Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06703 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.5e-63 246.1 134 100.0
SEGI_41081 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 8.8e-56 220.3 134 89.6
SEGI_37700 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 4.7e-49 198.0 125 83.2
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 9.1e-45 183.7 131 71.8
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 4.5e-44 181.4 118 78.0
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 7.7e-44 180.6 131 71.8
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 1.3e-43 179.9 129 72.1
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 1.3e-43 179.9 129 72.1
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.7e-43 179.5 130 71.5
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.7e-43 179.5 130 71.5
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 2.9e-43 178.7 129 74.4
Solyc05g012340.4 Solanum lycopersicum HOM05D001391 ORTHO05D005432 6.6e-43 177.6 123 75.6
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 6.6e-43 177.6 123 75.6
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 8.6e-43 177.2 127 70.9
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 8.6e-43 177.2 130 70.0
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 1.9e-42 176.0 129 69.8
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 3.3e-42 175.3 128 68.0
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 3.3e-42 175.3 129 71.3
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 4.2e-42 174.9 118 76.3
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 4.2e-42 174.9 121 74.4
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 4.2e-42 174.9 122 73.0
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 5.6e-42 174.5 118 74.6
Rhsim12G0074900 Rhododendron simsii HOM05D001391 ORTHO05D005432 5.6e-42 174.5 131 68.7
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 9.5e-42 173.7 118 74.6
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 1.2e-41 173.3 127 70.9
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 1.2e-41 173.3 118 72.9
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 1.6e-41 172.9 129 69.8
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 2.1e-41 172.6 118 74.6
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 2.8e-41 172.2 133 65.4
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 3.6e-41 171.8 118 75.4
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 4.7e-41 171.4 118 73.7
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 4.7e-41 171.4 118 73.7
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 4.7e-41 171.4 118 73.7
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 6.1e-41 171.0 134 67.2
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 6.1e-41 171.0 130 69.2
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 6.1e-41 171.0 118 73.7
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 6.1e-41 171.0 130 65.4
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 8.0e-41 170.6 129 68.2
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 8.0e-41 170.6 129 68.2
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 1.0e-40 170.2 130 69.2
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 1.0e-40 170.2 120 71.7
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 1.4e-40 169.9 129 68.2
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 1.4e-40 169.9 131 70.2
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 1.4e-40 169.9 118 72.9
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 1.4e-40 169.9 139 64.7
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 2.3e-40 169.1 131 67.2
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 3.0e-40 168.7 118 72.9
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 4.0e-40 168.3 118 72.0
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 4.0e-40 168.3 133 64.7
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 4.0e-40 168.3 118 73.7
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 6.8e-40 167.5 132 65.2
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 8.9e-40 167.2 118 72.9
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 1.2e-39 166.8 125 66.4
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 1.2e-39 166.8 129 64.3
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 1.5e-39 166.4 129 67.4
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 1.5e-39 166.4 123 67.5
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 2.0e-39 166.0 118 71.2
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 2.6e-39 165.6 118 70.3
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 2.6e-39 165.6 118 70.3
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 2.6e-39 165.6 118 70.3
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 2.6e-39 165.6 131 64.1
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 2.6e-39 165.6 132 65.9
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 3.4e-39 165.2 127 66.9
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 3.4e-39 165.2 125 65.6
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 4.4e-39 164.9 118 69.5
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 4.4e-39 164.9 118 72.9
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 4.4e-39 164.9 118 72.0
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 4.4e-39 164.9 121 67.8
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 4.4e-39 164.9 118 75.4
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 7.5e-39 164.1 129 65.1
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 7.5e-39 164.1 118 70.3
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 7.5e-39 164.1 121 67.8
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 7.5e-39 164.1 121 67.8
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 7.5e-39 164.1 121 67.8
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 7.5e-39 164.1 121 67.8
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 9.8e-39 163.7 118 69.5
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 9.8e-39 163.7 117 69.2
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 9.8e-39 163.7 118 71.2
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 1.3e-38 163.3 118 68.6
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 1.7e-38 162.9 131 61.8
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 1.7e-38 162.9 117 69.2
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 1.7e-38 162.9 121 66.9
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 1.7e-38 162.9 121 66.9
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 2.2e-38 162.5 131 61.8
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 2.9e-38 162.2 130 66.2
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 2.9e-38 162.2 118 72.0
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 4.9e-38 161.4 131 61.1
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 1.1e-37 160.2 118 72.0
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 1.1e-37 160.2 137 61.3
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 1.1e-37 160.2 129 62.0
HanXRQChr08g0223901 Helianthus annuus HOM05D001391 ORTHO05D005432 1.1e-37 160.2 118 69.5
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 1.4e-37 159.8 129 62.0
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 1.4e-37 159.8 129 62.0
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 1.4e-37 159.8 129 62.0
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 1.4e-37 159.8 129 62.0
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 1.4e-37 159.8 121 66.1
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 2.4e-37 159.1 129 61.2
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 2.4e-37 159.1 129 61.2
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 2.4e-37 159.1 129 61.2
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 2.4e-37 159.1 135 63.7
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 2.4e-37 159.1 133 61.7
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 7.0e-37 157.5 129 61.2
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 1.2e-36 156.8 122 69.7
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 1.2e-36 156.8 117 65.0
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 2.0e-36 156.0 117 72.6
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 2.0e-36 156.0 117 70.9
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 2.7e-36 155.6 118 66.9
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 2.7e-36 155.6 118 66.1
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 2.3e-35 152.5 118 66.1
Gorai.008G177300 Gossypium raimondii HOM05D001391 ORTHO05D005432 2.3e-35 152.5 119 68.9
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 5.0e-35 151.4 130 63.1
Gohir.D12G164650 Gossypium hirsutum HOM05D001391 ORTHO05D005432 6.6e-35 151.0 119 68.9
CSS0036366 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 8.6e-35 150.6 129 64.3
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 1.5e-34 149.8 104 76.0
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 1.9e-34 149.4 118 67.8
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 2.5e-34 149.1 130 62.3
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 2.5e-34 149.1 143 57.3
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 7.3e-34 147.5 118 63.6
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 1.2e-33 146.7 105 72.4
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 1.2e-33 146.7 107 69.2
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 2.1e-33 146.0 104 72.1
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 4.7e-33 144.8 155 55.5
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 8.0e-33 144.1 106 69.8
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 2.0e-31 139.4 127 60.6
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 9.8e-31 137.1 96 70.8
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 1.3e-30 136.7 118 63.6
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 1.7e-30 136.3 105 70.5
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 4.9e-30 134.8 104 67.3
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 6.4e-30 134.4 130 60.0
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 3.2e-29 132.1 104 72.1
Hund25180 Selenicereus undatus HOM05D001391 ORTHO05D005432 3.2e-29 132.1 86 74.4
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 4.6e-28 128.3 105 63.8
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 6.6e-27 124.4 101 70.3
SEGI_28419 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 7.3e-26 120.9 86 72.1
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 7.5e-23 110.9 79 67.1
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 7.5e-23 110.9 79 67.1
Gohir.A13G082366 Gossypium hirsutum HOM05D001391 ORTHO05D005432 8.3e-22 107.5 88 61.4
ClCG08G010360 Citrullus lanatus HOM05D001391 ORTHO05D005432 2.3e-16 89.4 68 69.1
Phvul.002G102100 Phaseolus vulgaris HOM05D001391 ORTHO05D005432 2.9e-14 82.4 72 58.3
Dinv16729 Davidia involucrata HOM05D001391 ORTHO05D005432 8.4e-14 80.9 68 64.7
QL01p050911 Quercus lobata HOM05D001391 ORTHO05D005432 1.1e-10 70.5 68 54.4
BcaB07g30295 Brassica carinata HOM05D001391 ORTHO05D005432 4.3e-10 68.6 68 51.5
Sc11g0002420 Simmondsia chinensis HOM05D001391 ORTHO05D005432 3.6e-09 65.5 68 55.9
QL03p071882 Quercus lobata HOM05D001391 ORTHO05D005432 6.8e-08 61.2 68 54.4


User provided reference genes

Program Settings