Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06029 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 3.9e-254 880.9 439 100.0
SEGI_32877 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 9.0e-182 640.6 349 93.1
SEGI_38062 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 5.7e-120 435.3 261 86.2
SEGI_11513 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 3.7e-95 352.8 267 72.3
SEGI_01194 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 5.7e-43 179.5 253 46.6
Pp3c8_2900 Physcomitrium patens HOM05D002759 ORTHO05D003290 2.8e-42 177.2 342 33.3
Mapoly0118s0005 Marchantia polymorpha HOM05D002759 ORTHO05D003290 7.6e-40 169.1 345 35.1
SEGI_03512 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 2.8e-34 150.6 101 77.2
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 3.4e-32 143.7 400 29.0
AagrBONN_evm.TU.Sc2ySwM_117.1581 Anthoceros agrestis HOM05D002759 ORTHO05D003290 1.0e-31 142.1 338 30.5
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 2.5e-30 137.5 348 30.5
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 2.5e-30 137.5 384 28.6
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 1.6e-29 134.8 417 24.9
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 1.6e-29 134.8 398 29.6
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 3.6e-29 133.7 419 27.0
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 1.4e-28 131.7 364 25.5
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 3.0e-28 130.6 366 28.4
Cpa.g.sc148.29 Carica papaya HOM05D002759 ORTHO05D003290 8.8e-28 129.0 343 26.5
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 2.8e-26 124.0 385 27.0
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 2.8e-26 124.0 325 30.2
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 3.7e-26 123.6 340 27.1
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 1.4e-25 121.7 387 26.9
SEGI_28026 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 1.4e-25 121.7 83 78.3
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 3.1e-25 120.6 341 29.9
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 2.2e-23 114.4 387 26.6
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 8.5e-23 112.5 355 26.5
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 1.4e-22 111.7 337 28.2
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 2.5e-22 110.9 401 24.9
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 5.5e-22 109.8 306 27.5
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 5.5e-22 109.8 337 27.9
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 1.2e-21 108.6 343 25.7
SEGI_31868 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 1.2e-21 108.6 78 70.5
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 2.1e-21 107.8 301 27.6
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 2.7e-21 107.5 337 28.5
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 2.7e-21 107.5 289 29.1
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 3.6e-21 107.1 332 26.2
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 4.7e-21 106.7 386 26.2
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 1.4e-20 105.1 332 26.8
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 1.4e-20 105.1 409 24.2
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 1.8e-20 104.8 353 24.6
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 3.0e-20 104.0 348 26.7
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 3.9e-20 103.6 347 27.1
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 3.9e-20 103.6 332 25.6
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 5.1e-20 103.2 372 25.8
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 5.1e-20 103.2 350 27.1
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 6.7e-20 102.8 332 26.2
Zm00001eb193470 Zea mays HOM05D002759 ORTHO05D003290 6.7e-20 102.8 360 24.2
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 1.1e-19 102.1 351 25.4
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.1e-19 102.1 372 25.3
SEGI_01845 Sequoiadendron giganteum HOM05D015553 ORTHO05D015291 1.1e-19 102.1 64 78.1
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 2.0e-19 101.3 378 24.6
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 3.3e-19 100.5 334 26.3
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 5.7e-19 99.8 359 25.6
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 5.7e-19 99.8 350 24.3
Gohir.A01G176550 Gossypium hirsutum HOM05D002759 ORTHO05D003290 7.4e-19 99.4 328 22.0
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 7.4e-19 99.4 356 25.3
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.3e-18 98.6 372 25.3
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.2e-18 97.8 322 25.8
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.4e-17 95.1 318 27.7
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.4e-17 95.1 318 27.7
CBR_g18638 Chara braunii HOM05D002759 ORTHO05D003290 2.4e-17 94.4 261 28.7
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 2.4e-17 94.4 358 24.9
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 3.1e-17 94.0 343 26.8
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 3.1e-17 94.0 297 22.6
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 4.1e-17 93.6 332 25.0
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 5.3e-17 93.2 395 23.5
Gohir.D01G167366 Gossypium hirsutum HOM05D002759 ORTHO05D003290 5.3e-17 93.2 328 21.3
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 1.2e-16 92.0 334 24.3
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 2.0e-16 91.3 375 24.3
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 2.6e-16 90.9 353 25.8
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 3.5e-16 90.5 333 27.6
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 7.7e-16 89.4 303 26.7
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 1.0e-15 89.0 396 23.7
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 1.3e-15 88.6 336 23.2
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 1.7e-15 88.2 317 23.3
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 1.7e-15 88.2 306 26.8
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 3.8e-15 87.0 336 22.9
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 6.5e-15 86.3 332 23.8
SEGI_21914 Sequoiadendron giganteum HOM05D022758 ORTHO05D015291 8.5e-15 85.9 51 78.4
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 2.5e-14 84.3 342 22.2
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 2.5e-14 84.3 342 22.2
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 5.5e-14 83.2 341 22.3
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 5.5e-14 83.2 316 26.3
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 5.5e-14 83.2 298 23.2
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.6e-13 81.6 340 20.9
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 6.1e-13 79.7 341 22.9
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 1.0e-12 79.0 318 24.2
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 1.4e-12 78.6 347 23.1
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 3.0e-12 77.4 334 22.5
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 3.0e-12 77.4 343 22.4
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 4.0e-12 77.0 335 24.8
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 6.7e-12 76.3 336 23.5
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 1.5e-11 75.1 314 25.8
ATR0661G448 Amborella trichopoda HOM05D002759 ORTHO05D015291 3.3e-11 73.9 244 26.2
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 9.7e-11 72.4 341 21.7
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 9.7e-11 72.4 329 23.7
CDE09G0711 Ceratophyllum demersum HOM05D002759 ORTHO05D003290 1.3e-10 72.0 251 25.5
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 1.7e-10 71.6 362 24.0
HPP92_009112 Vanilla planifolia HOM05D002759 ORTHO05D003290 1.7e-10 71.6 149 26.8
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 3.1e-09 67.4 310 25.8
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 3.1e-09 67.4 310 25.8
CsaV3_6G032170 Cucumis sativus L. HOM05D002759 ORTHO05D003290 7.0e-09 66.2 145 31.0
SEGI_27153 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.6e-08 65.1 48 64.6
Actinidia00220 Actinidia chinensis HOM05D002759 ORTHO05D003290 1.0e-07 62.4 94 37.2
SMO356G0583 Selaginella moellendorffii HOM05D002759 ORTHO05D003290 2.9e-07 60.8 107 36.4
FAN18G4196 Fragaria x ananassa HOM05D002759 ORTHO05D003290 5.0e-07 60.1 142 28.2
SEGI_40834 Sequoiadendron giganteum HOM05D000070 ORTHO05D003190 1.1e-06 58.9 31 83.9
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 1.9e-06 58.2 252 24.6
Aqoxy3G00698 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 4.2e-06 57.0 255 24.7
Ah.07g205390 Amaranthus hybridus HOM05D002759 ORTHO05D003290 5.5e-06 56.6 324 20.1
SEGI_12022 Sequoiadendron giganteum HOM05D005122 ORTHO05D006057 7.2e-06 56.2 32 78.1


User provided reference genes

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