 58.8
CSS0028913 Camellia sinensis var. sinensis HOM05D001448 ORTHO05D005781 2.8e-08 64.7 51 58.8
QL09p037774 Quercus lobata HOM05D001448 ORTHO05D005781 2.8e-08 64.7 49 61.2
CiPaw.04G184800 Carya illinoinensis HOM05D001448 ORTHO05D005781 6.2e-08 63.5 49 59.2
Nitab4.5_0004192g0040 Nicotiana tabacum HOM05D001448 ORTHO05D005781 6.2e-08 63.5 94 40.4
Pp3c8_17220 Physcomitrium patens HOM05D001448 ORTHO05D005781 1.1e-07 62.8 64 46.9
Ah.02g111820 Amaranthus hybridus HOM05D001448 ORTHO05D005781 1.4e-07 62.4 51 52.9
CAN.G461.11 Capsicum annuum HOM05D001448 ORTHO05D005781 1.4e-07 62.4 94 39.4
Solyc03g117970.4 Solanum lycopersicum HOM05D001448 ORTHO05D005781 1.4e-07 62.4 61 45.9
Duzib211G0273 Durio zibethinus HOM05D001448 ORTHO05D005781 1.8e-07 62.0 40 62.5
MD10G1187800 Malus domestica HOM05D001448 ORTHO05D005781 2.4e-07 61.6 82 42.7
PSO017G5465 Papaver somniferum HOM05D001448 ORTHO05D005781 3.1e-07 61.2 85 42.4
PSO063G1607 Papaver somniferum HOM05D001448 ORTHO05D005781 3.1e-07 61.2 85 42.4
Rhsim01G0266300 Rhododendron simsii HOM05D001448 ORTHO05D005781 4.0e-07 60.8 82 45.1
Actinidia09565 Actinidia chinensis HOM05D001448 ORTHO05D005781 5.3e-07 60.5 89 41.6
AUR62011902 Chenopodium quinoa HOM05D001448 ORTHO05D005781 5.3e-07 60.5 90 41.1
DCAR_018467 Daucus carota HOM05D001448 ORTHO05D005781 5.3e-07 60.5 94 40.4
MD05G1201000 Malus domestica HOM05D001448 ORTHO05D005781 5.3e-07 60.5 82 42.7
Nitab4.5_0000086g0180 Nicotiana tabacum HOM05D001448 ORTHO05D005781 5.3e-07 60.5 94 39.4
Potri.002G041300 Populus trichocarpa HOM05D001448 ORTHO05D005781 5.3e-07 60.5 61 49.2
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 5.3e-07 60.5 94 39.4
Dinv22438 Davidia involucrata HOM05D001448 ORTHO05D005781 9.0e-07 59.7 84 44.0
FvH4_2g21980 Fragaria vesca HOM05D001448 ORTHO05D005781 9.0e-07 59.7 40 57.5
Sopen03g036870 Solanum pennellii HOM05D001448 ORTHO05D005781 9.0e-07 59.7 94 38.3
Cfa002395 Carpinus fangiana HOM05D001448 ORTHO05D005781 1.5e-06 58.9 82 43.9
AUR62024743 Chenopodium quinoa HOM05D001448 ORTHO05D005781 1.5e-06 58.9 90 40.0
Haze_24590 Corylus avellana HOM05D001448 ORTHO05D005781 1.5e-06 58.9 82 43.9
Haze_24594 Corylus avellana HOM05D001448 ORTHO05D005781 1.5e-06 58.9 82 43.9
Os07g0413700 Oryza sativa ssp. japonica HOM05D001448 ORTHO05D005781 1.5e-06 58.9 93 38.7
RcHm_v2.0_Chr6g0288861 Rosa chinensis HOM05D001448 ORTHO05D005781 1.5e-06 58.9 82 42.7
Sc24g0002470 Simmondsia chinensis HOM05D001448 ORTHO05D005781 1.5e-06 58.9 61 45.9
vmacro14854 Vaccinium macrocarpon HOM05D001448 ORTHO05D005781 1.5e-06 58.9 97 40.2
Gohir.A04G021951 Gossypium hirsutum HOM05D001448 ORTHO05D005781 2.0e-06 58.5 38 60.5
Lj1g0021166 Lotus japonicus HOM05D001448 ORTHO05D005781 2.0e-06 58.5 61 44.3
THA.LOC104800882 Tarenaya hassleriana HOM05D001448 ORTHO05D005781 2.0e-06 58.5 71 39.4
ATR0680G401 Amborella trichopoda HOM05D001448 ORTHO05D005781 2.6e-06 58.2 42 54.8
Aqoxy5G00274 Aquilegia oxysepala HOM05D001448 ORTHO05D005781 2.6e-06 58.2 94 40.4
ClCG07G000910 Citrullus lanatus HOM05D001448 ORTHO05D005781 2.6e-06 58.2 84 41.7
CBR_g1120 Chara braunii HOM05D001448 ORTHO05D005781 4.5e-06 57.4 49 57.1
Sabra02G0032900 Salix brachista HOM05D001448 ORTHO05D005781 4.5e-06 57.4 94 40.4
EL10Ac5g10426 Beta vulgaris HOM05D001448 ORTHO05D005781 5.8e-06 57.0 84 40.5
FAN27G1373 Fragaria x ananassa HOM05D001448 ORTHO05D005781 5.8e-06 57.0 82 41.5
Sed0017037 Sechium edule HOM05D001448 ORTHO05D005781 5.8e-06 57.0 159 28.9
Aa31LG5G5640 Aethionema arabicum HOM05D001448 ORTHO05D005781 9.9e-06 56.2 43 51.2


User provided reference genes

Program Settings