Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06531 Sequoiadendron giganteum HOM05D000038 ORTHO05D000423 3.3e-58 228.0 106 100.0
SEGI_41567 Sequoiadendron giganteum HOM05D000038 ORTHO05D000423 9.8e-26 120.2 100 54.0
SEGI_30288 Sequoiadendron giganteum HOM05D000038 ORTHO05D000423 1.7e-22 109.4 101 51.5
SEGI_00131 Sequoiadendron giganteum HOM05D000038 ORTHO05D000423 5.0e-22 107.8 102 49.0
SEGI_00119 Sequoiadendron giganteum HOM05D000038 ORTHO05D000423 5.6e-21 104.4 94 52.1
SEGI_31318 Sequoiadendron giganteum HOM05D000038 ORTHO05D000423 1.5e-18 96.3 104 43.3
SEGI_06985 Sequoiadendron giganteum HOM05D000038 ORTHO05D000423 2.6e-18 95.5 103 45.6
SEGI_28019 Sequoiadendron giganteum HOM05D000038 ORTHO05D000423 4.9e-17 91.3 103 44.7
SEGI_34790 Sequoiadendron giganteum HOM05D000038 ORTHO05D000423 7.8e-15 84.0 104 42.3
Aqoxy4G00245 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 2.3e-14 82.4 88 45.5
Eucgr.K03234 Eucalyptus grandis HOM05D000038 ORTHO05D000423 1.9e-13 79.3 94 40.4
Aqoxy4G00246 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 4.3e-13 78.2 93 40.9
Eucgr.K03230 Eucalyptus grandis HOM05D000038 ORTHO05D000423 4.3e-13 78.2 94 39.4
Eucgr.L01598 Eucalyptus grandis HOM05D000038 ORTHO05D000423 9.5e-13 77.0 88 42.0
Cpa.g.sc50.59 Carica papaya HOM05D000038 ORTHO05D000423 1.6e-12 76.3 98 40.8
Dinv01650 Davidia involucrata HOM05D000038 ORTHO05D000423 2.1e-12 75.9 110 36.4
Dinv12361 Davidia involucrata HOM05D000038 ORTHO05D000423 2.1e-12 75.9 110 36.4
HPP92_008756 Vanilla planifolia HOM05D000038 ORTHO05D000423 2.1e-12 75.9 98 38.8
Eucgr.K03222 Eucalyptus grandis HOM05D000038 ORTHO05D000423 3.6e-12 75.1 102 38.2
Eucgr.K03236 Eucalyptus grandis HOM05D000038 ORTHO05D000423 3.6e-12 75.1 100 38.0
TAR629G0237 Trochodendron aralioides HOM05D000038 ORTHO05D000423 4.7e-12 74.7 87 39.1
HPP92_020069 Vanilla planifolia HOM05D000038 ORTHO05D000423 4.7e-12 74.7 92 40.2
Aqoxy3G01238 Aquilegia oxysepala HOM05D001422 ORTHO05D000423 6.2e-12 74.3 97 36.1
Eucgr.K01177 Eucalyptus grandis HOM05D000038 ORTHO05D000423 6.2e-12 74.3 90 41.1
Nn3g21098 Nelumbo nucifera HOM05D000038 ORTHO05D000423 8.1e-12 73.9 97 41.2
Oeu030083.1 Olea europaea HOM05D000038 ORTHO05D000423 8.1e-12 73.9 90 38.9
Aqoxy2G03971 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 2.3e-11 72.4 87 40.2
MBI06_g18690_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000423 4.0e-11 71.6 100 38.0
QL02p078418 Quercus lobata HOM05D000038 ORTHO05D000423 4.0e-11 71.6 103 33.0
Aqoxy4G02061 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 6.8e-11 70.9 91 40.7
QL02p077194 Quercus lobata HOM05D000038 ORTHO05D000423 1.2e-10 70.1 61 42.6
Migut.H02125 Erythranthe guttata HOM05D000038 ORTHO05D000423 1.5e-10 69.7 105 37.1
Eucgr.L02352 Eucalyptus grandis HOM05D000038 ORTHO05D000423 1.5e-10 69.7 99 36.4
Os02g0234450 Oryza sativa ssp. japonica HOM05D000038 ORTHO05D000423 1.5e-10 69.7 97 34.0
Aqoxy4G00248 Aquilegia oxysepala HOM05D001422 ORTHO05D000423 2.0e-10 69.3 96 34.4
TAR482G0002 Trochodendron aralioides HOM05D000038 ORTHO05D000423 3.4e-10 68.6 109 33.9
CAN.G803.17 Capsicum annuum HOM05D000038 ORTHO05D000423 5.8e-10 67.8 90 35.6
PGR142G0972 Punica granatum HOM05D000038 ORTHO05D000423 5.8e-10 67.8 104 33.7
PGSC0003DMG400017331 Solanum tuberosum HOM05D000038 ORTHO05D000423 7.6e-10 67.4 91 35.2
Gohir.D13G030300 Gossypium hirsutum HOM05D000038 ORTHO05D000423 9.9e-10 67.0 107 33.6
Peaxi162Scf00154g01023 Petunia axillaris HOM05D000038 ORTHO05D000423 9.9e-10 67.0 91 35.2
Duzib235G1113 Durio zibethinus HOM05D000038 ORTHO05D000423 1.3e-09 66.6 101 36.6
PGR142G0181 Punica granatum HOM05D000038 ORTHO05D000423 1.3e-09 66.6 104 34.6
Rhsim06G0123700 Rhododendron simsii HOM05D000038 ORTHO05D000423 1.3e-09 66.6 91 36.3
Atru.chr10.1544 Acer truncatum HOM05D000038 ORTHO05D000423 1.7e-09 66.2 94 35.1
Solyc07g055690.1 Solanum lycopersicum HOM05D000038 ORTHO05D000423 1.7e-09 66.2 91 36.3
Sopen07g029050 Solanum pennellii HOM05D000038 ORTHO05D000423 1.7e-09 66.2 91 36.3
GSVIVG01020794001 Vitis vinifera HOM05D000037 ORTHO05D000423 1.7e-09 66.2 106 34.0
Migut.H02126 Erythranthe guttata HOM05D000038 ORTHO05D000423 2.2e-09 65.9 105 35.2
QL08p042647 Quercus lobata HOM05D000038 ORTHO05D000423 2.2e-09 65.9 106 34.9
Aqoxy4G00240 Aquilegia oxysepala HOM05D001422 ORTHO05D000423 2.9e-09 65.5 106 34.0
Cc05_g08990 Coffea canephora HOM05D000038 ORTHO05D000423 2.9e-09 65.5 94 35.1
Eucgr.K01180 Eucalyptus grandis HOM05D000038 ORTHO05D000423 2.9e-09 65.5 106 34.0
Aqoxy4G00271 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 3.8e-09 65.1 107 35.5
Eucgr.K01182 Eucalyptus grandis HOM05D000038 ORTHO05D000423 3.8e-09 65.1 109 34.9
HPP92_021769 Vanilla planifolia HOM05D000038 ORTHO05D000423 3.8e-09 65.1 91 36.3
GSVIVG01020771001 Vitis vinifera HOM05D000038 ORTHO05D000423 3.8e-09 65.1 94 34.0
Cc05_g08980 Coffea canephora HOM05D000038 ORTHO05D000423 4.9e-09 64.7 94 34.0
Nn3g21097 Nelumbo nucifera HOM05D000038 ORTHO05D000423 4.9e-09 64.7 66 45.5
Oeu022845.1 Olea europaea HOM05D000038 ORTHO05D000423 4.9e-09 64.7 107 32.7
Rhsim06G0124600 Rhododendron simsii HOM05D000038 ORTHO05D000423 4.9e-09 64.7 90 35.6
Actinidia11182 Actinidia chinensis HOM05D000038 ORTHO05D000423 6.4e-09 64.3 102 31.4
Gorai.013G034500 Gossypium raimondii HOM05D000038 ORTHO05D000423 6.4e-09 64.3 99 34.3
QL08p042629 Quercus lobata HOM05D000038 ORTHO05D000423 6.4e-09 64.3 95 33.7
Rhsim06G0125000 Rhododendron simsii HOM05D000038 ORTHO05D000423 6.4e-09 64.3 105 35.2
Cc04_g08370 Coffea canephora HOM05D000038 ORTHO05D000423 8.4e-09 63.9 104 33.7
Nitab4.5_0003133g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 8.4e-09 63.9 104 33.7
Nitab4.5_0005259g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 8.4e-09 63.9 102 34.3
HPP92_008754 Vanilla planifolia HOM05D000038 ORTHO05D000423 8.4e-09 63.9 91 36.3
Lj1A628T7 Lonicera japonica HOM05D000038 ORTHO05D000423 1.1e-08 63.5 108 29.6
Ciclev10017695m.g Citrus clementina HOM05D000038 ORTHO05D000423 1.4e-08 63.2 91 35.2
Eucgr.K03237 Eucalyptus grandis HOM05D000038 ORTHO05D000423 1.4e-08 63.2 98 32.7
PGR142G0667 Punica granatum HOM05D000038 ORTHO05D000423 1.4e-08 63.2 88 37.5
Zm00001eb239040 Zea mays HOM05D000038 ORTHO05D000423 1.4e-08 63.2 93 32.3
Aqoxy4G00274 Aquilegia oxysepala HOM05D001422 ORTHO05D000423 1.9e-08 62.8 105 31.4
Dinv18374 Davidia involucrata HOM05D000038 ORTHO05D000423 1.9e-08 62.8 102 35.3
Eucgr.K01181 Eucalyptus grandis HOM05D000038 ORTHO05D000423 1.9e-08 62.8 84 36.9
MBI07_g00444_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D048545 1.9e-08 62.8 91 38.5
QL93p0205_0085 Quercus lobata HOM05D000038 ORTHO05D000423 1.9e-08 62.8 92 34.8
PGSC0003DMG400017330 Solanum tuberosum HOM05D000038 ORTHO05D000423 1.9e-08 62.8 104 32.7
Atru.chr10.1533 Acer truncatum HOM05D000038 ORTHO05D000423 2.4e-08 62.4 105 33.3
Nitab4.5_0000883g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 2.4e-08 62.4 105 33.3
SEGI_05178 Sequoiadendron giganteum HOM05D000038 ORTHO05D000423 2.4e-08 62.4 54 50.0
vmacro12415 Vaccinium macrocarpon HOM05D000038 ORTHO05D000423 2.4e-08 62.4 111 33.3
vmacro12426 Vaccinium macrocarpon HOM05D000038 ORTHO05D000423 2.4e-08 62.4 92 35.9
CAN.G803.18 Capsicum annuum HOM05D000038 ORTHO05D000423 3.2e-08 62.0 81 35.8
Ciclev10014371m.g Citrus clementina HOM05D000038 ORTHO05D000423 3.2e-08 62.0 91 35.2
Eucgr.K01186 Eucalyptus grandis HOM05D001422 ORTHO05D000423 3.2e-08 62.0 108 35.2
vmacro12424 Vaccinium macrocarpon HOM05D000038 ORTHO05D000423 3.2e-08 62.0 106 30.2
Eucgr.K01175 Eucalyptus grandis HOM05D000038 ORTHO05D000423 4.1e-08 61.6 97 34.0
Gohir.A13G023166 Gossypium hirsutum HOM05D000038 ORTHO05D000423 4.1e-08 61.6 98 32.7
ATR0665G012 Amborella trichopoda HOM05D000038 ORTHO05D000423 5.4e-08 61.2 105 33.3
Gohir.D13G030200 Gossypium hirsutum HOM05D000038 ORTHO05D000423 5.4e-08 61.2 99 32.3
QL02p077182 Quercus lobata HOM05D000038 ORTHO05D000423 5.4e-08 61.2 102 30.4
QL02p078321 Quercus lobata HOM05D000038 ORTHO05D011614 5.4e-08 61.2 90 33.3
vmacro12425 Vaccinium macrocarpon HOM05D000038 ORTHO05D000423 5.4e-08 61.2 99 29.3
Nitab4.5_0001651g0090 Nicotiana tabacum HOM05D000038 ORTHO05D000423 7.1e-08 60.8 91 33.0
Rhsim06G0124900 Rhododendron simsii HOM05D000038 ORTHO05D000423 7.1e-08 60.8 97 30.9
Peaxi162Scf00154g00092 Petunia axillaris HOM05D000038 ORTHO05D000423 9.2e-08 60.5 91 31.9
TAR410G0004 Trochodendron aralioides HOM05D000038 ORTHO05D000423 9.2e-08 60.5 89 32.6
Cc05_g08940 Coffea canephora HOM05D000038 ORTHO05D000423 1.2e-07 60.1 91 35.2
Duzib187G0801 Durio zibethinus HOM05D000038 ORTHO05D000423 1.2e-07 60.1 94 35.1
Lj1C629T1 Lonicera japonica HOM05D000038 ORTHO05D000423 1.2e-07 60.1 108 30.6
PGR142G2626 Punica granatum HOM05D000038 ORTHO05D000423 1.2e-07 60.1 96 32.3
QL02p075644 Quercus lobata HOM05D000038 ORTHO05D000423 1.2e-07 60.1 98 34.7
QL02p078208 Quercus lobata HOM05D000038 ORTHO05D000423 1.2e-07 60.1 90 32.2
CSS0017627 Camellia sinensis var. sinensis HOM05D000038 ORTHO05D000423 1.6e-07 59.7 90 34.4
Duzib235G1388 Durio zibethinus HOM05D000038 ORTHO05D000423 1.6e-07 59.7 92 34.8
Gohir.A13G018800 Gossypium hirsutum HOM05D000038 ORTHO05D000423 1.6e-07 59.7 99 32.3
Gorai.013G034400 Gossypium raimondii HOM05D000038 ORTHO05D000423 1.6e-07 59.7 99 32.3
Nn1g02085 Nelumbo nucifera HOM05D000038 ORTHO05D000423 1.6e-07 59.7 72 37.5
PGR142G0140 Punica granatum HOM05D000038 ORTHO05D000423 1.6e-07 59.7 96 31.2
RhsimUnG0189800 Rhododendron simsii HOM05D000038 ORTHO05D000423 1.6e-07 59.7 77 33.8
Sopen07g029040 Solanum pennellii HOM05D000038 ORTHO05D000423 1.6e-07 59.7 104 31.7
CAN.G803.19 Capsicum annuum HOM05D000038 ORTHO05D000423 2.1e-07 59.3 104 33.7
Nn2g10314 Nelumbo nucifera HOM05D000038 ORTHO05D000423 2.1e-07 59.3 61 39.3
PGR142G3627 Punica granatum HOM05D000038 ORTHO05D000423 2.1e-07 59.3 96 31.2
vmacro12427 Vaccinium macrocarpon HOM05D000038 ORTHO05D000423 2.1e-07 59.3 104 31.7
COL.COLO4_33651 Corchorus olitorius HOM05D000038 ORTHO05D000423 2.7e-07 58.9 98 35.7
Duzib084G1231 Durio zibethinus HOM05D000038 ORTHO05D000423 2.7e-07 58.9 98 31.6
Nn3g21100 Nelumbo nucifera HOM05D000038 ORTHO05D000423 2.7e-07 58.9 91 33.0
Zm00001eb338170 Zea mays HOM05D000038 ORTHO05D000423 2.7e-07 58.9 90 30.0
Dinv01652 Davidia involucrata HOM05D000038 ORTHO05D000423 3.5e-07 58.5 59 40.7
Duzib084G1088 Durio zibethinus HOM05D000038 ORTHO05D000423 3.5e-07 58.5 95 32.6
Eucgr.K02564 Eucalyptus grandis HOM05D000038 ORTHO05D000423 3.5e-07 58.5 110 33.6
Manes.02G087600 Manihot esculenta HOM05D000038 ORTHO05D000423 3.5e-07 58.5 105 34.3
Rhsim06G0125300 Rhododendron simsii HOM05D000038 ORTHO05D000423 3.5e-07 58.5 86 33.7
Dinv11420 Davidia involucrata HOM05D007975 ORTHO05D000423 4.6e-07 58.2 95 29.5
Dinv18376 Davidia involucrata HOM05D000038 ORTHO05D000423 4.6e-07 58.2 88 35.2
PGR142G1212 Punica granatum HOM05D000038 ORTHO05D000423 4.6e-07 58.2 100 30.0
Thecc.01G155900 Theobroma cacao HOM05D000038 ORTHO05D000423 4.6e-07 58.2 101 34.7
Eucgr.K01188 Eucalyptus grandis HOM05D000038 ORTHO05D000423 7.8e-07 57.4 99 34.3
Lj1C628G0 Lonicera japonica HOM05D000038 ORTHO05D000423 7.8e-07 57.4 106 30.2
PGSC0003DMG400017282 Solanum tuberosum HOM05D000038 ORTHO05D000423 7.8e-07 57.4 95 30.5
Actinidia24394 Actinidia chinensis HOM05D001422 ORTHO05D000423 1.0e-06 57.0 91 31.9
Nitab4.5_0000883g0020 Nicotiana tabacum HOM05D000038 ORTHO05D000423 1.0e-06 57.0 91 34.1
Os04g0303100 Oryza sativa ssp. japonica HOM05D000038 ORTHO05D000423 1.0e-06 57.0 107 29.0
HPP92_005193 Vanilla planifolia HOM05D000038 ORTHO05D000423 1.0e-06 57.0 98 31.6
Os01g0958200 Oryza sativa ssp. japonica HOM05D000038 ORTHO05D000423 1.3e-06 56.6 85 37.6
PGSC0003DMG400046324 Solanum tuberosum HOM05D000038 ORTHO05D000423 1.3e-06 56.6 97 29.9
Aqoxy4G02062 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 1.7e-06 56.2 67 44.8
Cc05_g08950 Coffea canephora HOM05D000038 ORTHO05D000423 1.7e-06 56.2 95 32.6
Hma1.2p1_0178F.1_g078370 Hydrangea macrophylla HOM05D000038 ORTHO05D000423 1.7e-06 56.2 102 32.4
Manes.17G060100 Manihot esculenta HOM05D000038 ORTHO05D000423 1.7e-06 56.2 103 33.0
Potri.004G061900 Populus trichocarpa HOM05D000038 ORTHO05D000423 2.3e-06 55.8 59 44.1
Rhsim04G0076100 Rhododendron simsii HOM05D000038 ORTHO05D000423 2.3e-06 55.8 78 33.3
Rhsim04G0076200 Rhododendron simsii HOM05D000038 ORTHO05D000423 2.3e-06 55.8 77 32.5
RhsimUnG0190100 Rhododendron simsii HOM05D000038 ORTHO05D000423 2.3e-06 55.8 77 31.2
Cc10_g10640 Coffea canephora HOM05D000038 ORTHO05D000423 3.0e-06 55.5 91 31.9
QL08p042675 Quercus lobata HOM05D000038 ORTHO05D000423 3.0e-06 55.5 80 37.5
Zm00001eb362630 Zea mays HOM05D000038 ORTHO05D000423 3.0e-06 55.5 90 35.6
CAN.G803.29 Capsicum annuum HOM05D000038 ORTHO05D000423 3.9e-06 55.1 94 31.9
COL.COLO4_17504 Corchorus olitorius HOM05D000038 ORTHO05D000423 3.9e-06 55.1 86 30.2
Eucgr.K01176 Eucalyptus grandis HOM05D000038 ORTHO05D000423 3.9e-06 55.1 97 30.9
QL93p0205_0049 Quercus lobata HOM05D000038 ORTHO05D000423 3.9e-06 55.1 90 33.3
Ah.03g144100 Amaranthus hybridus HOM05D000038 ORTHO05D000423 5.1e-06 54.7 105 35.2
Cc02_g27490 Coffea canephora HOM05D000038 ORTHO05D000423 5.1e-06 54.7 105 31.4
Cc05_g08960 Coffea canephora HOM05D000038 ORTHO05D000423 5.1e-06 54.7 102 33.3
ECA233G3003 Erigeron canadensis HOM05D000038 ORTHO05D000423 5.1e-06 54.7 109 33.0
Aqoxy4G00242 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 6.6e-06 54.3 101 29.7


User provided reference genes

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