Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06803 Sequoiadendron giganteum HOM05D005295 ORTHO05D005962 6.5e-131 470.7 234 100.0
ATR0150G019 Amborella trichopoda HOM05D005295 ORTHO05D005962 1.2e-52 210.7 219 47.9
Phvul.005G075000 Phaseolus vulgaris HOM05D005295 ORTHO05D005962 2.0e-42 176.8 212 42.5
Medtr2g078650 Medicago truncatula HOM05D005295 ORTHO05D005962 2.6e-42 176.4 219 42.9
Mapoly0124s0020 Marchantia polymorpha HOM05D005295 ORTHO05D005962 3.3e-42 176.0 212 45.3
Psat0s1402g0040 Pisum sativum HOM05D005295 ORTHO05D005962 1.3e-41 174.1 217 42.9
VMungo1080G0752 Vigna mungo HOM05D005295 ORTHO05D005962 2.2e-41 173.3 218 42.2
Glyma.13G273800 Glycine max HOM05D005295 ORTHO05D005962 1.1e-40 171.0 213 41.3
Hma1.2p1_0387F.1_g141920 Hydrangea macrophylla HOM05D005295 ORTHO05D005962 1.8e-40 170.2 217 41.9
Lj3g0021836 Lotus japonicus HOM05D005295 ORTHO05D005962 1.8e-40 170.2 215 42.8
Lalb_Chr20g0109501 Lupinus albus HOM05D005295 ORTHO05D005962 1.8e-40 170.2 219 41.6
Lsat_1_v5_gn_5_128440 Lactuca sativa HOM05D005295 ORTHO05D005962 3.1e-40 169.5 246 40.2
Duzib213G0204 Durio zibethinus HOM05D005295 ORTHO05D005962 1.5e-39 167.2 237 38.8
CiPaw.11G171800 Carya illinoinensis HOM05D005295 ORTHO05D005962 2.0e-39 166.8 218 43.6
Migut.M00784 Erythranthe guttata HOM05D005295 ORTHO05D005962 2.0e-39 166.8 254 38.2
unitig_0.g1149 Utricularia gibba HOM05D005295 ORTHO05D005962 2.0e-39 166.8 227 43.6
TPR.G7946 Trifolium pratense HOM05D005295 ORTHO05D005962 2.6e-39 166.4 204 43.1
Haze_09452 Corylus avellana HOM05D005295 ORTHO05D005962 3.4e-39 166.0 234 39.7
SGA_v2.0_scaffold73G24237 Striga asiatica HOM05D005295 ORTHO05D005962 5.9e-39 165.2 231 40.3
Ciclev10009383m.g Citrus clementina HOM05D005295 ORTHO05D005962 1.0e-38 164.5 217 41.9
ECA234G3281 Erigeron canadensis HOM05D005295 ORTHO05D005962 1.0e-38 164.5 234 39.3
COL.COLO4_36711 Corchorus olitorius HOM05D005295 ORTHO05D005962 1.3e-38 164.1 228 39.9
HanXRQChr12g0361161 Helianthus annuus HOM05D005295 ORTHO05D005962 1.7e-38 163.7 240 37.5
GSVIVG01014296001 Vitis vinifera HOM05D005295 ORTHO05D005962 1.7e-38 163.7 223 42.2
Aa31LG5G9970 Aethionema arabicum HOM05D005295 ORTHO05D005962 2.2e-38 163.3 223 37.2
Ca_03531_v3 Cicer arietinum L. HOM05D005295 ORTHO05D005962 2.2e-38 163.3 218 41.3
Gorai.009G376000 Gossypium raimondii HOM05D005295 ORTHO05D005962 2.2e-38 163.3 229 40.2
SMO285G0011 Selaginella moellendorffii HOM05D005295 ORTHO05D005962 2.2e-38 163.3 207 42.5
Solyc12g013910.2 Solanum lycopersicum HOM05D005295 ORTHO05D005962 2.2e-38 163.3 243 39.9
Thecc.07G095500 Theobroma cacao HOM05D005295 ORTHO05D005962 2.2e-38 163.3 227 39.6
CSS0001236 Camellia sinensis var. sinensis HOM05D005295 ORTHO05D005962 2.9e-38 162.9 235 40.9
Cpa.g.sc622.2 Carica papaya HOM05D005295 ORTHO05D005962 2.9e-38 162.9 229 39.3
Oeu019302.2 Olea europaea HOM05D005295 ORTHO05D005962 2.9e-38 162.9 240 38.8
CAN.G213.18 Capsicum annuum HOM05D005295 ORTHO05D005962 3.8e-38 162.5 251 39.0
Gohir.A04G035200 Gossypium hirsutum HOM05D005295 ORTHO05D005962 3.8e-38 162.5 229 39.7
MD03G1231400 Malus domestica HOM05D005295 ORTHO05D005962 3.8e-38 162.5 218 38.1
Sopen12g005670 Solanum pennellii HOM05D005295 ORTHO05D005962 3.8e-38 162.5 243 39.1
Manes.03G106500 Manihot esculenta HOM05D005295 ORTHO05D005962 5.0e-38 162.2 227 40.5
Potri.011G116200 Populus trichocarpa HOM05D005295 ORTHO05D005962 6.5e-38 161.8 221 39.8
PGSC0003DMG400015366 Solanum tuberosum HOM05D005295 ORTHO05D005962 6.5e-38 161.8 248 38.7
SGA_v2.0_scaffold34G13800 Striga asiatica HOM05D005295 ORTHO05D005962 6.5e-38 161.8 241 38.2
Cc05_g11790 Coffea canephora HOM05D005295 ORTHO05D005962 1.1e-37 161.0 236 39.8
Cfa020562 Carpinus fangiana HOM05D005295 ORTHO05D005962 1.4e-37 160.6 227 40.1
CDE05G1939 Ceratophyllum demersum HOM05D005295 ORTHO05D005962 1.4e-37 160.6 221 39.4
Prupe.4G176600 Prunus persica HOM05D005295 ORTHO05D005962 1.4e-37 160.6 217 39.2
CDE05G3097 Ceratophyllum demersum HOM05D006331 ORTHO05D008043 1.9e-37 160.2 225 39.6
MELO3C025603.2 Cucumis melo HOM05D005295 ORTHO05D005962 1.9e-37 160.2 225 40.4
CsaV3_4G033520 Cucumis sativus L. HOM05D005295 ORTHO05D005962 1.9e-37 160.2 225 40.9
arahy.Tifrunner.gnm1.ann1.3CLR9I Arachis hypogaea HOM05D005295 ORTHO05D005962 2.5e-37 159.8 227 39.2
Sabra11G0101800 Salix brachista HOM05D005295 ORTHO05D005962 4.2e-37 159.1 220 39.5
THA.LOC104811877 Tarenaya hassleriana HOM05D005295 ORTHO05D005962 4.2e-37 159.1 218 36.7
arahy.Tifrunner.gnm1.ann1.B1NQ7W Arachis hypogaea HOM05D005295 ORTHO05D005962 5.5e-37 158.7 227 38.8
MBI02_g22345_MAGBIO Magnolia biondii HOM05D005295 ORTHO05D005962 7.2e-37 158.3 230 40.0
CANSAT56G1083 Cannabis sativa HOM05D005295 ORTHO05D005962 9.4e-37 157.9 238 37.0
Sabra16G0260000 Salix brachista HOM05D005295 ORTHO05D005962 9.4e-37 157.9 232 37.9
Ciclev10009380m.g Citrus clementina HOM05D005295 ORTHO05D005962 1.6e-36 157.1 220 40.0
Potri.001G396900 Populus trichocarpa HOM05D005295 ORTHO05D005962 2.7e-36 156.4 224 37.9
TWI39G0015 Tripterygium wilfordii HOM05D005295 ORTHO05D005962 2.7e-36 156.4 227 38.8
Actinidia12794 Actinidia chinensis HOM05D005295 ORTHO05D005962 3.6e-36 156.0 221 39.8
Eucgr.F01159 Eucalyptus grandis HOM05D005295 ORTHO05D005962 3.6e-36 156.0 233 38.6
ClCG11G017890 Citrullus lanatus HOM05D005295 ORTHO05D005962 4.7e-36 155.6 227 40.5
Sed0001385 Sechium edule HOM05D005295 ORTHO05D005962 4.7e-36 155.6 221 37.6
PGR083G0729 Punica granatum HOM05D005295 ORTHO05D005962 6.1e-36 155.2 223 39.9
BraA01t01821Z Brassica rapa HOM05D005295 ORTHO05D005962 1.0e-35 154.5 228 35.5
Nn1g04175 Nelumbo nucifera HOM05D005295 ORTHO05D005962 1.8e-35 153.7 239 39.3
Pp3c9_10810 Physcomitrium patens HOM05D005295 ORTHO05D005962 2.3e-35 153.3 207 42.0
SalBow8G4458 Salvia bowleyana HOM05D005295 ORTHO05D005962 3.9e-35 152.5 236 36.9
Aqoxy1G02337 Aquilegia oxysepala HOM05D005295 ORTHO05D005962 5.2e-35 152.1 237 38.0
Carub.0007s1331 Capsella rubella HOM05D005295 ORTHO05D005962 6.7e-35 151.8 230 35.7
Thhalv10026112m.g Eutrema salsugineum HOM05D005295 ORTHO05D005962 6.7e-35 151.8 233 36.1
Peaxi162Scf00000g00314 Petunia axillaris HOM05D005295 ORTHO05D005962 8.8e-35 151.4 244 37.3
A01p18770 Brassica napus HOM05D005295 ORTHO05D005962 2.6e-34 149.8 235 35.3
PSO675G2991 Papaver somniferum HOM05D005295 ORTHO05D005962 2.6e-34 149.8 257 34.6
TWI38G0013 Tripterygium wilfordii HOM05D005295 ORTHO05D005962 2.6e-34 149.8 227 35.7
AT4G27540 Arabidopsis thaliana HOM05D005295 ORTHO05D005962 3.3e-34 149.4 235 35.3
C01p23710 Brassica napus HOM05D005295 ORTHO05D005962 4.4e-34 149.1 236 34.7
Lj8A154T78 Lonicera japonica HOM05D005295 ORTHO05D005962 7.4e-34 148.3 249 35.7
BcaNung06687 Brassica carinata HOM05D005295 ORTHO05D005962 9.7e-34 147.9 236 34.7
AL7G25230 Arabidopsis lyrata HOM05D005295 ORTHO05D005962 1.3e-33 147.5 235 34.5
BolC1t02323H Brassica oleracea HOM05D005295 ORTHO05D005962 1.3e-33 147.5 236 34.3
CARHR235220 Cardamine hirsuta HOM05D005295 ORTHO05D005962 1.3e-33 147.5 236 35.2
EL10Ac4g08225 Beta vulgaris HOM05D005295 ORTHO05D005962 1.7e-33 147.1 248 35.5
Sp7g25480 Schrenkiella parvula HOM05D005295 ORTHO05D005962 1.7e-33 147.1 235 34.5
Hund22882 Selenicereus undatus HOM05D005295 ORTHO05D005962 1.7e-33 147.1 252 36.5
Atru.chr2.2424 Acer truncatum HOM05D005295 ORTHO05D005962 8.2e-33 144.8 244 37.3
BcaNung06688 Brassica carinata HOM05D005295 ORTHO05D005962 8.2e-33 144.8 237 33.8
Rhsim06G0201600 Rhododendron simsii HOM05D005295 ORTHO05D005962 2.4e-32 143.3 234 37.6
Ah.06g184530 Amaranthus hybridus HOM05D005295 ORTHO05D005962 5.3e-32 142.1 252 33.7
AUR62036172 Chenopodium quinoa HOM05D005295 ORTHO05D005962 9.1e-32 141.4 253 33.2
Gohir.D05G348200 Gossypium hirsutum HOM05D005295 ORTHO05D005962 1.7e-30 137.1 229 37.1
Sc16g0007150 Simmondsia chinensis HOM05D005295 ORTHO05D005962 3.8e-30 136.0 211 35.5
MSTRG.6822 Avicennia marina HOM05D005295 ORTHO05D005962 2.5e-29 133.3 196 38.3
FAN21G0215 Fragaria x ananassa HOM05D005295 ORTHO05D005962 2.5e-29 133.3 224 34.4
BolC2t07912H Brassica oleracea HOM05D005295 ORTHO05D005962 3.2e-29 132.9 221 32.1
Nitab4.5_0000332g0010 Nicotiana tabacum HOM05D005295 ORTHO05D005962 3.2e-29 132.9 262 34.7
FAN25G2205 Fragaria x ananassa HOM05D005295 ORTHO05D005962 5.5e-29 132.1 224 33.9
BcaC03g14369 Brassica carinata HOM05D005295 ORTHO05D005962 9.4e-29 131.3 221 32.1
FvH4_3g19520 Fragaria vesca HOM05D005295 ORTHO05D005962 9.4e-29 131.3 224 34.4
HPP92_003730 Vanilla planifolia HOM05D005295 ORTHO05D005962 9.4e-29 131.3 237 35.9
RcHm_v2.0_Chr5g0032761 Rosa chinensis HOM05D005295 ORTHO05D005962 1.2e-28 131.0 226 33.6
C02p17850 Brassica napus HOM05D005295 ORTHO05D005962 4.7e-28 129.0 221 32.1
FAN11G0135 Fragaria x ananassa HOM05D005295 ORTHO05D005962 6.1e-28 128.6 220 34.5
BcaB05g22086 Brassica carinata HOM05D005295 ORTHO05D005962 1.0e-27 127.9 219 31.5
DCAR_013119 Daucus carota HOM05D005295 ORTHO05D005962 1.8e-27 127.1 195 39.0
Zm00001eb231100 Zea mays HOM05D005295 ORTHO05D005962 4.4e-26 122.5 232 32.3
AUR62019458 Chenopodium quinoa HOM05D005295 ORTHO05D005962 5.7e-26 122.1 226 32.7
BcaC03g14372 Brassica carinata HOM05D005295 ORTHO05D005962 9.7e-26 121.3 223 31.8
BolC2t07916H Brassica oleracea HOM05D005295 ORTHO05D005962 9.7e-26 121.3 223 31.8
QL08p022700 Quercus lobata HOM05D005295 ORTHO05D005962 5.9e-23 112.1 337 26.7
C02p17830 Brassica napus HOM05D005295 ORTHO05D005962 1.3e-22 110.9 147 35.4
A02p10710 Brassica napus HOM05D005295 ORTHO05D005962 8.5e-22 108.2 204 30.4
BraA02t06134Z Brassica rapa HOM05D005295 ORTHO05D005962 1.5e-21 107.5 204 29.9
Thhalv10015755m.g Eutrema salsugineum HOM05D005295 ORTHO05D005962 1.6e-20 104.0 147 36.7
vmacro11885 Vaccinium macrocarpon HOM05D005295 ORTHO05D005962 1.8e-19 100.5 207 35.3
AagrBONN_evm.TU.Sc2ySwM_117.1842 Anthoceros agrestis HOM05D005295 ORTHO05D005962 1.2e-15 87.8 137 39.4
Os09g0134400 Oryza sativa ssp. japonica HOM05D005295 ORTHO05D005962 2.0e-15 87.0 238 26.5
Ciclev10010240m.g Citrus clementina HOM05D005295 ORTHO05D005962 5.5e-13 79.0 223 28.7
Eucgr.F01198 Eucalyptus grandis HOM05D005295 ORTHO05D005962 1.2e-12 77.8 141 34.8
Dinv14935 Davidia involucrata HOM05D005295 ORTHO05D005962 6.1e-12 75.5 133 36.1
CBR_g39602 Chara braunii HOM05D005295 ORTHO05D005962 8.0e-12 75.1 272 25.4
Lj1C840T8 Lonicera japonica HOM05D005295 ORTHO05D005962 4.0e-11 72.8 125 35.2
Carub.0003s1487 Capsella rubella HOM05D005295 ORTHO05D005962 6.8e-11 72.0 146 31.5
MD06G1175000 Malus domestica HOM05D005295 ORTHO05D005962 5.7e-10 68.9 104 34.6
Dinv12314 Davidia involucrata HOM05D005295 ORTHO05D005962 8.3e-09 65.1 125 31.2
BcaNung07036 Brassica carinata HOM05D005295 ORTHO05D005962 1.8e-08 63.9 80 36.2
BcaB04g20941 Brassica carinata HOM05D001464 ORTHO05D005962 2.4e-08 63.5 125 32.8
Hma1.2p1_0387F.1_g141930 Hydrangea macrophylla HOM05D005295 ORTHO05D005962 2.7e-07 60.1 85 35.3
C01p49340 Brassica napus HOM05D005295 ORTHO05D005962 4.5e-07 59.3 110 34.5
BcaC09g48479 Brassica carinata HOM05D005295 ORTHO05D005962 5.9e-07 58.9 110 34.5
BolC1t04893H Brassica oleracea HOM05D005295 ORTHO05D005962 5.9e-07 58.9 110 34.5
A01p38800 Brassica napus HOM05D005295 ORTHO05D005962 7.8e-07 58.5 110 35.5
BraA01t03927Z Brassica rapa HOM05D005295 ORTHO05D005962 7.8e-07 58.5 110 35.5


User provided reference genes

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