Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06718 Sequoiadendron giganteum HOM05D048395 ORTHO05D050927 1.4e-66 256.1 127 100.0
SEGI_01329 Sequoiadendron giganteum HOM05D048395 ORTHO05D050927 6.0e-46 187.6 91 100.0
SEGI_30064 Sequoiadendron giganteum HOM05D003316 ORTHO05D003690 9.9e-33 143.7 70 100.0
TAR627G0616 Trochodendron aralioides HOM05D003316 ORTHO05D003690 1.0e-08 63.9 90 47.8
unitig_37.g12202 Utricularia gibba HOM05D003316 ORTHO05D003690 8.5e-08 60.8 65 50.8
Nn7g37833 Nelumbo nucifera HOM05D003316 ORTHO05D003690 1.9e-07 59.7 99 39.4
THA.LOC104813611 Tarenaya hassleriana HOM05D003316 ORTHO05D003690 2.5e-07 59.3 76 46.1
Aa31LG4G1840 Aethionema arabicum HOM05D003316 ORTHO05D003690 3.2e-07 58.9 93 43.0
Sed0025744 Sechium edule HOM05D003316 ORTHO05D003690 3.2e-07 58.9 65 49.2
Sopen07g034730 Solanum pennellii HOM05D003316 ORTHO05D003690 7.2e-07 57.8 68 50.0
SGA_v2.0_scaffold239G44036 Striga asiatica HOM05D003316 ORTHO05D003690 7.2e-07 57.8 81 45.7
Nitab4.5_0000747g0040 Nicotiana tabacum HOM05D003316 ORTHO05D003690 9.4e-07 57.4 80 46.2
Nitab4.5_0003929g0010 Nicotiana tabacum HOM05D003316 ORTHO05D003690 9.4e-07 57.4 80 46.2
CSS0025565 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 1.2e-06 57.0 95 42.1
Peaxi162Scf00452g00411 Petunia axillaris HOM05D003316 ORTHO05D003690 1.2e-06 57.0 82 42.7
PGSC0003DMG400022120 Solanum tuberosum HOM05D003316 ORTHO05D003690 1.2e-06 57.0 79 46.8
Sp5g34220 Schrenkiella parvula HOM05D003316 ORTHO05D003690 1.6e-06 56.6 83 42.2
Sed0001262 Sechium edule HOM05D003316 ORTHO05D003690 1.6e-06 56.6 86 43.0
MSTRG.13075 Avicennia marina HOM05D003316 ORTHO05D003690 2.1e-06 56.2 79 44.3
CSS0004609 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 2.1e-06 56.2 99 39.4
CSS0033846 Camellia sinensis var. sinensis HOM05D003316 ORTHO05D003690 2.1e-06 56.2 99 39.4
Psat1g005840 Pisum sativum HOM05D003316 ORTHO05D003690 2.1e-06 56.2 75 46.7
ATR0763G052 Amborella trichopoda HOM05D003316 ORTHO05D003690 2.7e-06 55.8 62 50.0
AL2G39640 Arabidopsis lyrata HOM05D003316 ORTHO05D003690 2.7e-06 55.8 84 42.9
BcaB02g08670 Brassica carinata HOM05D003316 ORTHO05D003690 2.7e-06 55.8 102 38.2
Carub.0001s1625 Capsella rubella HOM05D003316 ORTHO05D003690 2.7e-06 55.8 97 38.1
Potri.007G067300 Populus trichocarpa HOM05D003316 ORTHO05D003690 2.7e-06 55.8 80 45.0
Solyc07g066570.4 Solanum lycopersicum HOM05D003316 ORTHO05D003690 2.7e-06 55.8 68 48.5
TWI38G0778 Tripterygium wilfordii HOM05D003316 ORTHO05D003690 2.7e-06 55.8 76 44.7
Prupe.4G136500 Prunus persica HOM05D003316 ORTHO05D003690 3.6e-06 55.5 84 41.7
Actinidia12775 Actinidia chinensis HOM05D003316 ORTHO05D003690 4.7e-06 55.1 78 44.9
MELO3C012614.2 Cucumis melo HOM05D003316 ORTHO05D003690 4.7e-06 55.1 86 41.9
CsaV3_7G022850 Cucumis sativus L. HOM05D003316 ORTHO05D003690 4.7e-06 55.1 86 41.9
Dinv42487 Davidia involucrata HOM05D003316 ORTHO05D003690 4.7e-06 55.1 80 43.8
Cc05_g16270 Coffea canephora HOM05D003316 ORTHO05D003690 6.1e-06 54.7 95 38.9
Duzib187G1768 Durio zibethinus HOM05D003316 ORTHO05D003690 6.1e-06 54.7 87 40.2
Eucgr.F04447 Eucalyptus grandis HOM05D003316 ORTHO05D003690 6.1e-06 54.7 80 43.8
ClCG09G022660 Citrullus lanatus HOM05D003316 ORTHO05D003690 7.9e-06 54.3 81 43.2
Phvul.005G051100 Phaseolus vulgaris HOM05D003316 ORTHO05D003690 7.9e-06 54.3 108 37.0
Potri.005G096800 Populus trichocarpa HOM05D003316 ORTHO05D003690 7.9e-06 54.3 92 39.1


User provided reference genes

Program Settings