Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 8.1e-157 557.0 274 100.0
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 2.4e-55 219.9 187 55.6
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.0e-55 219.2 261 46.0
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 9.0e-55 218.0 203 54.2
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 9.0e-55 218.0 177 59.3
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 9.0e-55 218.0 187 56.7
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 1.2e-54 217.6 214 50.9
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 1.5e-54 217.2 182 57.7
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 2.6e-54 216.5 185 56.8
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 2.6e-54 216.5 239 49.0
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 3.4e-54 216.1 238 48.3
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 4.4e-54 215.7 178 58.4
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 9.9e-54 214.5 182 56.6
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 1.3e-53 214.2 187 56.1
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 1.7e-53 213.8 185 56.2
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 2.2e-53 213.4 178 57.9
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.9e-53 213.0 244 46.3
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 4.9e-53 212.2 180 55.6
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 6.4e-53 211.8 179 56.4
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 6.4e-53 211.8 184 56.0
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 8.4e-53 211.5 244 46.3
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 8.4e-53 211.5 208 50.5
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.9e-52 210.3 182 55.5
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.2e-52 209.5 189 54.0
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 3.2e-52 209.5 175 55.4
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 4.2e-52 209.1 186 56.5
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 4.2e-52 209.1 181 56.4
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 5.4e-52 208.8 182 53.8
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 5.4e-52 208.8 181 55.8
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 5.4e-52 208.8 178 57.3
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 5.4e-52 208.8 199 52.3
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 5.4e-52 208.8 213 50.7
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 5.4e-52 208.8 209 50.2
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 7.1e-52 208.4 188 53.7
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 7.1e-52 208.4 281 42.0
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 1.2e-51 207.6 178 55.6
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 1.6e-51 207.2 177 57.1
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 1.6e-51 207.2 186 54.8
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 1.6e-51 207.2 193 54.4
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 4.6e-51 205.7 182 54.9
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 4.6e-51 205.7 183 55.2
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 6.0e-51 205.3 178 56.7
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 6.0e-51 205.3 175 54.9
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 6.0e-51 205.3 183 55.7
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 1.3e-50 204.1 178 55.6
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 1.3e-50 204.1 208 50.5
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 1.3e-50 204.1 179 54.2
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 2.3e-50 203.4 174 55.2
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.3e-50 203.4 182 54.4
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.3e-50 203.4 182 53.8
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 8.7e-50 201.4 181 55.8
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 1.1e-49 201.1 183 54.1
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 1.5e-49 200.7 183 53.0
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 1.9e-49 200.3 209 49.8
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 1.9e-49 200.3 179 52.5
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 2.5e-49 199.9 187 52.9
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 2.5e-49 199.9 187 52.4
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 3.3e-49 199.5 182 54.4
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 4.3e-49 199.1 182 53.3
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.3e-49 199.1 182 53.3
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 5.6e-49 198.7 182 53.3
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 9.6e-49 198.0 180 54.4
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 9.6e-49 198.0 189 51.9
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 2.1e-48 196.8 183 55.7
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 3.6e-48 196.1 214 45.3
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 6.2e-48 195.3 210 51.0
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 6.2e-48 195.3 187 51.9
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 8.1e-48 194.9 187 51.9
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 8.1e-48 194.9 181 53.0
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.1e-47 194.5 179 53.6
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 1.4e-47 194.1 185 53.0
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 1.4e-47 194.1 197 50.3
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 1.4e-47 194.1 194 50.5
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 1.8e-47 193.7 185 53.0
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 1.8e-47 193.7 187 51.9
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 2.4e-47 193.4 184 51.6
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 3.1e-47 193.0 185 53.0
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 3.1e-47 193.0 185 53.0
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 3.1e-47 193.0 185 53.0
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 3.1e-47 193.0 184 52.7
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 3.1e-47 193.0 188 50.0
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 6.9e-47 191.8 171 54.4
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 6.9e-47 191.8 184 53.3
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 5.8e-46 188.7 173 53.2
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 1.7e-45 187.2 202 49.5
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 2.9e-45 186.4 186 50.5
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 3.8e-45 186.0 188 50.5
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 4.9e-45 185.7 181 51.9
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 1.9e-44 183.7 185 52.4
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 2.4e-44 183.3 182 51.6
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 3.2e-44 183.0 175 50.3
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 5.4e-44 182.2 185 51.9
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 9.3e-44 181.4 189 50.3
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 1.8e-42 177.2 181 50.8
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 1.8e-42 177.2 181 51.4
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 2.3e-42 176.8 181 50.3
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 2.3e-42 176.8 205 43.4
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 5.1e-42 175.6 177 50.8
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 1.8e-39 167.2 138 55.1
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 5.8e-38 162.2 147 53.7
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 6.4e-37 158.7 180 45.6
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 3.2e-36 156.4 192 46.4
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 7.1e-36 155.2 158 50.0
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 3.4e-30 136.3 177 42.9
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 1.0e-29 134.8 178 41.0
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 1.3e-29 134.4 80 83.8
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 1.1e-28 131.3 198 38.4
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.9e-25 120.6 180 36.1
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 4.1e-23 112.8 141 44.7
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 2.5e-20 103.6 88 58.0
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 3.9e-18 96.3 94 44.7
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 5.1e-18 95.9 92 48.9
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.9e-17 94.0 173 35.8
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 1.3e-16 91.3 214 31.3
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 2.2e-13 80.5 65 58.5
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 6.5e-13 79.0 83 44.6
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 1.4e-10 71.2 189 31.2
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 2.3e-10 70.5 92 39.1


User provided reference genes

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