Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06772 Sequoiadendron giganteum HOM05D027346 ORTHO05D014681 0.0e+00 1191.0 618 100.0
SEGI_34252 Sequoiadendron giganteum HOM05D000285 ORTHO05D384387 2.4e-140 503.4 550 57.3
SEGI_02346 Sequoiadendron giganteum HOM05D001759 ORTHO05D014681 2.9e-93 347.1 308 63.0
SEGI_35050 Sequoiadendron giganteum HOM05D000222 ORTHO05D014681 9.6e-89 332.0 265 68.7
SEGI_19337 Sequoiadendron giganteum HOM05D000222 ORTHO05D014681 8.7e-82 308.9 284 62.0
SEGI_33195 Sequoiadendron giganteum HOM05D000928 ORTHO05D001186 1.4e-71 275.0 172 80.2
SEGI_41297 Sequoiadendron giganteum HOM05D027346 ORTHO05D014681 1.5e-70 271.6 282 56.7
SEGI_24890 Sequoiadendron giganteum HOM05D000222 ORTHO05D014681 2.6e-62 244.2 268 54.9
SEGI_33059 Sequoiadendron giganteum HOM05D000928 ORTHO05D001186 9.1e-47 192.6 171 61.4
SEGI_13223 Sequoiadendron giganteum HOM05D000222 ORTHO05D014681 1.2e-38 165.6 168 58.9
SEGI_17940 Sequoiadendron giganteum HOM05D000222 ORTHO05D014681 1.0e-37 162.5 146 63.0
SEGI_04159 Sequoiadendron giganteum HOM05D000222 ORTHO05D014681 2.0e-30 138.3 165 55.8
SEGI_00919 Sequoiadendron giganteum HOM05D000222 ORTHO05D014681 1.5e-28 132.1 190 45.3
SEGI_15398 Sequoiadendron giganteum HOM05D000222 ORTHO05D014681 3.2e-28 131.0 116 62.9
SEGI_15565 Sequoiadendron giganteum HOM05D027346 ORTHO05D386681 5.0e-21 107.1 112 51.8
SEGI_38723 Sequoiadendron giganteum HOM05D000222 ORTHO05D014681 1.6e-19 102.1 102 56.9
SEGI_06087 Sequoiadendron giganteum HOM05D002303 ORTHO05D014681 3.6e-19 100.9 89 59.6
SEGI_35476 Sequoiadendron giganteum HOM05D000285 ORTHO05D000241 7.0e-15 86.7 46 87.0
SEGI_37262 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.7e-13 82.0 82 57.3
SEGI_12519 Sequoiadendron giganteum HOM05D027346 ORTHO05D387293 1.6e-11 75.5 42 78.6
SEGI_20119 Sequoiadendron giganteum HOM05D001645 ORTHO05D385260 2.1e-11 75.1 189 34.4
SEGI_24282 Sequoiadendron giganteum HOM05D000222 ORTHO05D014681 3.4e-09 67.8 104 48.1
Lsat_1_v5_gn_9_10141 Lactuca sativa HOM05D000285 ORTHO05D000241 3.2e-07 61.2 47 63.8
Potri.002G258600 Populus trichocarpa HOM05D000285 ORTHO05D000241 3.2e-07 61.2 46 69.6
Sabra02G0196800 Salix brachista HOM05D000285 ORTHO05D000241 4.1e-07 60.8 46 67.4
SEGI_36245 Sequoiadendron giganteum HOM05D000681 ORTHO05D386544 4.1e-07 60.8 38 76.3
TAR365G0858 Trochodendron aralioides HOM05D000285 ORTHO05D000241 1.6e-06 58.9 90 40.0
FAN15G1588 Fragaria x ananassa HOM05D000285 ORTHO05D000241 2.0e-06 58.5 45 60.0
Potri.014G195300 Populus trichocarpa HOM05D000285 ORTHO05D000241 2.7e-06 58.2 50 60.0
Nitab4.5_0012489g0020 Nicotiana tabacum HOM05D000222 ORTHO05D000329 3.5e-06 57.8 119 37.8
ClCG07G001290 Citrullus lanatus HOM05D000285 ORTHO05D000241 4.6e-06 57.4 49 61.2
MELO3C012850.2 Cucumis melo HOM05D000285 ORTHO05D000241 4.6e-06 57.4 49 61.2
Atru.chr1.353 Acer truncatum HOM05D000222 ORTHO05D000329 6.0e-06 57.0 73 46.6
CBR_g8635 Chara braunii HOM05D000222 ORTHO05D000329 6.0e-06 57.0 51 56.9
CsaV3_3G028220 Cucumis sativus L. HOM05D000285 ORTHO05D000241 6.0e-06 57.0 46 63.0
MBI07_g11126_MAGBIO Magnolia biondii HOM05D000285 ORTHO05D000241 6.0e-06 57.0 43 65.1
CBR_g23606 Chara braunii HOM05D000222 ORTHO05D000329 7.8e-06 56.6 51 54.9
MELO3C006935.2 Cucumis melo HOM05D000222 ORTHO05D000329 7.8e-06 56.6 99 40.4
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 7.8e-06 56.6 48 62.5
Lj1C1005T7 Lonicera japonica HOM05D000222 ORTHO05D000329 7.8e-06 56.6 90 41.1
Lj2A1144T88 Lonicera japonica HOM05D000285 ORTHO05D000241 7.8e-06 56.6 52 53.8
Nitab4.5_0008522g0060 Nicotiana tabacum HOM05D000222 ORTHO05D000329 7.8e-06 56.6 119 37.0
Peaxi162Scf00444g00238 Petunia axillaris HOM05D000222 ORTHO05D000329 7.8e-06 56.6 92 41.3


User provided reference genes

Program Settings