Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 7.6e-86 320.5 163 100.0
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 1.1e-36 157.1 102 78.4
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 1.5e-36 156.8 105 76.2
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 4.2e-36 155.2 95 77.9
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 4.2e-36 155.2 95 77.9
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 7.2e-36 154.5 93 79.6
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 7.2e-36 154.5 93 79.6
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 7.2e-36 154.5 93 79.6
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 1.2e-35 153.7 110 70.9
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.6e-35 153.3 101 74.3
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 2.1e-35 152.9 95 78.9
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 2.7e-35 152.5 101 74.3
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 2.7e-35 152.5 116 69.0
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 2.7e-35 152.5 103 74.8
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 3.6e-35 152.1 104 74.0
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 4.7e-35 151.8 95 78.9
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 4.7e-35 151.8 93 77.4
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 4.7e-35 151.8 104 74.0
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 6.1e-35 151.4 106 72.6
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 6.1e-35 151.4 127 65.4
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 8.0e-35 151.0 108 70.4
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 1.0e-34 150.6 98 74.5
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 1.0e-34 150.6 95 76.8
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 1.0e-34 150.6 96 76.0
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 1.8e-34 149.8 95 77.9
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 3.0e-34 149.1 91 80.2
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 3.0e-34 149.1 104 73.1
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 4.0e-34 148.7 98 76.5
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 8.8e-34 147.5 98 74.5
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 8.8e-34 147.5 98 74.5
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 8.8e-34 147.5 99 74.7
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.2e-33 147.1 114 66.7
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 1.2e-33 147.1 163 53.4
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.5e-33 146.7 100 71.0
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 1.5e-33 146.7 96 76.0
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 1.5e-33 146.7 99 73.7
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 1.5e-33 146.7 157 55.4
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 2.6e-33 146.0 99 75.8
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 2.6e-33 146.0 97 74.2
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 2.6e-33 146.0 104 73.1
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 2.6e-33 146.0 103 69.9
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 3.4e-33 145.6 165 51.5
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 3.4e-33 145.6 95 75.8
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 4.4e-33 145.2 102 71.6
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 4.4e-33 145.2 95 74.7
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 4.4e-33 145.2 104 69.2
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 7.5e-33 144.4 95 72.6
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 7.5e-33 144.4 157 53.5
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 9.8e-33 144.1 95 76.8
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 9.8e-33 144.1 162 53.1
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 1.3e-32 143.7 92 76.1
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 1.7e-32 143.3 111 68.5
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 1.7e-32 143.3 104 70.2
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 2.2e-32 142.9 95 73.7
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 2.8e-32 142.5 94 74.5
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 2.8e-32 142.5 162 51.9
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 2.8e-32 142.5 103 67.0
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 4.8e-32 141.7 166 54.2
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 4.8e-32 141.7 108 65.7
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 6.3e-32 141.4 95 74.7
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 1.1e-31 140.6 158 56.3
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 1.4e-31 140.2 88 75.0
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 1.4e-31 140.2 93 73.1
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 1.8e-31 139.8 99 72.7
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 1.8e-31 139.8 161 54.0
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 3.1e-31 139.0 167 53.9
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 4.1e-31 138.7 152 52.0
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 4.1e-31 138.7 152 52.0
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 5.4e-31 138.3 84 81.0
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 9.1e-31 137.5 88 73.9
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 9.1e-31 137.5 92 75.0
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 1.6e-30 136.7 138 57.2
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 1.6e-30 136.7 99 65.7
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 2.0e-30 136.3 94 69.1
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 2.0e-30 136.3 94 69.1
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 2.0e-30 136.3 94 69.1
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 2.0e-30 136.3 94 69.1
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 2.0e-30 136.3 88 72.7
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 2.7e-30 136.0 87 75.9
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 3.5e-30 135.6 88 72.7
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 4.5e-30 135.2 93 69.9
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 4.5e-30 135.2 93 68.8
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 7.7e-30 134.4 106 66.0
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 1.3e-29 133.7 119 57.1
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 2.3e-29 132.9 173 47.4
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 2.3e-29 132.9 90 70.0
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 2.3e-29 132.9 90 70.0
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 2.3e-29 132.9 121 57.0
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 2.3e-29 132.9 93 67.7
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 2.9e-29 132.5 140 53.6
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 6.6e-29 131.3 93 67.7
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 8.6e-29 131.0 93 66.7
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 1.1e-28 130.6 93 66.7
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 1.1e-28 130.6 90 68.9
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 1.1e-28 130.6 96 68.8
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 1.5e-28 130.2 138 52.2
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 1.5e-28 130.2 77 84.4
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 2.5e-28 129.4 161 46.6
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 5.5e-28 128.3 106 66.0
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 2.3e-26 122.9 96 67.7
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 3.0e-26 122.5 145 49.7
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 6.8e-26 121.3 77 79.2
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 1.2e-25 120.6 74 79.7
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 4.4e-25 118.6 89 68.5
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 5.7e-25 118.2 85 68.2
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 1.5e-20 103.6 94 58.5
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 1.9e-20 103.2 83 60.2
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 4.7e-19 98.6 116 44.8
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 7.5e-17 91.3 85 45.9
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 2.9e-16 89.4 102 50.0
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 5.4e-15 85.1 48 85.4
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.2e-14 84.0 156 38.5
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.2e-14 84.0 156 38.5
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 1.2e-14 84.0 48 85.4
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 4.3e-12 75.5 90 50.0
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.2e-09 67.4 63 50.8
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 1.9e-07 60.1 47 57.4
Thhalv10002241m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 1.2e-06 57.4 60 55.0
AT5G17560 Arabidopsis thaliana HOM05D006461 ORTHO05D008199 1.6e-06 57.0 47 53.2
AL3G12680 Arabidopsis lyrata HOM05D000403 ORTHO05D000350 6.0e-06 55.1 50 60.0


User provided reference genes

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