Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06721 Sequoiadendron giganteum HOM05D004183 ORTHO05D005022 7.7e-92 340.5 176 100.0
ATR0810G041 Amborella trichopoda HOM05D004183 ORTHO05D005022 7.3e-26 121.3 181 43.1
AagrBONN_evm.TU.Sc2ySwM_344.1225 Anthoceros agrestis HOM05D004183 ORTHO05D005022 1.7e-19 100.1 154 42.2
CDE11G0898 Ceratophyllum demersum HOM05D004183 ORTHO05D005022 7.3e-18 94.7 157 42.0
CANSAT78G1267 Cannabis sativa HOM05D004183 ORTHO05D005022 3.6e-17 92.4 135 45.9
Haze_19348 Corylus avellana HOM05D004183 ORTHO05D005022 1.1e-16 90.9 178 38.2
RcHm_v2.0_Chr1g0321111 Rosa chinensis HOM05D004183 ORTHO05D005022 1.8e-16 90.1 179 36.9
RcHm_v2.0_Chr1g0319811 Rosa chinensis HOM05D004183 ORTHO05D005022 3.1e-16 89.4 179 36.3
RcHm_v2.0_Chr1g0320601 Rosa chinensis HOM05D004183 ORTHO05D005022 3.1e-16 89.4 179 36.3
MD10G1031900 Malus domestica HOM05D004183 ORTHO05D005022 4.0e-16 89.0 178 36.5
vmacro06007 Vaccinium macrocarpon HOM05D004183 ORTHO05D005022 6.9e-16 88.2 156 38.5
CSS0046717 Camellia sinensis var. sinensis HOM05D004183 ORTHO05D005022 4.5e-15 85.5 157 40.1
CsaV3_2G035420 Cucumis sativus L. HOM05D004183 ORTHO05D005022 4.5e-15 85.5 137 40.1
Dinv04533 Davidia involucrata HOM05D004183 ORTHO05D005022 5.8e-15 85.1 154 38.3
MELO3C019211.2 Cucumis melo HOM05D004183 ORTHO05D005022 9.9e-15 84.3 137 39.4
Mapoly0026s0116 Marchantia polymorpha HOM05D004183 ORTHO05D005022 9.9e-15 84.3 139 37.4
Manes.10G067101 Manihot esculenta HOM05D004183 ORTHO05D005022 1.3e-14 84.0 136 39.0
Prupe.2G030300 Prunus persica HOM05D004183 ORTHO05D005022 1.3e-14 84.0 140 41.4
TPR.G7801 Trifolium pratense HOM05D004183 ORTHO05D005022 1.7e-14 83.6 135 40.7
Rhsim03G0265100 Rhododendron simsii HOM05D004183 ORTHO05D005022 2.2e-14 83.2 154 37.0
Thecc.07G183400 Theobroma cacao HOM05D004183 ORTHO05D005022 2.2e-14 83.2 135 42.2
Actinidia11211 Actinidia chinensis HOM05D004183 ORTHO05D005022 2.9e-14 82.8 156 37.2
Pp3c1_12830 Physcomitrium patens HOM05D004183 ORTHO05D005022 3.8e-14 82.4 135 38.5
ClCG06G014020 Citrullus lanatus HOM05D004183 ORTHO05D005022 4.9e-14 82.0 140 40.0
FvH4_7g02460 Fragaria vesca HOM05D004183 ORTHO05D005022 6.4e-14 81.6 136 42.6
FAN06G5080 Fragaria x ananassa HOM05D004183 ORTHO05D005022 6.4e-14 81.6 136 42.6
FAN10G3177 Fragaria x ananassa HOM05D004183 ORTHO05D005022 6.4e-14 81.6 178 37.6
Cpa.g.sc178.30 Carica papaya HOM05D004183 ORTHO05D005022 1.1e-13 80.9 135 43.0
PGR102G1375 Punica granatum HOM05D004183 ORTHO05D005022 1.1e-13 80.9 136 41.2
Ca_17037_v3 Cicer arietinum L. HOM05D004183 ORTHO05D005022 1.4e-13 80.5 136 39.7
FAN03G0165 Fragaria x ananassa HOM05D004183 ORTHO05D005022 1.9e-13 80.1 135 42.2
Os07g0455100 Oryza sativa ssp. japonica HOM05D004183 ORTHO05D005022 1.9e-13 80.1 179 33.5
Zm00001eb096590 Zea mays HOM05D004183 ORTHO05D005022 1.9e-13 80.1 161 34.2
EL10Ac8g19353 Beta vulgaris HOM05D004183 ORTHO05D005022 3.2e-13 79.3 154 37.0
Nn5g26963 Nelumbo nucifera HOM05D004183 ORTHO05D005022 3.2e-13 79.3 164 36.6
Ah.09g232030 Amaranthus hybridus HOM05D004183 ORTHO05D005022 5.4e-13 78.6 149 36.9
Psat5g056520 Pisum sativum HOM05D004183 ORTHO05D005022 5.4e-13 78.6 136 39.0
SHI30096 Sapria himalayana HOM05D004183 ORTHO05D005022 7.1e-13 78.2 138 37.0
Lj1g0005856 Lotus japonicus HOM05D004183 ORTHO05D005022 1.2e-12 77.4 139 38.8
AUR62031284 Chenopodium quinoa HOM05D004183 ORTHO05D005022 1.6e-12 77.0 156 36.5
GSVIVG01000237001 Vitis vinifera HOM05D004183 ORTHO05D005022 2.1e-12 76.6 158 34.8
arahy.Tifrunner.gnm1.ann1.RUK03S Arachis hypogaea HOM05D004183 ORTHO05D005022 2.7e-12 76.3 180 35.0
AUR62027369 Chenopodium quinoa HOM05D004183 ORTHO05D005022 2.7e-12 76.3 154 35.7
DCAR_009033 Daucus carota HOM05D004183 ORTHO05D005022 2.7e-12 76.3 135 39.3
arahy.Tifrunner.gnm1.ann1.4S33SI Arachis hypogaea HOM05D004183 ORTHO05D005022 4.6e-12 75.5 180 35.0
Medtr3g098060 Medicago truncatula HOM05D004183 ORTHO05D005022 6.0e-12 75.1 136 38.2
HanXRQChr15g0484541 Helianthus annuus HOM05D004183 ORTHO05D005022 7.9e-12 74.7 135 37.8
RcHm_v2.0_Chr1g0319861 Rosa chinensis HOM05D004183 ORTHO05D005022 7.9e-12 74.7 165 35.2
Sc24g0002700 Simmondsia chinensis HOM05D004183 ORTHO05D005022 7.9e-12 74.7 137 34.3
Sed0016560 Sechium edule HOM05D004183 ORTHO05D005022 1.0e-11 74.3 138 40.6
CBR_g19343 Chara braunii HOM05D004183 ORTHO05D005022 1.3e-11 73.9 171 28.7
Ciclev10033525m.g Citrus clementina HOM05D004183 ORTHO05D005022 1.3e-11 73.9 154 36.4
Cc03_g10770 Coffea canephora HOM05D004183 ORTHO05D005022 1.3e-11 73.9 136 35.3
Duzib106G0093 Durio zibethinus HOM05D004183 ORTHO05D005022 1.3e-11 73.9 138 37.0
Lalb_Chr08g0237701 Lupinus albus HOM05D004183 ORTHO05D005022 1.3e-11 73.9 135 38.5
TWI75G1732 Tripterygium wilfordii HOM05D004183 ORTHO05D005022 1.8e-11 73.6 140 37.1
Eucgr.H05055 Eucalyptus grandis HOM05D004183 ORTHO05D005022 2.3e-11 73.2 138 36.2
Atru.chr3.3380 Acer truncatum HOM05D004183 ORTHO05D005022 3.0e-11 72.8 136 39.7
Duzib268G1261 Durio zibethinus HOM05D004183 ORTHO05D005022 3.0e-11 72.8 135 37.8
Phvul.009G160200 Phaseolus vulgaris HOM05D004183 ORTHO05D005022 3.0e-11 72.8 169 33.7
Glyma.06G161100 Glycine max HOM05D004183 ORTHO05D005022 3.9e-11 72.4 137 38.7
VMungo1309G0357 Vigna mungo HOM05D004183 ORTHO05D005022 3.9e-11 72.4 144 39.6
Glyma.04G204500 Glycine max HOM05D004183 ORTHO05D005022 5.1e-11 72.0 135 37.8
COL.COLO4_14587 Corchorus olitorius HOM05D004183 ORTHO05D005022 6.7e-11 71.6 138 38.4
Gohir.D01G083800 Gossypium hirsutum HOM05D004183 ORTHO05D005022 6.7e-11 71.6 141 36.2
Phvul.009G192300 Phaseolus vulgaris HOM05D004183 ORTHO05D005022 1.1e-10 70.9 144 35.4
Migut.N00455 Erythranthe guttata HOM05D004183 ORTHO05D005022 1.5e-10 70.5 135 37.8
Gorai.002G109500 Gossypium raimondii HOM05D004183 ORTHO05D005022 1.9e-10 70.1 141 35.5
Lsat_1_v5_gn_3_54960 Lactuca sativa HOM05D004183 ORTHO05D005022 1.9e-10 70.1 135 33.3
Solyc07g008760.4 Solanum lycopersicum HOM05D004183 ORTHO05D005022 2.5e-10 69.7 138 34.8
Aqoxy7G00086 Aquilegia oxysepala HOM05D004183 ORTHO05D005022 4.3e-10 68.9 140 35.0
Gohir.A01G099200 Gossypium hirsutum HOM05D004183 ORTHO05D005022 4.3e-10 68.9 135 36.3
Sopen07g004700 Solanum pennellii HOM05D004183 ORTHO05D005022 4.3e-10 68.9 138 34.1
PSO063G6994 Papaver somniferum HOM05D004183 ORTHO05D005022 7.4e-10 68.2 137 33.6
CAN.G333.6 Capsicum annuum HOM05D004183 ORTHO05D005022 1.3e-09 67.4 138 34.8
VMungo1309G0778 Vigna mungo HOM05D004183 ORTHO05D005022 1.6e-09 67.0 136 40.4
COL.COLO4_19761 Corchorus olitorius HOM05D004183 ORTHO05D005022 3.7e-09 65.9 127 38.6
PSO782G1025 Papaver somniferum HOM05D004183 ORTHO05D005022 3.7e-09 65.9 137 32.8
Nitab4.5_0000617g0040 Nicotiana tabacum HOM05D004183 ORTHO05D005022 8.1e-09 64.7 135 32.6
Peaxi162Scf01600g00023 Petunia axillaris HOM05D004183 ORTHO05D005022 8.1e-09 64.7 140 33.6
Ciclev10030817m.g Citrus clementina HOM05D004183 ORTHO05D005022 1.1e-08 64.3 135 40.0
ECA246G4622 Erigeron canadensis HOM05D004183 ORTHO05D005022 1.8e-08 63.5 133 35.3
Sabra04G0053600 Salix brachista HOM05D004183 ORTHO05D005022 1.8e-08 63.5 149 31.5
CARHR195930 Cardamine hirsuta HOM05D004183 ORTHO05D005022 4.0e-08 62.4 134 32.1
AL6G28330 Arabidopsis lyrata HOM05D004183 ORTHO05D005022 5.3e-08 62.0 134 33.6
Nitab4.5_0010834g0010 Nicotiana tabacum HOM05D004183 ORTHO05D005022 9.0e-08 61.2 135 31.9
A03p08250 Brassica napus HOM05D004183 ORTHO05D005022 1.5e-07 60.5 134 31.3
THA.LOC104827224 Tarenaya hassleriana HOM05D004183 ORTHO05D005022 1.5e-07 60.5 134 35.8
Aa31LG11G12400 Aethionema arabicum HOM05D004183 ORTHO05D005022 2.6e-07 59.7 134 32.8
AT5G17270 Arabidopsis thaliana HOM05D004183 ORTHO05D005022 2.6e-07 59.7 134 32.8
MSTRG.24596 Avicennia marina HOM05D004183 ORTHO05D005022 2.6e-07 59.7 138 34.1
Carub.0006s1546 Capsella rubella HOM05D004183 ORTHO05D005022 2.6e-07 59.7 132 31.8
Oeu006040.1 Olea europaea HOM05D004183 ORTHO05D005022 2.6e-07 59.7 135 29.6
BcaB01g05214 Brassica carinata HOM05D004183 ORTHO05D005022 3.4e-07 59.3 134 29.9
AL6G28350 Arabidopsis lyrata HOM05D004183 ORTHO05D005022 4.5e-07 58.9 134 32.8
C03p09610 Brassica napus HOM05D004183 ORTHO05D005022 4.5e-07 58.9 134 30.6
BolC3t13450H Brassica oleracea HOM05D004183 ORTHO05D005022 5.8e-07 58.5 134 29.9
Ciclev10033738m.g Citrus clementina HOM05D004183 ORTHO05D005022 5.8e-07 58.5 120 35.0
BraA03t10145Z Brassica rapa HOM05D004183 ORTHO05D005022 9.9e-07 57.8 134 29.9
AT5G37130 Arabidopsis thaliana HOM05D004183 ORTHO05D005022 1.3e-06 57.4 134 32.8
Thhalv10012633m.g Eutrema salsugineum HOM05D004183 ORTHO05D005022 1.3e-06 57.4 134 31.3
Sp6g26960 Schrenkiella parvula HOM05D004183 ORTHO05D005022 1.3e-06 57.4 134 30.6
BolC9t58828H Brassica oleracea HOM05D004183 ORTHO05D005022 2.9e-06 56.2 157 29.3
Potri.004G080800 Populus trichocarpa HOM05D004183 ORTHO05D005022 2.9e-06 56.2 144 29.9
unitig_8.g5004 Utricularia gibba HOM05D004183 ORTHO05D005022 2.9e-06 56.2 125 36.0
SGA_v2.0_scaffold7G03721 Striga asiatica HOM05D004183 ORTHO05D005022 3.8e-06 55.8 141 30.5
HPP92_011016 Vanilla planifolia HOM05D004183 ORTHO05D005022 4.9e-06 55.5 168 29.8


User provided reference genes

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