Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06891 Sequoiadendron giganteum HOM05D002486 ORTHO05D002606 1.7e-42 175.6 90 100.0
SEGI_01199 Sequoiadendron giganteum HOM05D002486 ORTHO05D002606 3.4e-27 124.8 81 79.0
SEGI_12704 Sequoiadendron giganteum HOM05D002486 ORTHO05D002606 8.1e-13 77.0 81 51.9
TPR.G9137 Trifolium pratense HOM05D002486 ORTHO05D002606 4.9e-10 67.8 76 47.4
C09p58820 Brassica napus HOM05D002486 ORTHO05D002606 6.4e-10 67.4 81 44.4
QL07p019482 Quercus lobata HOM05D002486 ORTHO05D002606 6.4e-10 67.4 81 46.9
CiPaw.10G001000 Carya illinoinensis HOM05D002486 ORTHO05D002606 1.9e-09 65.9 79 45.6
Sp6g26160 Schrenkiella parvula HOM05D002486 ORTHO05D002606 1.9e-09 65.9 80 47.5
Nn2g15866 Nelumbo nucifera HOM05D002486 ORTHO05D002606 3.2e-09 65.1 93 40.9
Actinidia17304 Actinidia chinensis HOM05D002486 ORTHO05D002606 5.4e-09 64.3 81 44.4
A03p08680 Brassica napus HOM05D002486 ORTHO05D002606 5.4e-09 64.3 76 43.4
Phvul.004G080100 Phaseolus vulgaris HOM05D002486 ORTHO05D002606 5.4e-09 64.3 76 47.4
AL6G29350 Arabidopsis lyrata HOM05D002486 ORTHO05D002606 7.1e-09 63.9 80 43.8
AT5G18150 Arabidopsis thaliana HOM05D002486 ORTHO05D002606 7.1e-09 63.9 80 45.0
Solyc06g075190.1 Solanum lycopersicum HOM05D002486 ORTHO05D002606 1.2e-08 63.2 86 43.0
Sopen06g031600 Solanum pennellii HOM05D002486 ORTHO05D002606 1.2e-08 63.2 86 43.0
BolC3t13498H Brassica oleracea HOM05D002486 ORTHO05D002606 2.1e-08 62.4 76 47.4
Lj1g0009743 Lotus japonicus HOM05D002486 ORTHO05D002606 2.1e-08 62.4 76 44.7
BolC9t58726H Brassica oleracea HOM05D002486 ORTHO05D002606 2.7e-08 62.0 81 44.4
Glyma.19G112000 Glycine max HOM05D002486 ORTHO05D002606 2.7e-08 62.0 83 41.0
Prupe.7G004200 Prunus persica HOM05D002486 ORTHO05D002606 2.7e-08 62.0 80 38.8
A10p21350 Brassica napus HOM05D002486 ORTHO05D002606 3.5e-08 61.6 81 43.2
BraA10t44198Z Brassica rapa HOM05D002486 ORTHO05D002606 3.5e-08 61.6 81 43.2
Gohir.D11G269800 Gossypium hirsutum HOM05D002486 ORTHO05D002606 3.5e-08 61.6 81 42.0
Medtr6g029390 Medicago truncatula HOM05D002486 ORTHO05D002606 3.5e-08 61.6 76 43.4
PGSC0003DMG400003369 Solanum tuberosum HOM05D002486 ORTHO05D002606 3.5e-08 61.6 86 44.2
Atru.chr2.1382 Acer truncatum HOM05D002486 ORTHO05D002606 4.6e-08 61.2 82 45.1
Actinidia38614 Actinidia chinensis HOM05D002486 ORTHO05D002606 4.6e-08 61.2 80 43.8
Psat1g092160 Pisum sativum HOM05D002486 ORTHO05D002606 4.6e-08 61.2 76 46.1
BcaB08g36701 Brassica carinata HOM05D002486 ORTHO05D002606 6.0e-08 60.8 80 43.8
Duzib177G0910 Durio zibethinus HOM05D002486 ORTHO05D002606 6.0e-08 60.8 81 40.7
Duzib177G1131 Durio zibethinus HOM05D002486 ORTHO05D002606 6.0e-08 60.8 81 40.7
Glyma.16G041100 Glycine max HOM05D002486 ORTHO05D002606 6.0e-08 60.8 85 40.0
Potri.013G058200 Populus trichocarpa HOM05D002486 ORTHO05D002606 6.0e-08 60.8 79 41.8
COL.COLO4_13595 Corchorus olitorius HOM05D002486 ORTHO05D002606 7.8e-08 60.5 83 43.4
Gorai.007G289900 Gossypium raimondii HOM05D002486 ORTHO05D002606 7.8e-08 60.5 81 40.7
Potri.019G035000 Populus trichocarpa HOM05D002486 ORTHO05D002606 7.8e-08 60.5 78 44.9
BcaB01g05178 Brassica carinata HOM05D002486 ORTHO05D002606 1.0e-07 60.1 76 43.4
C03p10120 Brassica napus HOM05D002486 ORTHO05D002606 1.0e-07 60.1 76 43.4
BraA03t10191Z Brassica rapa HOM05D002486 ORTHO05D002606 1.0e-07 60.1 76 43.4
Peaxi162Scf00463g00001 Petunia axillaris HOM05D002486 ORTHO05D002606 1.0e-07 60.1 83 45.8
BcaB01g06400 Brassica carinata HOM05D002486 ORTHO05D002606 1.3e-07 59.7 76 48.7
CAN.G1001.29 Capsicum annuum HOM05D002486 ORTHO05D002606 1.3e-07 59.7 82 39.0
Manes.08G144400 Manihot esculenta HOM05D002486 ORTHO05D002606 1.3e-07 59.7 82 42.7
Medtr5g098200 Medicago truncatula HOM05D002486 ORTHO05D002606 1.3e-07 59.7 76 40.8
Duzib128G1093 Durio zibethinus HOM05D002486 ORTHO05D002606 1.7e-07 59.3 83 42.2
THA.LOC104820773 Tarenaya hassleriana HOM05D002486 ORTHO05D002606 1.7e-07 59.3 80 42.5
GSVIVG01001063001 Vitis vinifera HOM05D002486 ORTHO05D002606 1.7e-07 59.3 81 40.7
CANSAT78G1855 Cannabis sativa HOM05D002486 ORTHO05D002606 2.3e-07 58.9 86 44.2
Glyma.02G072300 Glycine max HOM05D002486 ORTHO05D002606 2.3e-07 58.9 76 47.4
BcaC03g13463 Brassica carinata HOM05D002486 ORTHO05D002606 3.0e-07 58.5 76 43.4
Carub.0006s1278 Capsella rubella HOM05D002486 ORTHO05D002606 3.0e-07 58.5 78 44.9
Cfa016443 Carpinus fangiana HOM05D002486 ORTHO05D002606 3.0e-07 58.5 79 43.0
Gohir.A11G259700 Gossypium hirsutum HOM05D002486 ORTHO05D002606 3.0e-07 58.5 78 41.0
TPR.G5914 Trifolium pratense HOM05D002486 ORTHO05D002606 3.0e-07 58.5 77 45.5
CARHR198710 Cardamine hirsuta HOM05D002486 ORTHO05D002606 3.9e-07 58.2 82 42.7
Aa31LG11G11450 Aethionema arabicum HOM05D002486 ORTHO05D002606 5.1e-07 57.8 80 42.5
arahy.Tifrunner.gnm1.ann1.GK9JFI Arachis hypogaea HOM05D002486 ORTHO05D002606 5.1e-07 57.8 85 41.2
Haze_24448 Corylus avellana HOM05D002486 ORTHO05D002606 5.1e-07 57.8 77 41.6
Lalb_Chr06g0173991 Lupinus albus HOM05D002486 ORTHO05D002606 5.1e-07 57.8 86 37.2
GSVIVG01033404001 Vitis vinifera HOM05D002486 ORTHO05D002606 5.1e-07 57.8 76 42.1
EL10Ac3g06824 Beta vulgaris HOM05D002486 ORTHO05D002606 6.6e-07 57.4 81 44.4
Eucgr.A02098 Eucalyptus grandis HOM05D002486 ORTHO05D002606 6.6e-07 57.4 82 40.2
Glyma.16G153500 Glycine max HOM05D002486 ORTHO05D002606 6.6e-07 57.4 76 44.7
Rhsim04G0087700 Rhododendron simsii HOM05D002486 ORTHO05D002606 6.6e-07 57.4 79 43.0
Thecc.05G294700 Theobroma cacao HOM05D002486 ORTHO05D002606 6.6e-07 57.4 78 38.5
TAR623G1300 Trochodendron aralioides HOM05D002486 ORTHO05D002606 6.6e-07 57.4 79 45.6
arahy.Tifrunner.gnm1.ann1.CLS04B Arachis hypogaea HOM05D002486 ORTHO05D002606 1.1e-06 56.6 78 43.6
Carub.0006s1644 Capsella rubella HOM05D002486 ORTHO05D002606 1.1e-06 56.6 80 42.5
CDE07G1433 Ceratophyllum demersum HOM05D002486 ORTHO05D002606 1.1e-06 56.6 80 42.5
Lalb_Chr02g0157121 Lupinus albus HOM05D002486 ORTHO05D002606 1.1e-06 56.6 85 38.8
TPR.G25748 Trifolium pratense HOM05D002486 ORTHO05D002606 1.1e-06 56.6 86 41.9
Cpa.g.sc51.116 Carica papaya HOM05D002486 ORTHO05D002606 1.5e-06 56.2 80 41.2
ClCG06G014220 Citrullus lanatus HOM05D002486 ORTHO05D002606 1.5e-06 56.2 77 44.2
Haze_19449 Corylus avellana HOM05D002486 ORTHO05D002606 1.5e-06 56.2 79 40.5
Migut.D00831 Erythranthe guttata HOM05D002486 ORTHO05D002606 1.5e-06 56.2 79 45.6
Lsat_1_v5_gn_6_37000 Lactuca sativa HOM05D002486 ORTHO05D002606 1.5e-06 56.2 80 43.8
THA.LOC104827276 Tarenaya hassleriana HOM05D002486 ORTHO05D002606 1.5e-06 56.2 80 42.5
CDE04G3004 Ceratophyllum demersum HOM05D002486 ORTHO05D002606 1.9e-06 55.8 80 42.5
Haze_19420 Corylus avellana HOM05D002486 ORTHO05D002606 1.9e-06 55.8 79 40.5
HanXRQChr13g0397721 Helianthus annuus HOM05D002486 ORTHO05D002606 1.9e-06 55.8 79 43.0
Sabra19G0045000 Salix brachista HOM05D002486 ORTHO05D002606 1.9e-06 55.8 79 39.2
BolC2t06645H Brassica oleracea HOM05D002486 ORTHO05D002606 2.5e-06 55.5 76 40.8
BolC2t06881H Brassica oleracea HOM05D002486 ORTHO05D002606 2.5e-06 55.5 80 41.2
BraA02t05435Z Brassica rapa HOM05D002486 ORTHO05D002606 2.5e-06 55.5 80 42.5
CARHR194910 Cardamine hirsuta HOM05D002486 ORTHO05D002606 2.5e-06 55.5 81 42.0
Manes.09G141300 Manihot esculenta HOM05D002486 ORTHO05D002606 2.5e-06 55.5 81 39.5
Thecc.09G361700 Theobroma cacao HOM05D002486 ORTHO05D002606 2.5e-06 55.5 81 38.3
TAR636G1900 Trochodendron aralioides HOM05D002486 ORTHO05D002606 2.5e-06 55.5 80 38.8
TAR636G3063 Trochodendron aralioides HOM05D002486 ORTHO05D002606 2.5e-06 55.5 80 38.8
ATR0737G176 Amborella trichopoda HOM05D002486 ORTHO05D002606 3.3e-06 55.1 79 41.8
CSS0015391 Camellia sinensis var. sinensis HOM05D002486 ORTHO05D002606 3.3e-06 55.1 79 40.5
Duzib168G0931 Durio zibethinus HOM05D002486 ORTHO05D002606 3.3e-06 55.1 84 40.5
MBI04_g38345_MAGBIO Magnolia biondii HOM05D002486 ORTHO05D002606 3.3e-06 55.1 79 45.6
Mapoly0027s0077 Marchantia polymorpha HOM05D002486 ORTHO05D002606 3.3e-06 55.1 76 36.8
Phvul.001G110700 Phaseolus vulgaris HOM05D002486 ORTHO05D002606 3.3e-06 55.1 81 37.0
TAR633G0180 Trochodendron aralioides HOM05D002486 ORTHO05D002606 3.3e-06 55.1 80 37.5
Cc06_g22980 Coffea canephora HOM05D002486 ORTHO05D002606 4.3e-06 54.7 87 35.6
DCAR_017052 Daucus carota HOM05D002486 ORTHO05D002606 4.3e-06 54.7 78 42.3
Thhalv10015170m.g Eutrema salsugineum HOM05D002486 ORTHO05D002606 4.3e-06 54.7 78 38.5
HanXRQChr02g0054231 Helianthus annuus HOM05D002486 ORTHO05D002606 4.3e-06 54.7 80 46.2
Medtr7g085610 Medicago truncatula HOM05D002486 ORTHO05D002606 4.3e-06 54.7 81 39.5
Nn2g10356 Nelumbo nucifera HOM05D002486 ORTHO05D002606 4.3e-06 54.7 78 43.6
Oeu024504.1 Olea europaea HOM05D002486 ORTHO05D002606 4.3e-06 54.7 82 40.2
BcaB05g23301 Brassica carinata HOM05D002486 ORTHO05D002606 5.6e-06 54.3 84 44.0
BcaC03g13580 Brassica carinata HOM05D002486 ORTHO05D002606 5.6e-06 54.3 78 41.0
BcaC03g13581 Brassica carinata HOM05D002486 ORTHO05D002606 5.6e-06 54.3 78 41.0
A02p04760 Brassica napus HOM05D002486 ORTHO05D002606 5.6e-06 54.3 78 42.3
Gohir.A11G296400 Gossypium hirsutum HOM05D002486 ORTHO05D002606 5.6e-06 54.3 81 38.3
Nn5g26900 Nelumbo nucifera HOM05D002486 ORTHO05D002606 5.6e-06 54.3 80 43.8
Sabra19G0042700 Salix brachista HOM05D002486 ORTHO05D002606 5.6e-06 54.3 79 39.2
Ah.04g153170 Amaranthus hybridus HOM05D002486 ORTHO05D002606 7.3e-06 53.9 83 42.2
Aqoxy2G00734 Aquilegia oxysepala HOM05D002486 ORTHO05D002606 7.3e-06 53.9 79 43.0
CARHR272210 Cardamine hirsuta HOM05D002486 ORTHO05D002606 7.3e-06 53.9 83 42.2
Nitab4.5_0000394g0010 Nicotiana tabacum HOM05D002486 ORTHO05D002606 7.3e-06 53.9 91 37.4
PGR042G1972 Punica granatum HOM05D002486 ORTHO05D002606 7.3e-06 53.9 80 37.5
AT5G14602 Arabidopsis thaliana HOM05D002486 ORTHO05D002606 9.6e-06 53.5 84 40.5
BcaNung03112 Brassica carinata HOM05D002486 ORTHO05D002606 9.6e-06 53.5 78 41.0
Ca_08265_v3 Cicer arietinum L. HOM05D002486 ORTHO05D002606 9.6e-06 53.5 77 42.9
Sabra13G0051700 Salix brachista HOM05D002486 ORTHO05D002606 9.6e-06 53.5 79 38.0


User provided reference genes

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