Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06523 Sequoiadendron giganteum HOM05D000457 ORTHO05D030135 7.3e-43 176.8 88 100.0
SEGI_27470 Sequoiadendron giganteum HOM05D000457 ORTHO05D030135 7.3e-43 176.8 88 100.0
Pp3c2_24150 Physcomitrium patens HOM05D000457 ORTHO05D030135 9.0e-17 90.1 64 65.6
Mapoly0037s0145 Marchantia polymorpha HOM05D000457 ORTHO05D030135 2.0e-16 89.0 63 71.4
CBR_g2852 Chara braunii HOM05D000457 ORTHO05D003394 1.1e-14 83.2 64 54.7
AagrBONN_evm.TU.Sc2ySwM_228.3118 Anthoceros agrestis HOM05D000457 ORTHO05D003394 9.4e-14 80.1 64 62.5
AUR62021135 Chenopodium quinoa HOM05D000457 ORTHO05D003394 1.2e-08 63.2 66 47.0
Ah.07g206660 Amaranthus hybridus HOM05D000457 ORTHO05D003394 2.6e-08 62.0 66 48.5
ATR0661G550 Amborella trichopoda HOM05D000457 ORTHO05D003394 7.7e-08 60.5 65 44.6
Ciclev10004463m.g Citrus clementina HOM05D000457 ORTHO05D003394 2.9e-07 58.5 60 50.0
Medtr6g048050 Medicago truncatula HOM05D000457 ORTHO05D003394 2.9e-07 58.5 62 46.8
PRCOL_00000681 Prasinoderma coloniale HOM05D000457 ORTHO05D003394 2.9e-07 58.5 53 52.8
Eucgr.A02749 Eucalyptus grandis HOM05D000457 ORTHO05D000560 3.8e-07 58.2 70 41.4
GSVIVG01028873001 Vitis vinifera HOM05D000457 ORTHO05D000560 3.8e-07 58.2 65 44.6
COL.COLO4_28012 Corchorus olitorius HOM05D000457 ORTHO05D003394 5.0e-07 57.8 57 50.9
Gohir.D11G010900 Gossypium hirsutum HOM05D000457 ORTHO05D003394 5.0e-07 57.8 57 50.9
Gorai.007G012400 Gossypium raimondii HOM05D000457 ORTHO05D003394 5.0e-07 57.8 57 50.9
MD01G1207300 Malus domestica HOM05D000457 ORTHO05D003394 5.0e-07 57.8 65 44.6
Manes.06G151700 Manihot esculenta HOM05D000457 ORTHO05D003394 5.0e-07 57.8 65 46.2
Psat1g092760 Pisum sativum HOM05D000457 ORTHO05D003394 5.0e-07 57.8 62 46.8
Cpa.g.sc107.100 Carica papaya HOM05D000457 ORTHO05D003394 6.5e-07 57.4 57 50.9
Potri.017G142841 Populus trichocarpa HOM05D000457 ORTHO05D003394 6.5e-07 57.4 65 43.1
PRCOL_00003771 Prasinoderma coloniale HOM05D000457 ORTHO05D003394 6.5e-07 57.4 70 40.0
PGR042G2678 Punica granatum HOM05D000457 ORTHO05D003394 6.5e-07 57.4 58 53.4
TPR.G33507 Trifolium pratense HOM05D000457 ORTHO05D003394 6.5e-07 57.4 62 46.8
vmacro06636 Vaccinium macrocarpon HOM05D000457 ORTHO05D003394 6.5e-07 57.4 57 50.9
Ca_25423_v3 Cicer arietinum L. HOM05D000457 ORTHO05D003394 8.5e-07 57.0 62 46.8
Nitab4.5_0000921g0050 Nicotiana tabacum HOM05D000457 ORTHO05D003394 8.5e-07 57.0 57 47.4
Solyc03g060510.4 Solanum lycopersicum HOM05D000457 ORTHO05D003394 8.5e-07 57.0 57 49.1
THA.LOC104798698 Tarenaya hassleriana HOM05D000457 ORTHO05D003394 8.5e-07 57.0 70 41.4
DCAR_010661 Daucus carota HOM05D000457 ORTHO05D003394 1.1e-06 56.6 60 46.7
Prupe.2G299900 Prunus persica HOM05D000457 ORTHO05D000560 1.1e-06 56.6 65 43.1
Sed0024505 Sechium edule HOM05D000457 ORTHO05D003394 1.1e-06 56.6 62 45.2
Sopen03g014480 Solanum pennellii HOM05D000457 ORTHO05D003394 1.1e-06 56.6 57 49.1
EL10Ac3g05435 Beta vulgaris HOM05D000457 ORTHO05D003394 1.4e-06 56.2 67 44.8
ClCG01G000960 Citrullus lanatus HOM05D000457 ORTHO05D003394 1.4e-06 56.2 62 45.2
ECA238G2531 Erigeron canadensis HOM05D000457 ORTHO05D000560 1.4e-06 56.2 62 46.8
Peaxi162Scf00023g00927 Petunia axillaris HOM05D000457 ORTHO05D003394 1.4e-06 56.2 57 47.4
Atru.chr1.368 Acer truncatum HOM05D000457 ORTHO05D003394 1.9e-06 55.8 57 49.1
Atru.chr1.384 Acer truncatum HOM05D000457 ORTHO05D003394 1.9e-06 55.8 57 49.1
Atru.ctg97_1.11 Acer truncatum HOM05D000457 ORTHO05D003394 1.9e-06 55.8 57 49.1
AT5G24000 Arabidopsis thaliana HOM05D000457 ORTHO05D003394 1.9e-06 55.8 62 43.5
CsaV3_5G001100 Cucumis sativus L. HOM05D000457 ORTHO05D003394 1.9e-06 55.8 65 41.5
HanXRQChr14g0462491 Helianthus annuus HOM05D000457 ORTHO05D003394 1.9e-06 55.8 70 42.9
Lalb_Chr01g0009471 Lupinus albus HOM05D000457 ORTHO05D003394 1.9e-06 55.8 57 49.1
Nitab4.5_0000011g0380 Nicotiana tabacum HOM05D000457 ORTHO05D003394 1.9e-06 55.8 57 47.4
Rhsim03G0190200 Rhododendron simsii HOM05D000457 ORTHO05D003394 1.9e-06 55.8 57 49.1
Sp2g23310 Schrenkiella parvula HOM05D000457 ORTHO05D003394 1.9e-06 55.8 62 43.5
Hund11724 Selenicereus undatus HOM05D000457 ORTHO05D003394 1.9e-06 55.8 60 45.0
AL6G35320 Arabidopsis lyrata HOM05D000457 ORTHO05D003394 2.5e-06 55.5 62 41.9
BcaNung01199 Brassica carinata HOM05D000457 ORTHO05D003394 2.5e-06 55.5 62 41.9
CANSAT21G2397 Cannabis sativa HOM05D000457 ORTHO05D003394 2.5e-06 55.5 57 47.4
CARHR189570 Cardamine hirsuta HOM05D000457 ORTHO05D003394 2.5e-06 55.5 62 43.5
Lsat_1_v5_gn_2_131201 Lactuca sativa HOM05D000457 ORTHO05D003394 2.5e-06 55.5 56 51.8
RcHm_v2.0_Chr1g0378181 Rosa chinensis HOM05D000457 ORTHO05D003394 2.5e-06 55.5 57 47.4
A06p34780 Brassica napus HOM05D000457 ORTHO05D003394 3.2e-06 55.1 62 41.9
BraA06t26405Z Brassica rapa HOM05D000457 ORTHO05D003394 3.2e-06 55.1 62 41.9
Carub.0006s2172 Capsella rubella HOM05D000457 ORTHO05D003394 3.2e-06 55.1 62 43.5
TWI39G1167 Tripterygium wilfordii HOM05D000457 ORTHO05D003394 3.2e-06 55.1 57 47.4
BcaNung01831 Brassica carinata HOM05D000457 ORTHO05D003394 4.2e-06 54.7 62 41.9
C07p43720 Brassica napus HOM05D000457 ORTHO05D003394 4.2e-06 54.7 62 41.9
BolC7t44902H Brassica oleracea HOM05D000457 ORTHO05D003394 4.2e-06 54.7 62 41.9
Aa31sc89G70 Aethionema arabicum HOM05D000457 ORTHO05D003394 5.5e-06 54.3 62 41.9
Os06g0107100 Oryza sativa ssp. japonica HOM05D000457 ORTHO05D003394 5.5e-06 54.3 57 47.4
Aqoxy5G04086 Aquilegia oxysepala HOM05D000457 ORTHO05D003394 7.2e-06 53.9 54 46.3
MSTRG.8717 Avicennia marina HOM05D000457 ORTHO05D003394 7.2e-06 53.9 65 43.1
FvH4_7g30150 Fragaria vesca HOM05D000457 ORTHO05D003394 7.2e-06 53.9 57 45.6
FAN06G0501 Fragaria x ananassa HOM05D000457 ORTHO05D000560 7.2e-06 53.9 57 45.6
FAN06G1968 Fragaria x ananassa HOM05D000457 ORTHO05D000560 7.2e-06 53.9 57 45.6
Solyc07g007970.3 Solanum lycopersicum HOM05D000457 ORTHO05D003394 7.2e-06 53.9 57 45.6
Sopen07g003850 Solanum pennellii HOM05D000457 ORTHO05D003394 7.2e-06 53.9 57 45.6
CAN.G672.11 Capsicum annuum HOM05D000457 ORTHO05D003394 9.4e-06 53.5 57 43.9
Cc02_g02460 Coffea canephora HOM05D000457 ORTHO05D003394 9.4e-06 53.5 60 45.0
Lj2g0014145 Lotus japonicus HOM05D000457 ORTHO05D003394 9.4e-06 53.5 57 43.9
PSO339G5015 Papaver somniferum HOM05D000457 ORTHO05D003394 9.4e-06 53.5 62 43.5
Peaxi162Scf00023g00825 Petunia axillaris HOM05D000457 ORTHO05D003394 9.4e-06 53.5 60 43.3
PGSC0003DMG400030893 Solanum tuberosum HOM05D000457 ORTHO05D003394 9.4e-06 53.5 57 45.6
unitig_46.g18803 Utricularia gibba HOM05D000457 ORTHO05D003394 9.4e-06 53.5 70 38.6


User provided reference genes

Program Settings