Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06889 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 5.8e-179 630.9 356 100.0
SEGI_06286 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 2.1e-165 585.9 356 94.1
SEGI_19830 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 3.3e-134 482.3 365 74.5
SEGI_19997 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 5.3e-116 421.8 417 62.4
SEGI_14808 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 3.1e-108 396.0 371 64.4
SEGI_09232 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 5.9e-107 391.7 363 65.3
SEGI_19331 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 1.3e-106 390.6 377 63.1
SEGI_38563 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 2.3e-95 353.2 327 66.1
SEGI_04661 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 6.3e-93 345.1 276 73.6
SEGI_30715 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 4.7e-72 275.8 363 49.9
SEGI_05188 Sequoiadendron giganteum HOM05D006269 ORTHO05D001487 2.8e-24 117.1 166 48.2
SEGI_15116 Sequoiadendron giganteum HOM05D006269 ORTHO05D001487 6.9e-15 85.9 178 35.4
SEGI_37331 Sequoiadendron giganteum HOM05D006269 ORTHO05D001487 1.4e-12 78.2 71 60.6
Potri.003G167500 Populus trichocarpa HOM05D002685 ORTHO05D001487 4.6e-11 73.2 331 25.7
PGR119G2530 Punica granatum HOM05D002685 ORTHO05D001487 6.0e-11 72.8 250 29.6
TAR365G1211 Trochodendron aralioides HOM05D002685 ORTHO05D001487 1.0e-10 72.0 167 32.9
Lj1C600T10 Lonicera japonica HOM05D002685 ORTHO05D001487 1.8e-10 71.2 141 36.2
Lj1C600T9 Lonicera japonica HOM05D002685 ORTHO05D001487 3.0e-10 70.5 164 34.8
Lj1C600G7 Lonicera japonica HOM05D002685 ORTHO05D001487 3.9e-10 70.1 164 34.8
CSS0035629 Camellia sinensis var. sinensis HOM05D002685 ORTHO05D001487 5.1e-10 69.7 166 30.7
Lsat_1_v5_gn_4_2061 Lactuca sativa HOM05D002685 ORTHO05D001487 8.7e-10 68.9 147 34.0
Sabra03G0122800 Salix brachista HOM05D002685 ORTHO05D001487 8.7e-10 68.9 336 26.5
ATR0582G338 Amborella trichopoda HOM05D002685 ORTHO05D001487 1.9e-09 67.8 178 34.3
vmacro01042 Vaccinium macrocarpon HOM05D002685 ORTHO05D001487 1.9e-09 67.8 190 31.6
MD16G1124100 Malus domestica HOM05D002685 ORTHO05D001487 1.6e-08 64.7 164 31.7
Prupe.1G221500 Prunus persica HOM05D002685 ORTHO05D001487 2.1e-08 64.3 340 28.5
TWI75G0855 Tripterygium wilfordii HOM05D002685 ORTHO05D001487 2.8e-08 63.9 136 34.6
HanXRQChr14g0451421 Helianthus annuus HOM05D002685 ORTHO05D001487 8.2e-08 62.4 141 31.9
SGA_v2.0_scaffold68G22835 Striga asiatica HOM05D002685 ORTHO05D001487 1.1e-07 62.0 104 41.3
COL.COLO4_24722 Corchorus olitorius HOM05D002685 ORTHO05D001487 1.4e-07 61.6 185 30.3
MD13G1123300 Malus domestica HOM05D002685 ORTHO05D001487 1.8e-07 61.2 193 30.1
ClCG07G015360 Citrullus lanatus HOM05D002685 ORTHO05D001487 2.4e-07 60.8 258 25.6
TAR629G1863 Trochodendron aralioides HOM05D002685 ORTHO05D001487 2.4e-07 60.8 220 27.3
Cpa.g.sc96.31 Carica papaya HOM05D002685 ORTHO05D001487 3.1e-07 60.5 162 32.7
Thecc.02G200000 Theobroma cacao HOM05D002685 ORTHO05D001487 3.1e-07 60.5 294 25.9
Psat3g186840 Pisum sativum HOM05D002685 ORTHO05D001487 5.3e-07 59.7 212 29.7
CANSAT01G2764 Cannabis sativa HOM05D002685 ORTHO05D001487 6.9e-07 59.3 319 26.6
Nitab4.5_0004556g0030 Nicotiana tabacum HOM05D002685 ORTHO05D001487 9.0e-07 58.9 255 26.7
PSO017G3972 Papaver somniferum HOM05D002685 ORTHO05D001487 9.0e-07 58.9 135 33.3
Solyc06g072430.3 Solanum lycopersicum HOM05D002685 ORTHO05D001487 1.5e-06 58.2 287 27.2
Actinidia08046 Actinidia chinensis HOM05D002685 ORTHO05D001487 2.0e-06 57.8 242 27.3
Gohir.A03G150201 Gossypium hirsutum HOM05D002685 ORTHO05D001487 2.0e-06 57.8 158 30.4
THA.LOC104825581 Tarenaya hassleriana HOM05D002685 ORTHO05D001487 2.0e-06 57.8 252 25.4
C08p40580 Brassica napus HOM05D002685 ORTHO05D001487 2.6e-06 57.4 94 37.2
CiPaw.05G105900 Carya illinoinensis HOM05D002685 ORTHO05D001487 2.6e-06 57.4 148 31.1
MBI07_g36513_MAGBIO Magnolia biondii HOM05D002685 ORTHO05D001487 2.6e-06 57.4 169 30.8
Manes.13G007700 Manihot esculenta HOM05D002685 ORTHO05D001487 2.6e-06 57.4 328 25.0
Sed0015254 Sechium edule HOM05D002685 ORTHO05D001487 2.6e-06 57.4 187 28.9
Haze_12458 Corylus avellana HOM05D002685 ORTHO05D001487 4.5e-06 56.6 74 45.9
MELO3C017749.2 Cucumis melo HOM05D002685 ORTHO05D001487 4.5e-06 56.6 340 26.5
Gorai.005G194700 Gossypium raimondii HOM05D002685 ORTHO05D001487 4.5e-06 56.6 230 27.0
Psat3g186800 Pisum sativum HOM05D002685 ORTHO05D001487 4.5e-06 56.6 186 29.0
Sopen06g028800 Solanum pennellii HOM05D002685 ORTHO05D001487 4.5e-06 56.6 286 27.6
Ah.02g131020 Amaranthus hybridus HOM05D002685 ORTHO05D001487 5.9e-06 56.2 137 28.5
vmacro13212 Vaccinium macrocarpon HOM05D006269 ORTHO05D001487 5.9e-06 56.2 69 50.7
Migut.K01013 Erythranthe guttata HOM05D002685 ORTHO05D001487 7.6e-06 55.8 235 28.9
Nitab4.5_0003251g0040 Nicotiana tabacum HOM05D002685 ORTHO05D001487 7.6e-06 55.8 268 26.9
PGSC0003DMG400041029 Solanum tuberosum HOM05D002685 ORTHO05D001487 7.6e-06 55.8 348 25.6
FAN10G2074 Fragaria x ananassa HOM05D006269 ORTHO05D001487 1.0e-05 55.5 100 40.0
FAN10G3724 Fragaria x ananassa HOM05D006269 ORTHO05D001487 1.0e-05 55.5 100 40.0
SalBow2G0376 Salvia bowleyana HOM05D002685 ORTHO05D001487 1.0e-05 55.5 194 30.4


User provided reference genes

Program Settings