Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06196 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 2.5e-42 175.3 105 100.0
SEGI_13117 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 2.5e-42 175.3 105 100.0
Ciclev10011207m.g Citrus clementina HOM05D003167 ORTHO05D003929 2.2e-30 135.6 83 80.7
Hund04098 Selenicereus undatus HOM05D003167 ORTHO05D003929 6.5e-30 134.0 83 79.5
unitig_578.g16659 Utricularia gibba HOM05D003167 ORTHO05D003929 8.5e-30 133.7 83 79.5
Cc00_g14960 Coffea canephora HOM05D003167 ORTHO05D003929 1.1e-29 133.3 83 77.1
Lj3C1008T14 Lonicera japonica HOM05D003167 ORTHO05D003929 2.5e-29 132.1 82 79.3
Medtr1g061860 Medicago truncatula HOM05D003167 ORTHO05D003929 3.2e-29 131.7 83 77.1
Cc00_g14970 Coffea canephora HOM05D003167 ORTHO05D003929 7.2e-29 130.6 81 77.8
ClCG10G019590 Citrullus lanatus HOM05D003167 ORTHO05D003929 9.4e-29 130.2 83 78.3
COL.COLO4_22264 Corchorus olitorius HOM05D003167 ORTHO05D003929 9.4e-29 130.2 83 77.1
MELO3C009413.2 Cucumis melo HOM05D003167 ORTHO05D003929 9.4e-29 130.2 83 78.3
EL10Ac7g16722 Beta vulgaris HOM05D003167 ORTHO05D003929 1.2e-28 129.8 83 73.5
THA.LOC104816364 Tarenaya hassleriana HOM05D003167 ORTHO05D003929 1.2e-28 129.8 83 75.9
Dinv35839 Davidia involucrata HOM05D003167 ORTHO05D003929 1.6e-28 129.4 83 74.7
GSVIVG01033725001 Vitis vinifera HOM05D003167 ORTHO05D003929 1.6e-28 129.4 83 77.1
TAR623G0013 Trochodendron aralioides HOM05D003167 ORTHO05D003929 2.1e-28 129.0 81 79.0
Ah.15g091330 Amaranthus hybridus HOM05D003167 ORTHO05D003929 2.7e-28 128.6 82 75.6
CSS0014862 Camellia sinensis var. sinensis HOM05D003167 ORTHO05D003929 2.7e-28 128.6 83 73.5
CSS0043785 Camellia sinensis var. sinensis HOM05D003167 ORTHO05D003929 2.7e-28 128.6 83 73.5
DCAR_020795 Daucus carota HOM05D003167 ORTHO05D003929 2.7e-28 128.6 82 78.0
Duzib093G1992 Durio zibethinus HOM05D003167 ORTHO05D003929 2.7e-28 128.6 82 78.0
Gohir.A04G067800 Gossypium hirsutum HOM05D003167 ORTHO05D003929 2.7e-28 128.6 83 75.9
Thecc.05G076300 Theobroma cacao HOM05D003167 ORTHO05D003929 2.7e-28 128.6 100 66.0
Atru.chr8.1695 Acer truncatum HOM05D003167 ORTHO05D003929 4.7e-28 127.9 83 77.1
Migut.G00710 Erythranthe guttata HOM05D003167 ORTHO05D003929 4.7e-28 127.9 82 76.8
Gohir.D04G106400 Gossypium hirsutum HOM05D003167 ORTHO05D003929 4.7e-28 127.9 83 75.9
Gorai.009G410400 Gossypium raimondii HOM05D003167 ORTHO05D003929 4.7e-28 127.9 83 75.9
Manes.08G017200 Manihot esculenta HOM05D003167 ORTHO05D003929 4.7e-28 127.9 83 75.9
Cpa.g.sc5.120 Carica papaya HOM05D003167 ORTHO05D003929 6.1e-28 127.5 83 77.1
arahy.Tifrunner.gnm1.ann1.P92TZX Arachis hypogaea HOM05D003167 ORTHO05D003929 8.0e-28 127.1 83 75.9
arahy.Tifrunner.gnm1.ann1.WY8M22 Arachis hypogaea HOM05D003167 ORTHO05D003929 8.0e-28 127.1 83 75.9
Actinidia26630 Actinidia chinensis HOM05D003167 ORTHO05D003929 1.0e-27 126.7 83 73.5
Lalb_Chr21g0315291 Lupinus albus HOM05D003167 ORTHO05D003929 1.0e-27 126.7 83 72.3
MSTRG.21603 Avicennia marina HOM05D003167 ORTHO05D003929 1.4e-27 126.3 81 75.3
Sed0027110 Sechium edule HOM05D003167 ORTHO05D003929 1.4e-27 126.3 83 75.9
Ca_08942_v3 Cicer arietinum L. HOM05D003167 ORTHO05D003929 1.8e-27 125.9 83 73.5
FvH4_6g17312 Fragaria vesca HOM05D003167 ORTHO05D003929 1.8e-27 125.9 83 74.7
FAN02G2003 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.8e-27 125.9 83 74.7
FAN05G3544 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.8e-27 125.9 83 74.7
FAN05G3981 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.8e-27 125.9 83 74.7
FAN14G2907 Fragaria x ananassa HOM05D003167 ORTHO05D003929 1.8e-27 125.9 83 74.7
SalBow8G1467 Salvia bowleyana HOM05D003167 ORTHO05D003929 1.8e-27 125.9 84 77.4
SalBow8G3947 Salvia bowleyana HOM05D003167 ORTHO05D003929 1.8e-27 125.9 84 77.4
Solyc10g085410.3 Solanum lycopersicum HOM05D003167 ORTHO05D003929 2.3e-27 125.6 81 76.5
Aqoxy1G01021 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 3.0e-27 125.2 83 74.7
Cfa016494 Carpinus fangiana HOM05D003167 ORTHO05D003929 3.0e-27 125.2 83 73.5
CiPaw.10G002600 Carya illinoinensis HOM05D003167 ORTHO05D003929 3.0e-27 125.2 83 75.9
Lsat_1_v5_gn_2_23140 Lactuca sativa HOM05D003167 ORTHO05D003929 3.0e-27 125.2 83 73.5
Nitab4.5_0002027g0020 Nicotiana tabacum HOM05D003167 ORTHO05D003929 5.2e-27 124.4 82 75.6
PGSC0003DMG400040194 Solanum tuberosum HOM05D003167 ORTHO05D003929 5.2e-27 124.4 80 76.2
Lj1g0005916 Lotus japonicus HOM05D003167 ORTHO05D003929 6.7e-27 124.0 83 72.3
Sabra06G0093300 Salix brachista HOM05D003167 ORTHO05D003929 6.7e-27 124.0 81 76.5
Sopen10g034860 Solanum pennellii HOM05D003167 ORTHO05D003929 6.7e-27 124.0 80 76.2
Haze_19497 Corylus avellana HOM05D003167 ORTHO05D003929 8.8e-27 123.6 83 72.3
Aqoxy1G01022 Aquilegia oxysepala HOM05D003167 ORTHO05D003929 1.1e-26 123.2 83 72.3
CDE04G1328 Ceratophyllum demersum HOM05D003167 ORTHO05D003929 1.1e-26 123.2 83 71.1
Peaxi162Scf01089g10011 Petunia axillaris HOM05D003167 ORTHO05D003929 1.5e-26 122.9 83 71.1
RcHm_v2.0_Chr3g0471451 Rosa chinensis HOM05D003167 ORTHO05D003929 1.5e-26 122.9 83 72.3
VMungo0720G2588 Vigna mungo HOM05D003167 ORTHO05D003929 1.5e-26 122.9 83 73.5
AUR62040188 Chenopodium quinoa HOM05D003167 ORTHO05D003929 2.0e-26 122.5 79 74.7
AUR62042696 Chenopodium quinoa HOM05D003167 ORTHO05D003929 2.0e-26 122.5 79 74.7
Medtr7g102700 Medicago truncatula HOM05D003167 ORTHO05D003929 2.6e-26 122.1 83 72.3
TAR636G1269 Trochodendron aralioides HOM05D003167 ORTHO05D003929 2.6e-26 122.1 83 72.3
CsaV3_3G036590 Cucumis sativus L. HOM05D003167 ORTHO05D003929 3.3e-26 121.7 76 80.3
Sc01g0003900 Simmondsia chinensis HOM05D003167 ORTHO05D003929 3.3e-26 121.7 84 72.6
Phvul.001G184000 Phaseolus vulgaris HOM05D003167 ORTHO05D003929 4.4e-26 121.3 83 73.5
TPR.G31678 Trifolium pratense HOM05D003167 ORTHO05D003929 5.7e-26 120.9 83 71.1
ATR0724G050 Amborella trichopoda HOM05D003167 ORTHO05D003929 7.5e-26 120.6 90 72.2
Glyma.03G188600 Glycine max HOM05D003167 ORTHO05D003929 7.5e-26 120.6 83 71.1
Aa31LG1G9100 Aethionema arabicum HOM05D003167 ORTHO05D003929 9.7e-26 120.2 81 71.6
Glyma.19G188800 Glycine max HOM05D003167 ORTHO05D003929 9.7e-26 120.2 81 74.1
TPR.G27088 Trifolium pratense HOM05D003167 ORTHO05D003929 9.7e-26 120.2 77 77.9
CAN.G738.3 Capsicum annuum HOM05D003167 ORTHO05D003929 1.7e-25 119.4 72 80.6
Peaxi162Scf00732g00028 Petunia axillaris HOM05D003167 ORTHO05D003929 1.7e-25 119.4 83 72.3
AagrBONN_evm.TU.Sc2ySwM_344.2239 Anthoceros agrestis HOM05D003167 ORTHO05D003929 2.2e-25 119.0 81 72.8
COL.COLO4_17620 Corchorus olitorius HOM05D003167 ORTHO05D003929 2.2e-25 119.0 85 71.8
AL1G13510 Arabidopsis lyrata HOM05D003167 ORTHO05D003929 2.8e-25 118.6 81 69.1
AT1G03910 Arabidopsis thaliana HOM05D003167 ORTHO05D003929 2.8e-25 118.6 83 68.7
VMungo1383G0302 Vigna mungo HOM05D003167 ORTHO05D003929 2.8e-25 118.6 81 72.8
SGA_v2.0_scaffold312G48279 Striga asiatica HOM05D003167 ORTHO05D003929 4.8e-25 117.9 79 73.4
CANSAT80G1311 Cannabis sativa HOM05D003167 ORTHO05D003929 6.3e-25 117.5 83 69.9
Rhsim03G0085500 Rhododendron simsii HOM05D003167 ORTHO05D003929 6.3e-25 117.5 84 71.4
Lalb_Chr25g0288761 Lupinus albus HOM05D003167 ORTHO05D003929 8.2e-25 117.1 82 69.5
PGR142G4079 Punica granatum HOM05D003167 ORTHO05D003929 1.1e-24 116.7 83 67.5
Thecc.06G013600 Theobroma cacao HOM05D003167 ORTHO05D003929 1.1e-24 116.7 83 68.7
Pp3c27_420 Physcomitrium patens HOM05D003167 ORTHO05D003929 1.8e-24 115.9 82 69.5
C05p02250 Brassica napus HOM05D003167 ORTHO05D003929 2.4e-24 115.5 80 70.0
CARHR003240 Cardamine hirsuta HOM05D003167 ORTHO05D003929 2.4e-24 115.5 80 68.8
Carub.0001s0306 Capsella rubella HOM05D003167 ORTHO05D003929 3.1e-24 115.2 83 66.3
Lj8P306T56 Lonicera japonica HOM05D003167 ORTHO05D003929 3.1e-24 115.2 82 69.5
SMO169G0108 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 3.1e-24 115.2 84 71.4
vmacro07353 Vaccinium macrocarpon HOM05D003167 ORTHO05D003929 3.1e-24 115.2 83 67.5
HPP92_017793 Vanilla planifolia HOM05D003167 ORTHO05D003929 3.1e-24 115.2 83 69.9
Thhalv10006994m.g Eutrema salsugineum HOM05D003167 ORTHO05D003929 7.0e-24 114.0 76 73.7
PSO339G0841 Papaver somniferum HOM05D003167 ORTHO05D003929 9.1e-24 113.6 83 66.3
Thecc.08G192100 Theobroma cacao HOM05D003167 ORTHO05D003929 9.1e-24 113.6 91 65.9
A10p02430 Brassica napus HOM05D003167 ORTHO05D003929 1.2e-23 113.2 76 72.4
ECA238G2918 Erigeron canadensis HOM05D003167 ORTHO05D003929 1.2e-23 113.2 82 67.1
C08p52570 Brassica napus HOM05D003167 ORTHO05D003929 1.6e-23 112.8 76 72.4
Mapoly0001s0156 Marchantia polymorpha HOM05D003167 ORTHO05D003929 1.6e-23 112.8 83 65.1
SHI27742 Sapria himalayana HOM05D003167 ORTHO05D003929 1.6e-23 112.8 89 70.8
Zm00001eb061170 Zea mays HOM05D003167 ORTHO05D003929 2.0e-23 112.5 83 69.9
A09p68130 Brassica napus HOM05D003167 ORTHO05D003929 2.7e-23 112.1 76 71.1
BolC5t29003H Brassica oleracea HOM05D003167 ORTHO05D003929 2.7e-23 112.1 76 71.1
BraA09t42148Z Brassica rapa HOM05D003167 ORTHO05D003929 2.7e-23 112.1 76 71.1
Sp1g02770 Schrenkiella parvula HOM05D003167 ORTHO05D003929 4.5e-23 111.3 76 71.1
BolC8t52784H Brassica oleracea HOM05D003167 ORTHO05D003929 5.9e-23 110.9 76 71.1
BcaC05g24486 Brassica carinata HOM05D003167 ORTHO05D003929 7.7e-23 110.5 76 69.7
Hma1.2p1_0564F.1_g179130 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 1.7e-22 109.4 83 68.7
Eucgr.K02416 Eucalyptus grandis HOM05D003167 ORTHO05D003929 2.9e-22 108.6 81 67.9
Psat6g078080 Pisum sativum HOM05D003167 ORTHO05D003929 1.1e-21 106.7 61 82.0
SMO364G0524 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 1.1e-21 106.7 81 69.1
PSO210G0575 Papaver somniferum HOM05D003167 ORTHO05D003929 2.5e-21 105.5 83 62.7
ECA232G4802 Erigeron canadensis HOM05D003167 ORTHO05D003929 3.2e-21 105.1 82 63.4
Potri.006G118700 Populus trichocarpa HOM05D003167 ORTHO05D003929 9.4e-21 103.6 60 81.7
MD14G1096200 Malus domestica HOM05D003167 ORTHO05D003929 1.6e-20 102.8 83 61.4
Os03g0800100 Oryza sativa ssp. japonica HOM05D003167 ORTHO05D003929 1.6e-20 102.8 82 64.6
HanXRQChr11g0325191 Helianthus annuus HOM05D003167 ORTHO05D003929 2.7e-20 102.1 81 63.0
CARHR131270 Cardamine hirsuta HOM05D003167 ORTHO05D003929 3.6e-20 101.7 73 67.1
QL07p041296 Quercus lobata HOM05D003167 ORTHO05D003929 6.1e-20 100.9 83 68.7
Oeu026917.1 Olea europaea HOM05D003167 ORTHO05D003929 3.0e-19 98.6 174 39.1
Atru.chr10.1911 Acer truncatum HOM05D003167 ORTHO05D003929 4.0e-19 98.2 83 65.1
AL4G33010 Arabidopsis lyrata HOM05D003167 ORTHO05D003929 1.2e-18 96.7 81 59.3
Carub.0004s1866 Capsella rubella HOM05D003167 ORTHO05D003929 4.4e-18 94.7 76 63.2
SMO301G0016 Selaginella moellendorffii HOM05D003167 ORTHO05D003929 2.8e-17 92.0 81 64.2
SEGI_26849 Sequoiadendron giganteum HOM05D003167 ORTHO05D003929 4.1e-16 88.2 48 95.8
Prupe.7G122300 Prunus persica HOM05D003167 ORTHO05D003929 7.0e-16 87.4 56 73.2
CBR_g4119 Chara braunii HOM05D003167 ORTHO05D003929 9.1e-16 87.0 72 56.9
Potri.001G242900 Populus trichocarpa HOM05D003167 ORTHO05D003929 2.0e-15 85.9 83 55.4
EL10Ac3g06890 Beta vulgaris HOM05D003167 ORTHO05D003929 5.9e-15 84.3 84 54.8
BcaC07g42222 Brassica carinata HOM05D003167 ORTHO05D003929 1.0e-14 83.6 80 56.2
CARHR131220 Cardamine hirsuta HOM05D003167 ORTHO05D003929 1.3e-14 83.2 60 70.0
CDE07G1466 Ceratophyllum demersum HOM05D003167 ORTHO05D003929 2.7e-12 75.5 51 72.5
PGR083G2067 Punica granatum HOM05D003167 ORTHO05D003929 1.8e-11 72.8 83 48.2
COL.COLO4_36480 Corchorus olitorius HOM05D003167 ORTHO05D003929 1.2e-10 70.1 45 73.3
PRCOL_00002534 Prasinoderma coloniale HOM05D003167 ORTHO05D003929 1.7e-09 66.2 72 44.4
Sp4g05130 Schrenkiella parvula HOM05D003167 ORTHO05D003929 2.8e-09 65.5 65 53.8
Cc07_g17880 Coffea canephora HOM05D003167 ORTHO05D003929 4.9e-09 64.7 78 52.6
Medtr0130s0060 Medicago truncatula HOM05D003167 ORTHO05D003929 4.1e-08 61.6 38 78.9
Hma1.2p1_2596F.1_g325110 Hydrangea macrophylla HOM05D003167 ORTHO05D003929 5.4e-08 61.2 68 51.5
Oeu005667.1 Olea europaea HOM05D003167 ORTHO05D003929 5.4e-08 61.2 37 64.9
AUR62007183 Chenopodium quinoa HOM05D003167 ORTHO05D003929 1.2e-07 60.1 84 42.9


User provided reference genes

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