Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 0.0e+00 2509.6 1387 100.0
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 0.0e+00 2281.9 1279 100.0
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 1.3e-109 402.5 1304 33.8
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 6.4e-109 400.2 1258 33.9
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 9.0e-103 379.8 1257 33.9
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 2.2e-93 348.6 1312 32.5
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 1.5e-86 325.9 1261 32.0
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 7.9e-83 313.5 1261 32.6
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.8e-82 312.4 1268 32.2
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.8e-82 312.4 1255 31.6
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 6.7e-82 310.5 1243 31.9
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 7.4e-81 307.0 1263 31.4
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 1.4e-79 302.8 1257 31.2
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 4.1e-79 301.2 1327 31.7
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 1.2e-78 299.7 1262 31.5
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 2.0e-78 298.9 1258 32.4
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 4.5e-78 297.7 1256 31.9
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 4.5e-78 297.7 1247 31.5
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 1.7e-77 295.8 1253 32.7
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 3.0e-74 285.0 1268 31.9
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 6.7e-74 283.9 1256 31.4
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 1.1e-73 283.1 1261 30.5
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 1.5e-73 282.7 1252 31.3
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 9.7e-73 280.0 1331 30.7
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 2.8e-72 278.5 1237 31.0
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 2.8e-72 278.5 1313 31.2
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 4.8e-72 277.7 1256 30.3
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 4.8e-72 277.7 1320 30.7
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.8e-71 275.8 1333 29.9
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 1.8e-71 275.8 1278 30.7
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 2.4e-71 275.4 1260 31.3
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 3.1e-71 275.0 1329 31.0
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 4.1e-71 274.6 1258 30.4
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 5.3e-71 274.2 1336 31.1
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 7.0e-71 273.9 1265 31.8
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 7.0e-71 273.9 1315 31.0
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 7.0e-71 273.9 1304 27.3
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 9.1e-71 273.5 1271 29.7
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 1.6e-70 272.7 1315 30.4
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 4.5e-70 271.2 1268 30.8
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 1.7e-69 269.2 1265 29.8
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 1.5e-68 266.2 1263 31.4
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 1.9e-68 265.8 1326 30.8
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 4.2e-68 264.6 1271 30.8
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 5.5e-68 264.2 1326 30.4
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 2.7e-67 261.9 1250 30.0
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 4.7e-67 261.2 1316 30.1
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 5.2e-66 257.7 1266 30.1
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 1.1e-65 256.5 1313 29.8
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 1.1e-65 256.5 1268 30.7
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 1.5e-65 256.1 1249 29.9
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 4.4e-65 254.6 1267 30.3
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 7.5e-65 253.8 1178 31.8
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 7.5e-65 253.8 1295 30.2
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 9.7e-65 253.4 1268 29.1
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 2.2e-64 252.3 1252 31.2
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 3.7e-64 251.5 1327 28.9
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 6.3e-64 250.8 1308 30.7
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 8.2e-64 250.4 514 38.3
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 1.1e-63 250.0 1245 31.2
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 2.4e-63 248.8 1261 28.8
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 2.4e-63 248.8 1237 30.0
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 3.1e-63 248.4 1314 29.4
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 4.5e-62 244.6 1226 30.5
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 3.8e-61 241.5 744 37.2
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 3.8e-61 241.5 1310 29.0
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 6.5e-61 240.7 1293 25.7
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 6.5e-61 240.7 1302 28.6
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 1.1e-60 240.0 1252 26.0
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 5.5e-60 237.7 1257 30.4
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 1.0e-58 233.4 1231 29.6
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 2.6e-57 228.8 1225 28.7
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 9.8e-57 226.9 1235 29.1
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 3.1e-55 221.9 459 40.1
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 4.1e-55 221.5 1237 29.6
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 5.4e-55 221.1 361 39.9
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 9.1e-55 220.3 1325 28.5
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 1.6e-54 219.5 1263 28.8
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 3.5e-54 218.4 497 36.2
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 7.7e-54 217.2 1250 29.0
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 1.3e-53 216.5 1311 29.9
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 2.9e-53 215.3 1227 29.4
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 6.5e-53 214.2 1230 31.3
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 6.5e-53 214.2 418 38.8
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 1.1e-52 213.4 424 36.3
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 1.9e-52 212.6 1238 26.0
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 1.0e-50 206.8 1249 29.9
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 4.0e-50 204.9 1243 29.0
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 4.0e-50 204.9 1233 26.8
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 4.0e-50 204.9 1173 28.8
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 1.5e-49 203.0 1251 28.4
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 9.8e-49 200.3 1312 27.7
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.7e-48 199.5 1478 27.1
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 7.0e-47 194.1 1204 29.7
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 7.0e-47 194.1 1204 29.7
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 7.0e-47 194.1 1204 29.7
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 2.0e-46 192.6 1223 29.2
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 3.5e-46 191.8 1223 28.7
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 1.3e-45 189.9 1285 30.0
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 5.0e-45 188.0 373 39.1
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 1.9e-44 186.0 476 33.6
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 6.1e-43 181.0 205 49.3
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 2.3e-42 179.1 925 29.9
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 4.1e-39 168.3 157 54.1
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 9.2e-39 167.2 404 35.1
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 3.0e-37 162.2 129 61.2
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 6.6e-37 161.0 389 34.7
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 2.5e-36 159.1 762 28.2
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 6.4e-32 144.4 1140 28.7
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 9.2e-31 140.6 285 37.2
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 3.1e-26 125.6 125 53.6
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 3.4e-25 122.1 125 52.8
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 2.9e-24 119.0 1324 23.4
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 4.1e-23 115.2 1069 27.6
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 7.8e-22 110.9 477 27.9
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 1.7e-21 109.8 330 29.7
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 8.6e-21 107.5 691 24.3
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 1.1e-18 100.5 1156 23.6
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 4.0e-18 98.6 563 25.9
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 6.8e-18 97.8 1049 26.9
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 4.4e-17 95.1 66 63.6
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 1.4e-15 90.1 1227 24.4
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 1.3e-13 83.6 52 69.2
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 7.3e-12 77.8 147 38.1
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 2.8e-11 75.9 601 22.8
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 6.2e-11 74.7 156 34.0
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 4.0e-10 72.0 1245 24.7
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 5.8e-09 68.2 1046 27.1
Actinidia32135 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.9e-08 65.9 62 53.2
SHI11163 Sapria himalayana HOM05D004845 ORTHO05D005957 8.4e-08 64.3 53 60.4
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 1.4e-07 63.5 690 23.2
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 9.3e-07 60.8 79 48.1
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 4.6e-06 58.5 56 51.8


User provided reference genes

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