Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06354 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 6.5e-42 174.1 85 100.0
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 4.0e-23 111.7 69 76.8
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 5.7e-22 107.8 69 72.5
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 1.3e-21 106.7 69 72.5
FvH4_6g24820 Fragaria vesca HOM05D005255 ORTHO05D006276 1.3e-21 106.7 69 72.5
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 1.7e-21 106.3 69 73.9
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 2.2e-21 105.9 69 73.9
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 2.8e-21 105.5 69 72.5
FAN14G1086 Fragaria x ananassa HOM05D005255 ORTHO05D006276 2.8e-21 105.5 69 71.0
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 4.8e-21 104.8 69 72.5
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 6.3e-21 104.4 69 69.6
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 6.3e-21 104.4 69 72.5
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 1.1e-20 103.6 69 69.6
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 1.1e-20 103.6 69 69.6
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 1.4e-20 103.2 69 71.0
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 1.4e-20 103.2 69 69.6
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 1.8e-20 102.8 69 71.0
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 2.4e-20 102.4 69 69.6
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 3.1e-20 102.1 69 71.0
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 4.1e-20 101.7 69 71.0
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 4.1e-20 101.7 69 69.6
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 4.1e-20 101.7 69 69.6
Sc13g0001470 Simmondsia chinensis HOM05D005255 ORTHO05D006276 4.1e-20 101.7 69 68.1
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 5.3e-20 101.3 69 69.6
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 5.3e-20 101.3 69 69.6
Ca_08424_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 7.0e-20 100.9 72 68.1
CsaV3_4G021950 Cucumis sativus L. HOM05D005255 ORTHO05D006276 7.0e-20 100.9 69 69.6
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 9.1e-20 100.5 69 65.2
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 9.1e-20 100.5 69 69.6
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 1.2e-19 100.1 69 68.1
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 1.2e-19 100.1 69 68.1
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 1.2e-19 100.1 69 68.1
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 2.0e-19 99.4 69 63.8
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 2.7e-19 99.0 69 68.1
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 3.5e-19 98.6 69 66.7
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 3.5e-19 98.6 69 68.1
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 3.5e-19 98.6 69 68.1
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 3.5e-19 98.6 69 66.7
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 4.5e-19 98.2 69 68.1
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 4.5e-19 98.2 69 68.1
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 4.5e-19 98.2 74 66.2
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 5.9e-19 97.8 69 65.2
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 5.9e-19 97.8 69 66.7
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 5.9e-19 97.8 69 69.6
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 5.9e-19 97.8 69 69.6
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 7.7e-19 97.4 69 62.3
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 7.7e-19 97.4 69 63.8
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 1.0e-18 97.1 69 68.1
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 1.3e-18 96.7 69 68.1
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 1.3e-18 96.7 69 66.7
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 1.7e-18 96.3 69 66.7
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 1.7e-18 96.3 69 66.7
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 1.7e-18 96.3 69 63.8
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 2.2e-18 95.9 69 65.2
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 2.2e-18 95.9 69 65.2
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 2.2e-18 95.9 69 65.2
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 2.2e-18 95.9 69 68.1
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 2.9e-18 95.5 69 65.2
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 2.9e-18 95.5 67 67.2
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 2.9e-18 95.5 69 65.2
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 3.8e-18 95.1 69 66.7
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 5.0e-18 94.7 69 63.8
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 5.0e-18 94.7 80 60.0
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 5.0e-18 94.7 69 65.2
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 6.5e-18 94.4 61 68.9
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 6.5e-18 94.4 69 63.8
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 6.5e-18 94.4 69 63.8
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 6.5e-18 94.4 69 63.8
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 6.5e-18 94.4 69 65.2
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 8.5e-18 94.0 71 70.4
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 8.5e-18 94.0 69 65.2
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 1.1e-17 93.6 69 63.8
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 1.1e-17 93.6 69 65.2
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 1.1e-17 93.6 69 63.8
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 1.5e-17 93.2 69 63.8
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 2.5e-17 92.4 69 62.3
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 3.2e-17 92.0 69 65.2
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 5.5e-17 91.3 69 62.3
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 7.2e-17 90.9 69 63.8
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 1.2e-16 90.1 69 60.9
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 1.2e-16 90.1 69 60.9
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 3.6e-16 88.6 69 58.0
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 6.1e-16 87.8 69 59.4
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 6.1e-16 87.8 69 60.9
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 6.1e-16 87.8 69 60.9
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 6.1e-16 87.8 69 60.9
Pp3c4_1630 Physcomitrium patens HOM05D005255 ORTHO05D006276 8.0e-16 87.4 71 57.7
Pp3c4_1631 Physcomitrium patens HOM05D005255 ORTHO05D006276 8.0e-16 87.4 71 57.7
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 1.4e-15 86.7 69 58.0
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 5.2e-15 84.7 74 56.8
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 5.2e-15 84.7 67 64.2
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 8.8e-15 84.0 70 58.6
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 1.5e-14 83.2 67 59.7
Pp3c8_2040 Physcomitrium patens HOM05D005255 ORTHO05D006276 2.0e-14 82.8 71 57.7
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 3.4e-14 82.0 89 52.8
FAN02G3622 Fragaria x ananassa HOM05D005255 ORTHO05D006276 5.4e-12 74.7 49 69.4
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 2.9e-10 68.9 130 35.4
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 3.8e-10 68.6 69 52.2
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 4.0e-07 58.5 48 58.3
PGSC0003DMG400012726 Solanum tuberosum HOM05D005255 ORTHO05D006276 1.2e-06 57.0 57 49.1
RcHm_v2.0_Chr1g0374991 Rosa chinensis HOM05D005255 ORTHO05D006276 2.0e-06 56.2 44 65.9


User provided reference genes

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