Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06659 Sequoiadendron giganteum HOM05D000402 ORTHO05D384252 3.5e-91 338.2 160 100.0
SEGI_03970 Sequoiadendron giganteum HOM05D000402 ORTHO05D000263 3.3e-17 92.4 52 84.6
SEGI_15051 Sequoiadendron giganteum HOM05D000402 ORTHO05D000263 4.3e-17 92.0 52 84.6
SEGI_38145 Sequoiadendron giganteum HOM05D000402 ORTHO05D000263 2.8e-16 89.4 52 82.7
SEGI_35737 Sequoiadendron giganteum HOM05D000402 ORTHO05D000263 4.8e-16 88.6 52 82.7
SEGI_35157 Sequoiadendron giganteum HOM05D000402 ORTHO05D000263 1.1e-15 87.4 52 80.8
PGSC0003DMG400018712 Solanum tuberosum HOM05D000402 ORTHO05D000263 6.3e-08 61.6 52 53.8
PGSC0003DMG400018713 Solanum tuberosum HOM05D000402 ORTHO05D000263 1.1e-07 60.8 52 53.8
Nitab4.5_0002567g0020 Nicotiana tabacum HOM05D000402 ORTHO05D000263 1.4e-07 60.5 52 53.8
Nitab4.5_0009952g0010 Nicotiana tabacum HOM05D000402 ORTHO05D000263 1.4e-07 60.5 52 53.8
Peaxi162Scf00217g01214 Petunia axillaris HOM05D000402 ORTHO05D000263 1.4e-07 60.5 52 53.8
Solyc11g071460.2 Solanum lycopersicum HOM05D000402 ORTHO05D000263 2.4e-07 59.7 52 51.9
TAR633G2204 Trochodendron aralioides HOM05D000402 ORTHO05D000263 2.4e-07 59.7 52 53.8
CDE08G0688 Ceratophyllum demersum HOM05D000402 ORTHO05D000263 3.1e-07 59.3 52 53.8
Sopen11g029130 Solanum pennellii HOM05D000402 ORTHO05D000263 3.1e-07 59.3 52 51.9
PGSC0003DMG400018591 Solanum tuberosum HOM05D000402 ORTHO05D000263 3.1e-07 59.3 52 51.9
TAR636G3428 Trochodendron aralioides HOM05D000402 ORTHO05D000263 5.3e-07 58.5 52 51.9
Oeu051590.1 Olea europaea HOM05D000402 ORTHO05D000263 6.9e-07 58.2 52 50.0
Peaxi162Scf00217g01212 Petunia axillaris HOM05D000402 ORTHO05D000263 6.9e-07 58.2 52 51.9
Dinv05237 Davidia involucrata HOM05D002604 ORTHO05D003070 9.0e-07 57.8 52 50.0
Nitab4.5_0002567g0010 Nicotiana tabacum HOM05D000402 ORTHO05D000263 9.0e-07 57.8 52 51.9
SEGI_35091 Sequoiadendron giganteum HOM05D000402 ORTHO05D000263 9.0e-07 57.8 52 51.9
SEGI_03437 Sequoiadendron giganteum HOM05D000402 ORTHO05D000263 1.2e-06 57.4 48 52.1
SEGI_38317 Sequoiadendron giganteum HOM05D000402 ORTHO05D000263 1.2e-06 57.4 48 52.1
ATR0068G104 Amborella trichopoda HOM05D000402 ORTHO05D000263 1.5e-06 57.0 56 51.8
Potri.004G235600 Populus trichocarpa HOM05D000402 ORTHO05D000263 1.5e-06 57.0 52 53.8
SEGI_29553 Sequoiadendron giganteum HOM05D000402 ORTHO05D000263 1.5e-06 57.0 52 48.1
GSVIVG01026833001 Vitis vinifera HOM05D000402 ORTHO05D000263 1.5e-06 57.0 52 53.8
Ciclev10024172m.g Citrus clementina HOM05D000402 ORTHO05D000263 2.0e-06 56.6 52 50.0
GSVIVG01037467001 Vitis vinifera HOM05D000402 ORTHO05D000263 2.0e-06 56.6 52 53.8
SEGI_23561 Sequoiadendron giganteum HOM05D000402 ORTHO05D000263 3.4e-06 55.8 52 50.0
SGA_v2.0_scaffold29G12125 Striga asiatica HOM05D000402 ORTHO05D000263 3.4e-06 55.8 52 50.0
Aqoxy7G00372 Aquilegia oxysepala HOM05D000402 ORTHO05D000263 4.5e-06 55.5 52 53.8
Migut.D00713 Erythranthe guttata HOM05D000402 ORTHO05D000263 4.5e-06 55.5 52 50.0
Hma1.2p1_0218F.1_g092580 Hydrangea macrophylla HOM05D000402 ORTHO05D000263 4.5e-06 55.5 52 51.9
Duzib168G0644 Durio zibethinus HOM05D000402 ORTHO05D000263 5.9e-06 55.1 52 50.0
HanXRQChr04g0119141 Helianthus annuus HOM05D000402 ORTHO05D000263 5.9e-06 55.1 56 46.4
SEGI_16702 Sequoiadendron giganteum HOM05D000402 ORTHO05D000263 5.9e-06 55.1 48 52.1
Zm00001eb427310 Zea mays HOM05D000402 ORTHO05D000263 5.9e-06 55.1 77 36.4
COL.COLO4_25278 Corchorus olitorius HOM05D000402 ORTHO05D000263 7.7e-06 54.7 52 50.0
Potri.004G235500 Populus trichocarpa HOM05D000402 ORTHO05D000263 7.7e-06 54.7 52 51.9
SEGI_18111 Sequoiadendron giganteum HOM05D000498 ORTHO05D000354 7.7e-06 54.7 32 81.2
SEGI_23049 Sequoiadendron giganteum HOM05D000402 ORTHO05D000263 7.7e-06 54.7 48 50.0
TAR636G3450 Trochodendron aralioides HOM05D000402 ORTHO05D000263 7.7e-06 54.7 52 51.9
CBR_g38759 Chara braunii HOM05D000402 ORTHO05D000263 1.0e-05 54.3 52 55.8
Nn7g38038 Nelumbo nucifera HOM05D000402 ORTHO05D000263 1.0e-05 54.3 52 50.0


User provided reference genes

Program Settings