Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.5e-36 155.6 76 100.0
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 1.2e-20 102.8 76 65.8
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 1.5e-20 102.4 76 64.5
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 2.0e-20 102.1 76 63.2
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 2.0e-20 102.1 76 65.8
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 2.6e-20 101.7 76 65.8
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.6e-20 101.7 76 67.1
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 4.4e-20 100.9 76 63.2
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 4.4e-20 100.9 76 64.5
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 4.4e-20 100.9 76 64.5
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 5.8e-20 100.5 76 63.2
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 5.8e-20 100.5 76 64.5
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 5.8e-20 100.5 76 64.5
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 5.8e-20 100.5 65 70.8
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 7.5e-20 100.1 76 64.5
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 7.5e-20 100.1 76 63.2
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 9.9e-20 99.8 76 60.5
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 9.9e-20 99.8 76 60.5
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.3e-19 99.4 76 60.5
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 1.3e-19 99.4 76 64.5
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 1.7e-19 99.0 76 63.2
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 1.7e-19 99.0 76 63.2
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 1.7e-19 99.0 76 61.8
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 2.2e-19 98.6 76 61.8
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 2.2e-19 98.6 76 60.5
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 2.9e-19 98.2 64 68.8
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 2.9e-19 98.2 76 63.2
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 3.7e-19 97.8 76 61.8
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.7e-19 97.8 76 60.5
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 3.7e-19 97.8 76 60.5
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.7e-19 97.8 76 63.2
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 3.7e-19 97.8 76 60.5
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 4.9e-19 97.4 76 61.8
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 4.9e-19 97.4 76 59.2
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 6.4e-19 97.1 76 63.2
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 6.4e-19 97.1 76 57.9
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 8.3e-19 96.7 76 61.8
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 8.3e-19 96.7 76 60.5
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 8.3e-19 96.7 76 60.5
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 8.3e-19 96.7 76 61.8
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 8.3e-19 96.7 76 61.8
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 8.3e-19 96.7 76 60.5
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 8.3e-19 96.7 76 59.2
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 8.3e-19 96.7 76 57.9
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.1e-18 96.3 76 59.2
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 1.1e-18 96.3 76 60.5
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 1.1e-18 96.3 76 61.8
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.1e-18 96.3 76 57.9
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.1e-18 96.3 76 57.9
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 1.4e-18 95.9 76 59.2
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 1.4e-18 95.9 76 59.2
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.9e-18 95.5 76 60.5
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 1.9e-18 95.5 65 66.2
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 1.9e-18 95.5 76 63.2
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.9e-18 95.5 76 57.9
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 1.9e-18 95.5 76 60.5
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.9e-18 95.5 76 60.5
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.9e-18 95.5 64 67.2
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 2.4e-18 95.1 76 60.5
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 2.4e-18 95.1 76 59.2
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 2.4e-18 95.1 76 60.5
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 2.4e-18 95.1 76 61.8
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 3.2e-18 94.7 76 59.2
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 3.2e-18 94.7 64 62.5
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 4.1e-18 94.4 64 65.6
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 4.1e-18 94.4 76 57.9
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 4.1e-18 94.4 64 68.8
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 4.1e-18 94.4 76 60.5
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 4.1e-18 94.4 76 63.2
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 5.4e-18 94.0 76 60.5
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 5.4e-18 94.0 64 67.2
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 5.4e-18 94.0 64 64.1
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 7.1e-18 93.6 76 57.9
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 7.1e-18 93.6 76 59.2
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 7.1e-18 93.6 76 57.9
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 7.1e-18 93.6 76 59.2
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 7.1e-18 93.6 76 56.6
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 7.1e-18 93.6 76 57.9
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 9.2e-18 93.2 76 59.2
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 9.2e-18 93.2 76 60.5
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 1.2e-17 92.8 76 59.2
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 1.2e-17 92.8 76 59.2
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 1.2e-17 92.8 76 56.6
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 1.6e-17 92.4 76 60.5
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 2.1e-17 92.0 76 60.5
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 2.1e-17 92.0 64 64.1
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 2.7e-17 91.7 77 58.4
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 3.5e-17 91.3 76 57.9
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 3.5e-17 91.3 76 57.9
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 3.5e-17 91.3 76 59.2
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 3.5e-17 91.3 76 55.3
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 7.8e-17 90.1 60 65.0
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 1.3e-16 89.4 76 60.5
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 1.3e-16 89.4 76 57.9
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 1.7e-16 89.0 76 59.2
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 1.7e-16 89.0 76 56.6
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 1.7e-16 89.0 76 56.6
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.3e-16 88.6 76 60.5
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 3.0e-16 88.2 75 52.0
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 3.1e-13 78.2 76 48.7
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 1.2e-12 76.3 76 48.7
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 1.5e-12 75.9 46 69.6


User provided reference genes

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