Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 5.3e-153 544.7 347 100.0
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 4.1e-113 412.1 218 100.0
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 9.1e-20 102.1 123 43.9
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 1.0e-18 98.6 143 38.5
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.2e-18 97.4 144 41.0
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 3.8e-18 96.7 123 42.3
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 5.0e-18 96.3 126 42.1
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 5.0e-18 96.3 142 38.7
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 6.5e-18 95.9 123 39.8
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 8.5e-18 95.5 125 40.0
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 8.5e-18 95.5 124 41.1
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 2.5e-17 94.0 214 34.1
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 3.2e-17 93.6 142 38.0
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 5.5e-17 92.8 124 41.1
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 9.4e-17 92.0 141 39.7
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.2e-16 91.7 125 41.6
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 1.2e-16 91.7 125 41.6
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 1.2e-16 91.7 123 40.7
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 2.1e-16 90.9 124 40.3
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 2.1e-16 90.9 218 32.1
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 2.1e-16 90.9 123 38.2
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 3.6e-16 90.1 123 39.0
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 3.6e-16 90.1 128 38.3
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 3.6e-16 90.1 140 36.4
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 6.1e-16 89.4 141 39.0
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 6.1e-16 89.4 141 39.0
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 6.1e-16 89.4 124 39.5
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 7.9e-16 89.0 129 38.8
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 7.9e-16 89.0 120 38.3
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 7.9e-16 89.0 120 38.3
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 7.9e-16 89.0 124 40.3
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.0e-15 88.6 128 36.7
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 1.4e-15 88.2 127 37.8
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 1.4e-15 88.2 127 37.8
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 1.4e-15 88.2 127 37.8
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 1.4e-15 88.2 155 35.5
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 1.8e-15 87.8 123 38.2
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 3.0e-15 87.0 124 38.7
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 3.0e-15 87.0 121 40.5
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 3.0e-15 87.0 128 36.7
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 3.9e-15 86.7 123 38.2
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 3.9e-15 86.7 128 36.7
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 5.1e-15 86.3 139 38.1
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 5.1e-15 86.3 139 37.4
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 5.1e-15 86.3 181 34.8
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 5.1e-15 86.3 129 42.6
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 6.7e-15 85.9 123 36.6
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 6.7e-15 85.9 124 37.1
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 6.7e-15 85.9 125 36.8
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 8.8e-15 85.5 135 37.0
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 8.8e-15 85.5 124 37.9
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 8.8e-15 85.5 124 37.1
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 1.1e-14 85.1 124 37.9
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 1.1e-14 85.1 123 38.2
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 1.5e-14 84.7 192 33.3
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 1.5e-14 84.7 124 37.9
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 2.0e-14 84.3 142 35.9
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.0e-14 84.3 123 36.6
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 2.6e-14 84.0 123 38.2
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 2.6e-14 84.0 123 38.2
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 2.6e-14 84.0 124 36.3
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 4.4e-14 83.2 124 37.1
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 4.4e-14 83.2 122 37.7
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 4.4e-14 83.2 136 34.6
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 4.4e-14 83.2 122 37.7
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 5.7e-14 82.8 190 30.0
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 5.7e-14 82.8 123 36.6
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 5.7e-14 82.8 123 36.6
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 5.7e-14 82.8 122 36.9
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 5.7e-14 82.8 122 37.7
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 5.7e-14 82.8 126 38.9
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 7.4e-14 82.4 123 36.6
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 7.4e-14 82.4 124 36.3
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 7.4e-14 82.4 226 31.0
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 9.7e-14 82.0 122 37.7
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 1.3e-13 81.6 143 35.7
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 1.3e-13 81.6 121 38.8
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 1.3e-13 81.6 198 32.3
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 1.7e-13 81.3 123 38.2
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 1.7e-13 81.3 124 36.3
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 1.7e-13 81.3 136 34.6
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 2.2e-13 80.9 122 37.7
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 2.2e-13 80.9 199 31.7
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 2.2e-13 80.9 124 33.9
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 2.2e-13 80.9 122 36.9
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 2.2e-13 80.9 125 38.4
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 2.8e-13 80.5 124 37.1
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.8e-13 80.5 123 35.8
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 2.8e-13 80.5 199 31.7
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 2.8e-13 80.5 125 38.4
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 3.7e-13 80.1 206 30.6
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 6.3e-13 79.3 124 37.9
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 6.3e-13 79.3 122 36.1
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 8.2e-13 79.0 132 34.8
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 1.4e-12 78.2 185 30.8
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 2.4e-12 77.4 133 34.6
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 3.1e-12 77.0 187 31.0
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 3.1e-12 77.0 124 36.3
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 9.1e-12 75.5 153 33.3
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 9.1e-12 75.5 165 34.5
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 1.2e-11 75.1 124 33.9
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 2.0e-11 74.3 122 37.7
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 1.0e-10 72.0 126 38.1
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 1.3e-10 71.6 132 34.1
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 3.2e-09 67.0 138 36.2
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 5.2e-07 59.7 81 38.3


User provided reference genes

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