Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07058 Sequoiadendron giganteum HOM05D006922 ORTHO05D008564 3.3e-138 495.0 237 100.0
Aqoxy4G02590 Aquilegia oxysepala HOM05D006922 ORTHO05D008564 2.2e-57 226.5 141 66.7
TAR636G2664 Trochodendron aralioides HOM05D006922 ORTHO05D008564 2.2e-57 226.5 138 69.6
Ciclev10028135m.g Citrus clementina HOM05D006922 ORTHO05D008564 1.1e-56 224.2 145 64.8
GSVIVG01024745001 Vitis vinifera HOM05D006922 ORTHO05D008564 2.4e-56 223.0 141 66.7
RcHm_v2.0_Chr5g0069361 Rosa chinensis HOM05D006922 ORTHO05D008564 7.0e-56 221.5 141 66.7
FvH4_3g38500 Fragaria vesca HOM05D006922 ORTHO05D008564 9.1e-56 221.1 141 66.7
Atru.chr3.4225 Acer truncatum HOM05D006922 ORTHO05D008564 1.2e-55 220.7 141 66.7
Lalb_Chr17g0345061 Lupinus albus HOM05D006922 ORTHO05D008564 1.2e-55 220.7 141 66.7
Nn2g13696 Nelumbo nucifera HOM05D006922 ORTHO05D008564 1.2e-55 220.7 141 66.0
QL01p038111 Quercus lobata HOM05D006922 ORTHO05D008564 1.2e-55 220.7 144 63.9
Dinv14441 Davidia involucrata HOM05D006922 ORTHO05D008564 1.6e-55 220.3 141 65.2
Gohir.D13G229600 Gossypium hirsutum HOM05D006922 ORTHO05D008564 1.6e-55 220.3 141 67.4
Gohir.A13G224600 Gossypium hirsutum HOM05D006922 ORTHO05D008564 2.7e-55 219.5 141 66.0
ATR0618G165 Amborella trichopoda HOM05D006922 ORTHO05D008564 3.5e-55 219.2 141 69.5
Gorai.013G260300 Gossypium raimondii HOM05D006922 ORTHO05D008564 3.5e-55 219.2 141 66.7
PSO339G4985 Papaver somniferum HOM05D006922 ORTHO05D008564 3.5e-55 219.2 145 61.4
TWI75G0327 Tripterygium wilfordii HOM05D006922 ORTHO05D008564 3.5e-55 219.2 141 63.8
CiPaw.13G078100 Carya illinoinensis HOM05D006922 ORTHO05D008564 4.5e-55 218.8 144 64.6
MELO3C025853.2 Cucumis melo HOM05D006922 ORTHO05D008564 4.5e-55 218.8 145 64.8
ClCG02G019570 Citrullus lanatus HOM05D006922 ORTHO05D008564 5.9e-55 218.4 145 64.8
Hund18850 Selenicereus undatus HOM05D006922 ORTHO05D008564 5.9e-55 218.4 145 63.4
CsaV3_6G016240 Cucumis sativus L. HOM05D006922 ORTHO05D008564 7.7e-55 218.0 145 64.8
PSO384G3055 Papaver somniferum HOM05D006922 ORTHO05D008564 7.7e-55 218.0 145 61.4
Duzib170G0653 Durio zibethinus HOM05D006922 ORTHO05D008564 1.0e-54 217.6 141 66.0
Rhsim13G0069900 Rhododendron simsii HOM05D006922 ORTHO05D008564 1.3e-54 217.2 142 62.7
Actinidia25162 Actinidia chinensis HOM05D006922 ORTHO05D008564 1.7e-54 216.9 142 64.8
Manes.02G119900 Manihot esculenta HOM05D006922 ORTHO05D008564 2.3e-54 216.5 141 64.5
Solyc09g031610.4 Solanum lycopersicum HOM05D006922 ORTHO05D008564 2.3e-54 216.5 141 63.8
Peaxi162Scf00116g00214 Petunia axillaris HOM05D006922 ORTHO05D008564 2.9e-54 216.1 141 65.2
CSS0043924 Camellia sinensis var. sinensis HOM05D006922 ORTHO05D008564 5.0e-54 215.3 141 63.8
Sopen09g014130 Solanum pennellii HOM05D006922 ORTHO05D008564 5.0e-54 215.3 141 63.8
Thecc.09G302300 Theobroma cacao HOM05D006922 ORTHO05D008564 5.0e-54 215.3 141 65.2
vmacro02966 Vaccinium macrocarpon HOM05D006922 ORTHO05D008564 5.0e-54 215.3 145 60.7
Sabra16G0152600 Salix brachista HOM05D006922 ORTHO05D008564 6.6e-54 214.9 144 65.3
Eucgr.B02258 Eucalyptus grandis HOM05D006922 ORTHO05D008564 1.1e-53 214.2 142 64.1
Lsat_1_v5_gn_5_171361 Lactuca sativa HOM05D006922 ORTHO05D008564 1.1e-53 214.2 141 63.8
Prupe.6G058000 Prunus persica HOM05D006922 ORTHO05D008564 1.1e-53 214.2 141 66.0
Potri.001G251000 Populus trichocarpa HOM05D006922 ORTHO05D008564 1.9e-53 213.4 144 63.9
LjContig00155g0013001 Lotus japonicus HOM05D006922 ORTHO05D008564 2.5e-53 213.0 141 63.1
EL10Ac7g16162 Beta vulgaris HOM05D006922 ORTHO05D008564 3.3e-53 212.6 145 62.8
MD11G1075200 Malus domestica HOM05D006922 ORTHO05D008564 3.3e-53 212.6 141 65.2
TPR.G5774 Trifolium pratense HOM05D006922 ORTHO05D008564 3.3e-53 212.6 141 64.5
Nitab4.5_0006472g0010 Nicotiana tabacum HOM05D006922 ORTHO05D008564 4.2e-53 212.2 143 64.3
Phvul.008G261700 Phaseolus vulgaris HOM05D006922 ORTHO05D008564 4.2e-53 212.2 141 64.5
Cpa.g.sc112.28 Carica papaya HOM05D006922 ORTHO05D008564 7.2e-53 211.5 141 61.0
Glyma.14G193200 Glycine max HOM05D006922 ORTHO05D008564 7.2e-53 211.5 141 64.5
Medtr5g070310 Medicago truncatula HOM05D006922 ORTHO05D008564 7.2e-53 211.5 141 66.0
PGR102G2313 Punica granatum HOM05D006922 ORTHO05D008564 1.6e-52 210.3 141 63.1
CDE04G0365 Ceratophyllum demersum HOM05D006922 ORTHO05D008564 2.1e-52 209.9 142 64.1
Migut.N00796 Erythranthe guttata HOM05D006922 ORTHO05D008564 2.1e-52 209.9 141 61.7
HPP92_019886 Vanilla planifolia HOM05D006922 ORTHO05D008564 2.8e-52 209.5 148 65.5
Cc01_g14160 Coffea canephora HOM05D006922 ORTHO05D008564 4.7e-52 208.8 145 60.0
Glyma.02G226300 Glycine max HOM05D006922 ORTHO05D008564 4.7e-52 208.8 141 62.4
HanXRQChr01g0011191 Helianthus annuus HOM05D006922 ORTHO05D008564 4.7e-52 208.8 141 61.7
Oeu056142.1 Olea europaea HOM05D006922 ORTHO05D008564 4.7e-52 208.8 145 59.3
AagrBONN_evm.TU.Sc2ySwM_344.796 Anthoceros agrestis HOM05D006922 ORTHO05D008564 6.1e-52 208.4 148 60.8
Psat2g058840 Pisum sativum HOM05D006922 ORTHO05D008564 6.1e-52 208.4 141 64.5
VMungo0647G1020 Vigna mungo HOM05D006922 ORTHO05D008564 8.0e-52 208.0 141 63.1
CANSAT54G2041 Cannabis sativa HOM05D006922 ORTHO05D008564 1.4e-51 207.2 145 60.0
FAN25G0993 Fragaria x ananassa HOM05D006922 ORTHO05D008564 1.4e-51 207.2 162 57.4
ECA248G0600 Erigeron canadensis HOM05D006922 ORTHO05D008564 1.8e-51 206.8 141 61.7
VMungo1080G0717 Vigna mungo HOM05D006922 ORTHO05D008564 1.8e-51 206.8 141 63.8
Sc12g0000700 Simmondsia chinensis HOM05D006922 ORTHO05D008564 2.3e-51 206.5 141 62.4
Os01g0141700 Oryza sativa ssp. japonica HOM05D006922 ORTHO05D008564 3.0e-51 206.1 145 60.0
arahy.Tifrunner.gnm1.ann1.GN6H4S Arachis hypogaea HOM05D006922 ORTHO05D008564 4.0e-51 205.7 141 63.1
arahy.Tifrunner.gnm1.ann1.TP1S59 Arachis hypogaea HOM05D006922 ORTHO05D008564 4.0e-51 205.7 141 63.1
MSTRG.17876 Avicennia marina HOM05D006922 ORTHO05D008564 6.8e-51 204.9 156 55.1
Zm00001eb335650 Zea mays HOM05D006922 ORTHO05D008564 1.2e-50 204.1 145 60.0
THA.LOC104814912 Tarenaya hassleriana HOM05D006922 ORTHO05D008564 1.5e-50 203.8 151 57.0
Sed0026257 Sechium edule HOM05D006922 ORTHO05D008564 2.0e-50 203.4 145 61.4
SGA_v2.0_scaffold146G36139 Striga asiatica HOM05D006922 ORTHO05D008564 2.0e-50 203.4 141 59.6
DCAR_007371 Daucus carota HOM05D006922 ORTHO05D008564 2.6e-50 203.0 145 60.0
Ah.08g221140 Amaranthus hybridus HOM05D006922 ORTHO05D008564 3.4e-50 202.6 143 61.5
SHI19141 Sapria himalayana HOM05D006922 ORTHO05D008564 9.8e-50 201.1 145 58.6
Cfa011691 Carpinus fangiana HOM05D006922 ORTHO05D008564 2.2e-49 199.9 147 60.5
Carub.0008s1938 Capsella rubella HOM05D006922 ORTHO05D008564 1.1e-48 197.6 141 61.0
Nitab4.5_0021689g0010 Nicotiana tabacum HOM05D006922 ORTHO05D008564 1.8e-48 196.8 166 53.6
Haze_24310 Corylus avellana HOM05D006922 ORTHO05D008564 9.2e-48 194.5 197 47.2
Haze_24317 Corylus avellana HOM05D006922 ORTHO05D008564 9.2e-48 194.5 197 47.2
SMO200G0225 Selaginella moellendorffii HOM05D006922 ORTHO05D008564 3.5e-47 192.6 148 57.4
FAN21G2294 Fragaria x ananassa HOM05D006922 ORTHO05D008564 1.1e-45 187.6 162 53.7
CBR_g22343 Chara braunii HOM05D006922 ORTHO05D008564 9.5e-45 184.5 153 52.3
Lj2A1081T41 Lonicera japonica HOM05D006922 ORTHO05D008564 1.5e-42 177.2 155 51.0
Sp6g20450 Schrenkiella parvula HOM05D006922 ORTHO05D008564 4.1e-40 169.1 141 53.9
AL8G35040 Arabidopsis lyrata HOM05D006922 ORTHO05D008564 9.2e-40 167.9 141 54.6
BcaB05g22449 Brassica carinata HOM05D006922 ORTHO05D008564 9.2e-40 167.9 141 53.2
A02p07550 Brassica napus HOM05D006922 ORTHO05D008564 1.6e-39 167.2 141 53.9
BraA02t05832Z Brassica rapa HOM05D006922 ORTHO05D008564 1.6e-39 167.2 141 53.9
Thhalv10013126m.g Eutrema salsugineum HOM05D006922 ORTHO05D008564 1.6e-39 167.2 141 53.2
BcaC03g14075 Brassica carinata HOM05D006922 ORTHO05D008564 2.7e-39 166.4 141 53.2
C02p13110 Brassica napus HOM05D006922 ORTHO05D008564 2.7e-39 166.4 141 53.2
BolC2t07428H Brassica oleracea HOM05D006922 ORTHO05D008564 2.7e-39 166.4 141 53.2
AT5G58760 Arabidopsis thaliana HOM05D006922 ORTHO05D008564 7.8e-39 164.9 141 53.9
CARHR272670 Cardamine hirsuta HOM05D006922 ORTHO05D008564 7.8e-39 164.9 141 53.9
Aa31LG11G520 Aethionema arabicum HOM05D006922 ORTHO05D008564 1.0e-38 164.5 141 53.9
Hma1.2p1_0227F.1_g096470 Hydrangea macrophylla HOM05D006922 ORTHO05D008564 3.9e-38 162.5 110 62.7
FAN11G1737 Fragaria x ananassa HOM05D006922 ORTHO05D008564 9.5e-37 157.9 104 60.6
FAN21G0821 Fragaria x ananassa HOM05D006922 ORTHO05D008564 8.0e-36 154.8 104 59.6
Ca_05595_v3 Cicer arietinum L. HOM05D006922 ORTHO05D008564 1.5e-34 150.6 100 60.0
AUR62001652 Chenopodium quinoa HOM05D006922 ORTHO05D008564 5.8e-34 148.7 100 59.0
HPP92_019877 Vanilla planifolia HOM05D006922 ORTHO05D008564 7.5e-34 148.3 148 52.7
Pp3c8_16660 Physcomitrium patens HOM05D006922 ORTHO05D008564 9.8e-34 147.9 148 45.3
AUR62020125 Chenopodium quinoa HOM05D006922 ORTHO05D008564 1.3e-33 147.5 104 55.8
COL.COLO4_19151 Corchorus olitorius HOM05D006922 ORTHO05D008564 5.4e-24 115.5 72 65.3
SEGI_35587 Sequoiadendron giganteum HOM05D000267 ORTHO05D023280 1.1e-21 107.8 74 71.6
Actinidia25165 Actinidia chinensis HOM05D006922 ORTHO05D008564 2.1e-20 103.6 81 51.9
unitig_0.g440 Utricularia gibba HOM05D006922 ORTHO05D008564 1.0e-14 84.7 98 41.8
Actinidia14207 Actinidia chinensis HOM05D000103 ORTHO05D008564 5.4e-08 62.4 41 65.9
Actinidia16090 Actinidia chinensis HOM05D006922 ORTHO05D008564 5.4e-08 62.4 42 69.0


User provided reference genes

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