Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07019 Sequoiadendron giganteum HOM05D008163 ORTHO05D010305 2.3e-93 345.5 173 100.0
FAN03G0237 Fragaria x ananassa HOM05D008163 ORTHO05D010305 4.1e-21 105.5 102 54.9
RcHm_v2.0_Chr1g0321141 Rosa chinensis HOM05D008163 ORTHO05D010305 4.1e-21 105.5 102 54.9
MD15G1374400 Malus domestica HOM05D008163 ORTHO05D010305 5.3e-21 105.1 153 43.1
Hma1.2p1_0136F.1_g062003 Hydrangea macrophylla HOM05D008163 ORTHO05D010305 7.0e-21 104.8 116 50.0
Os12g0517200 Oryza sativa ssp. japonica HOM05D008163 ORTHO05D010305 9.1e-21 104.4 107 54.2
FvH4_7g02510 Fragaria vesca HOM05D008163 ORTHO05D010305 1.2e-20 104.0 100 55.0
FAN06G4466 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.2e-20 104.0 100 55.0
MD12G1044600 Malus domestica HOM05D008163 ORTHO05D010305 1.2e-20 104.0 104 52.9
Prupe.7G030100 Prunus persica HOM05D008163 ORTHO05D010305 1.2e-20 104.0 100 53.0
Zm00001eb056700 Zea mays HOM05D008163 ORTHO05D010305 1.2e-20 104.0 106 50.9
Zm00001eb215210 Zea mays HOM05D008163 ORTHO05D010305 2.0e-20 103.2 106 52.8
Prupe.4G282300 Prunus persica HOM05D008163 ORTHO05D010305 4.5e-20 102.1 100 52.0
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 1.0e-19 100.9 115 43.5
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 1.7e-19 100.1 131 41.2
RcHm_v2.0_Chr2g0149911 Rosa chinensis HOM05D008163 ORTHO05D010305 1.7e-19 100.1 101 54.5
Sabra07G0061500 Salix brachista HOM05D008163 ORTHO05D010305 5.0e-19 98.6 114 47.4
Actinidia29350 Actinidia chinensis HOM05D008163 ORTHO05D010305 8.5e-19 97.8 90 54.4
Sabra15G0022500 Salix brachista HOM05D008163 ORTHO05D010305 8.5e-19 97.8 114 46.5
Hund21444 Selenicereus undatus HOM05D008163 ORTHO05D010305 1.1e-18 97.4 100 54.0
AL3G36570 Arabidopsis lyrata HOM05D008163 ORTHO05D010305 1.5e-18 97.1 116 49.1
CARHR098200 Cardamine hirsuta HOM05D008163 ORTHO05D010305 1.9e-18 96.7 119 48.7
AT3G22300 Arabidopsis thaliana HOM05D008163 ORTHO05D010305 2.5e-18 96.3 116 49.1
Potri.007G072900 Populus trichocarpa HOM05D008163 ORTHO05D010305 2.5e-18 96.3 74 62.2
Carub.0003s2247 Capsella rubella HOM05D008163 ORTHO05D010305 4.2e-18 95.5 116 49.1
SalBow1G5351 Salvia bowleyana HOM05D008163 ORTHO05D010305 4.2e-18 95.5 100 53.0
SalBow1G7817 Salvia bowleyana HOM05D008163 ORTHO05D010305 4.2e-18 95.5 100 53.0
BcaB06g26334 Brassica carinata HOM05D008163 ORTHO05D010305 9.4e-18 94.4 121 45.5
SHI03043 Sapria himalayana HOM05D008163 ORTHO05D010305 9.4e-18 94.4 96 51.0
A05p26470 Brassica napus HOM05D008163 ORTHO05D010305 1.6e-17 93.6 123 45.5
BraA05t21520Z Brassica rapa HOM05D008163 ORTHO05D010305 1.6e-17 93.6 123 45.5
Thhalv10021368m.g Eutrema salsugineum HOM05D008163 ORTHO05D010305 1.6e-17 93.6 132 43.2
BcaC01g03452 Brassica carinata HOM05D008163 ORTHO05D010305 2.1e-17 93.2 136 39.7
C03p52430 Brassica napus HOM05D008163 ORTHO05D010305 2.1e-17 93.2 136 39.7
BolC3t17513H Brassica oleracea HOM05D008163 ORTHO05D010305 2.1e-17 93.2 136 39.7
A03p42710 Brassica napus HOM05D008163 ORTHO05D010305 2.7e-17 92.8 130 41.5
Manes.09G036100 Manihot esculenta HOM05D008163 ORTHO05D010305 3.6e-17 92.4 77 58.4
BraA03t13418Z Brassica rapa HOM05D008163 ORTHO05D010305 4.7e-17 92.0 128 42.2
Rhsim06G0223600 Rhododendron simsii HOM05D000504 ORTHO05D000403 8.0e-17 91.3 77 57.1
Pp3c3_3090 Physcomitrium patens HOM05D008163 ORTHO05D010305 1.4e-16 90.5 101 45.5
BcaC05g28083 Brassica carinata HOM05D008163 ORTHO05D010305 1.8e-16 90.1 108 47.2
C05p41060 Brassica napus HOM05D008163 ORTHO05D010305 1.8e-16 90.1 108 47.2
BolC5t32848H Brassica oleracea HOM05D008163 ORTHO05D010305 1.8e-16 90.1 108 47.2
Solyc11g063600.3 Solanum lycopersicum HOM05D008163 ORTHO05D010305 1.8e-16 90.1 114 44.7
Sp3g20090 Schrenkiella parvula HOM05D008163 ORTHO05D010305 2.3e-16 89.7 81 56.8
Aa31LG8G8870 Aethionema arabicum HOM05D008163 ORTHO05D010305 4.0e-16 89.0 117 45.3
EL10Ac8g20156 Beta vulgaris HOM05D008163 ORTHO05D010305 1.2e-15 87.4 87 51.7
Prupe.7G029400 Prunus persica HOM05D008163 ORTHO05D010305 1.2e-15 87.4 74 58.1
AUR62021886 Chenopodium quinoa HOM05D008163 ORTHO05D010305 2.0e-15 86.7 96 51.0
AUR62012772 Chenopodium quinoa HOM05D008163 ORTHO05D010305 2.6e-15 86.3 96 50.0
Ah.14g087810 Amaranthus hybridus HOM05D000967 ORTHO05D000796 3.4e-15 85.9 106 46.2
PSO017G7110 Papaver somniferum HOM05D008163 ORTHO05D010305 4.4e-15 85.5 76 55.3
PSO170G4613 Papaver somniferum HOM05D008163 ORTHO05D010305 4.4e-15 85.5 76 55.3
CSS0047821 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 1.7e-14 83.6 73 58.9
CSS0033547 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 2.2e-14 83.2 73 58.9
DCAR_027582 Daucus carota HOM05D008163 ORTHO05D010305 2.8e-14 82.8 100 44.0
AUR62036216 Chenopodium quinoa HOM05D008163 ORTHO05D010305 4.8e-14 82.0 96 49.0
Lalb_Chr00c21g0405831 Lupinus albus HOM05D008163 ORTHO05D010305 8.3e-14 81.3 96 46.9
Nn1g09991 Nelumbo nucifera HOM05D008163 ORTHO05D010305 1.1e-13 80.9 93 50.5
Nn1g10091 Nelumbo nucifera HOM05D008163 ORTHO05D010305 1.1e-13 80.9 93 50.5
AagrBONN_evm.TU.Sc2ySwM_368.972 Anthoceros agrestis HOM05D008163 ORTHO05D010305 1.4e-13 80.5 119 37.0
TPR.G20554 Trifolium pratense HOM05D008163 ORTHO05D010305 3.1e-13 79.3 99 45.5
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.7e-11 73.6 98 42.9
Nitab4.5_0001127g0310 Nicotiana tabacum HOM05D008163 ORTHO05D010305 4.2e-10 68.9 99 41.4
Nitab4.5_0000592g0150 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.6e-09 67.0 125 34.4
Nitab4.5_0000172g1360 Nicotiana tabacum HOM05D008163 ORTHO05D010305 4.7e-09 65.5 88 44.3
Glyma.17G185500 Glycine max HOM05D008163 ORTHO05D010305 8.0e-09 64.7 71 50.7
FAN10G0940 Fragaria x ananassa HOM05D008163 ORTHO05D010305 2.2e-06 56.6 51 54.9
SMO196G0141 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 2.8e-06 56.2 70 38.6
SMO234G0032 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 2.8e-06 56.2 70 38.6
MCO07G521 Micromonas commoda HOM05D004814 ORTHO05D005778 3.7e-06 55.8 91 37.4
Nitab4.5_0001702g0010 Nicotiana tabacum HOM05D011509 ORTHO05D010305 6.3e-06 55.1 67 46.3


User provided reference genes

Program Settings