Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05919 Sequoiadendron giganteum HOM05D004490 ORTHO05D005353 3.3e-119 431.8 228 100.0
Gohir.A13G121400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 1.1e-53 214.2 189 61.9
Gohir.D13G125400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 1.4e-53 213.8 189 61.4
Manes.02G191800 Manihot esculenta HOM05D004490 ORTHO05D005353 1.8e-53 213.4 188 59.0
Gorai.013G140400 Gossypium raimondii HOM05D004490 ORTHO05D005353 2.4e-53 213.0 189 60.8
Duzib177G0006 Durio zibethinus HOM05D004490 ORTHO05D005353 1.7e-51 206.8 193 58.0
GSVIVG01034483001 Vitis vinifera HOM05D004490 ORTHO05D005353 2.9e-51 206.1 190 56.3
MSTRG.1522 Avicennia marina HOM05D004490 ORTHO05D005353 8.5e-51 204.5 189 59.3
Cc10_g11460 Coffea canephora HOM05D004490 ORTHO05D005353 1.1e-50 204.1 193 57.0
Ah.05g178090 Amaranthus hybridus HOM05D004490 ORTHO05D005353 1.9e-50 203.4 192 57.8
ClCG09G010540 Citrullus lanatus HOM05D004490 ORTHO05D005353 1.9e-50 203.4 190 55.8
Eucgr.F04124 Eucalyptus grandis HOM05D004490 ORTHO05D005353 2.5e-50 203.0 188 61.2
arahy.Tifrunner.gnm1.ann1.2Y7GNB Arachis hypogaea HOM05D004490 ORTHO05D005353 5.5e-50 201.8 189 59.8
Haze_17934 Corylus avellana HOM05D004490 ORTHO05D005353 7.2e-50 201.4 193 56.0
PGR102G0893 Punica granatum HOM05D004490 ORTHO05D005353 7.2e-50 201.4 195 60.0
EL10Ac1g00080 Beta vulgaris HOM05D004490 ORTHO05D005353 9.4e-50 201.1 191 57.1
CsaV3_7G024020 Cucumis sativus L. HOM05D004490 ORTHO05D005353 9.4e-50 201.1 190 55.3
SalBow4G3000 Salvia bowleyana HOM05D004490 ORTHO05D005353 9.4e-50 201.1 192 57.3
SalBow7G0993 Salvia bowleyana HOM05D004490 ORTHO05D005353 9.4e-50 201.1 192 57.3
MELO3C024104.2 Cucumis melo HOM05D004490 ORTHO05D005353 2.7e-49 199.5 190 55.3
MD04G1003500 Malus domestica HOM05D004490 ORTHO05D005353 2.7e-49 199.5 190 58.4
CiPaw.16G061300 Carya illinoinensis HOM05D004490 ORTHO05D005353 3.6e-49 199.1 190 54.2
Cfa018184 Carpinus fangiana HOM05D004490 ORTHO05D005353 6.1e-49 198.4 193 54.9
Glyma.10G216200 Glycine max HOM05D004490 ORTHO05D005353 6.1e-49 198.4 194 54.1
Nn5g27710 Nelumbo nucifera HOM05D004490 ORTHO05D005353 8.0e-49 198.0 187 59.4
Potri.019G083700 Populus trichocarpa HOM05D004490 ORTHO05D005353 8.0e-49 198.0 189 59.3
Lalb_Chr21g0305821 Lupinus albus HOM05D004490 ORTHO05D005353 1.4e-48 197.2 194 55.2
QL02p033840 Quercus lobata HOM05D004490 ORTHO05D005353 2.3e-48 196.4 187 54.5
Glyma.20G175700 Glycine max HOM05D004490 ORTHO05D005353 4.0e-48 195.7 191 53.9
Hma1.2p1_0363F.1_g136660 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 4.0e-48 195.7 188 55.3
Oeu021013.3 Olea europaea HOM05D004490 ORTHO05D005353 4.0e-48 195.7 188 59.6
Ciclev10000724m.g Citrus clementina HOM05D004490 ORTHO05D005353 6.8e-48 194.9 190 56.3
SGA_v2.0_scaffold118G32473 Striga asiatica HOM05D004490 ORTHO05D005353 6.8e-48 194.9 180 58.3
Thecc.08G183200 Theobroma cacao HOM05D004490 ORTHO05D005353 8.8e-48 194.5 188 56.4
Cpa.g.sc66.44 Carica papaya HOM05D004490 ORTHO05D005353 1.5e-47 193.7 194 57.2
Dinv41710 Davidia involucrata HOM05D004490 ORTHO05D005353 1.5e-47 193.7 190 54.2
Sabra19G0095100 Salix brachista HOM05D004490 ORTHO05D005353 2.0e-47 193.4 189 59.3
ATR1098G081 Amborella trichopoda HOM05D004490 ORTHO05D008312 2.6e-47 193.0 177 57.6
ECA234G1973 Erigeron canadensis HOM05D004490 ORTHO05D005353 2.6e-47 193.0 191 53.9
FAN07G2233 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.6e-47 193.0 190 54.7
Psat6g187400 Pisum sativum HOM05D004490 ORTHO05D005353 2.6e-47 193.0 190 54.7
TWI63G0531 Tripterygium wilfordii HOM05D004490 ORTHO05D005353 2.6e-47 193.0 194 53.6
FAN12G1529 Fragaria x ananassa HOM05D004490 ORTHO05D005353 3.4e-47 192.6 190 54.7
DCAR_014360 Daucus carota HOM05D004490 ORTHO05D005353 4.4e-47 192.2 188 54.8
Os01g0521500 Oryza sativa ssp. japonica HOM05D004490 ORTHO05D005353 7.5e-47 191.4 189 59.3
Aqoxy2G03181 Aquilegia oxysepala HOM05D004490 ORTHO05D005353 9.8e-47 191.0 188 54.8
Ca_10614_v3 Cicer arietinum L. HOM05D004490 ORTHO05D005353 9.8e-47 191.0 194 54.6
FAN17G1649 Fragaria x ananassa HOM05D004490 ORTHO05D005353 9.8e-47 191.0 190 54.7
FvH4_4g06470 Fragaria vesca HOM05D004490 ORTHO05D005353 1.3e-46 190.7 190 54.2
TAR208G0002 Trochodendron aralioides HOM05D004490 ORTHO05D005353 1.3e-46 190.7 189 52.4
CDE08G1471 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 1.7e-46 190.3 186 53.8
Phvul.007G089700 Phaseolus vulgaris HOM05D004490 ORTHO05D005353 1.7e-46 190.3 191 52.9
RcHm_v2.0_Chr4g0398261 Rosa chinensis HOM05D004490 ORTHO05D005353 2.2e-46 189.9 190 53.7
THA.LOC104816311 Tarenaya hassleriana HOM05D004490 ORTHO05D005353 2.8e-46 189.5 194 53.6
EL10Ac1g00082 Beta vulgaris HOM05D004490 ORTHO05D005353 4.8e-46 188.7 189 54.0
Sc23g0001210 Simmondsia chinensis HOM05D004490 ORTHO05D005353 6.3e-46 188.3 197 58.4
TPR.G8816 Trifolium pratense HOM05D004490 ORTHO05D005353 1.1e-45 187.6 191 53.4
Prupe.8G058000 Prunus persica HOM05D004490 ORTHO05D005353 1.4e-45 187.2 189 55.0
Medtr1g096410 Medicago truncatula HOM05D004490 ORTHO05D005353 1.8e-45 186.8 194 54.1
Migut.C01248 Erythranthe guttata HOM05D004490 ORTHO05D005353 2.4e-45 186.4 194 55.7
Lj5g0002115 Lotus japonicus HOM05D004490 ORTHO05D005353 2.4e-45 186.4 194 52.1
Mapoly0003s0077 Marchantia polymorpha HOM05D004490 ORTHO05D005353 7.0e-45 184.9 203 54.7
Atru.chr12.1269 Acer truncatum HOM05D004490 ORTHO05D005353 1.2e-44 184.1 190 53.7
PSO017G7136 Papaver somniferum HOM05D004490 ORTHO05D005353 1.2e-44 184.1 189 51.9
arahy.Tifrunner.gnm1.ann1.90XUFN Arachis hypogaea HOM05D004490 ORTHO05D005353 1.6e-44 183.7 177 59.3
PSO063G0599 Papaver somniferum HOM05D004490 ORTHO05D005353 1.6e-44 183.7 189 52.4
Carub.0002s1095 Capsella rubella HOM05D004490 ORTHO05D005353 2.0e-44 183.3 196 51.0
AUR62022689 Chenopodium quinoa HOM05D004490 ORTHO05D005353 2.0e-44 183.3 190 54.2
Lsat_1_v5_gn_5_105541 Lactuca sativa HOM05D004490 ORTHO05D005353 2.0e-44 183.3 190 54.7
AL2G20400 Arabidopsis lyrata HOM05D004490 ORTHO05D005353 2.7e-44 183.0 196 54.6
CARHR056930 Cardamine hirsuta HOM05D004490 ORTHO05D005353 3.5e-44 182.6 195 52.3
HanXRQChr10g0290501 Helianthus annuus HOM05D004490 ORTHO05D005353 3.5e-44 182.6 191 57.1
AT1G65280 Arabidopsis thaliana HOM05D004490 ORTHO05D005353 5.9e-44 181.8 196 54.6
CSS0027711 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 1.0e-43 181.0 172 58.1
Solyc11g018670.3 Solanum lycopersicum HOM05D004490 ORTHO05D005353 2.2e-43 179.9 190 59.5
CSS0045593 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 2.9e-43 179.5 172 58.7
A09p29500 Brassica napus HOM05D004490 ORTHO05D005353 5.0e-43 178.7 199 53.8
BraA09t38516Z Brassica rapa HOM05D004490 ORTHO05D005353 5.0e-43 178.7 199 53.8
BcaC04g20957 Brassica carinata HOM05D004490 ORTHO05D005353 1.9e-42 176.8 199 53.3
BNapus_Darmor_BZH_scaffold_278p00040 Brassica napus HOM05D004490 ORTHO05D005353 1.9e-42 176.8 199 53.3
BolC9t56586H Brassica oleracea HOM05D004490 ORTHO05D005353 1.9e-42 176.8 199 53.3
Sp6g08010 Schrenkiella parvula HOM05D004490 ORTHO05D005353 1.9e-42 176.8 198 52.5
Thhalv10028527m.g Eutrema salsugineum HOM05D004490 ORTHO05D005353 3.2e-42 176.0 197 52.8
VMungo0720G0360 Vigna mungo HOM05D004490 ORTHO05D005353 3.2e-42 176.0 178 52.2
CANSAT64G2929 Cannabis sativa HOM05D004490 ORTHO05D005353 4.2e-42 175.6 195 51.3
AUR62004649 Chenopodium quinoa HOM05D004490 ORTHO05D005353 7.2e-42 174.9 192 56.2
RcHm_v2.0_Chr5g0081671 Rosa chinensis HOM05D004490 ORTHO05D005353 9.4e-42 174.5 192 53.1
Lj7A289G25 Lonicera japonica HOM05D004490 ORTHO05D005353 1.2e-41 174.1 207 49.3
RcHm_v2.0_Chr5g0082701 Rosa chinensis HOM05D004490 ORTHO05D005353 1.6e-41 173.7 192 53.1
Hund27085 Selenicereus undatus HOM05D004490 ORTHO05D005353 3.6e-41 172.6 180 52.2
Pp3c14_7350 Physcomitrium patens HOM05D004490 ORTHO05D005353 6.1e-41 171.8 203 52.7
Zm00001eb427930 Zea mays HOM05D004490 ORTHO05D005353 2.3e-40 169.9 190 54.7
Aa31LG9G14890 Aethionema arabicum HOM05D004490 ORTHO05D005353 3.0e-40 169.5 196 54.1
Sopen11g009650 Solanum pennellii HOM05D004490 ORTHO05D005353 3.0e-40 169.5 190 57.4
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 6.8e-40 168.3 189 56.1
CDE02G3308 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 8.8e-40 167.9 165 58.2
BcaB01g01408 Brassica carinata HOM05D004490 ORTHO05D005353 2.0e-39 166.8 200 51.5
FvH4_3g44892 Fragaria vesca HOM05D004490 ORTHO05D005353 2.0e-39 166.8 174 52.9
HPP92_020159 Vanilla planifolia HOM05D004490 ORTHO05D005353 2.6e-39 166.4 190 50.5
SEGI_30950 Sequoiadendron giganteum HOM05D023998 ORTHO05D005353 4.4e-39 165.6 96 84.4
FAN21G1156 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.8e-37 160.2 168 54.2
Peaxi162Scf00848g00115 Petunia axillaris HOM05D004490 ORTHO05D005353 2.4e-37 159.8 190 48.9
AUR62022497 Chenopodium quinoa HOM05D004490 ORTHO05D005353 4.1e-37 159.1 186 48.9
Nitab4.5_0000277g0020 Nicotiana tabacum HOM05D004490 ORTHO05D005353 4.1e-37 159.1 189 54.0
CAN.G905.35 Capsicum annuum HOM05D004490 ORTHO05D005353 3.5e-36 156.0 190 54.2
vmacro11670 Vaccinium macrocarpon HOM05D004490 ORTHO05D005353 3.5e-36 156.0 196 45.9
CSS0029963 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 1.7e-35 153.7 189 50.3
unitig_699.g19825 Utricularia gibba HOM05D004490 ORTHO05D005353 1.7e-35 153.7 201 46.8
SHI09004 Sapria himalayana HOM05D004490 ORTHO05D005353 8.6e-35 151.4 189 52.9
FAN11G3016 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.5e-34 149.8 168 51.2
CBR_g58400 Chara braunii HOM05D004490 ORTHO05D005353 3.3e-34 149.4 199 46.2
Rhsim11G0059700 Rhododendron simsii HOM05D004490 ORTHO05D005353 2.1e-33 146.7 198 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3521 Anthoceros agrestis HOM05D004490 ORTHO05D005353 1.4e-29 134.0 195 41.5
FAN25G2105 Fragaria x ananassa HOM05D004490 ORTHO05D005353 7.0e-29 131.7 145 51.7
TAR630G0004 Trochodendron aralioides HOM05D004490 ORTHO05D005353 4.7e-25 119.0 116 53.4
TAR622G0885 Trochodendron aralioides HOM05D004490 ORTHO05D005353 6.1e-25 118.6 115 53.9
Prupe.3G081100 Prunus persica HOM05D004490 ORTHO05D005353 5.8e-23 112.1 190 37.9
PRCOL_00002362 Prasinoderma coloniale HOM05D004490 ORTHO05D005353 9.8e-23 111.3 222 34.7
RcHm_v2.0_Chr5g0082081 Rosa chinensis HOM05D004490 ORTHO05D005353 9.8e-23 111.3 122 54.1
SHI54375 Sapria himalayana HOM05D004490 ORTHO05D005353 9.8e-23 111.3 128 50.8
SHI41020 Sapria himalayana HOM05D004490 ORTHO05D005353 2.2e-22 110.2 128 50.0
Hma1.2p1_0363F.1_g136650 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 1.9e-21 107.1 84 59.5
FvH4_3g44966 Fragaria vesca HOM05D004490 ORTHO05D005353 3.5e-20 102.8 106 53.8
Sopen01g003870 Solanum pennellii HOM05D004490 ORTHO05D005353 7.8e-20 101.7 153 43.8
Gorai.012G182200 Gossypium raimondii HOM05D004490 ORTHO05D005353 1.3e-19 100.9 189 36.0
PGSC0003DMG400016394 Solanum tuberosum HOM05D004490 ORTHO05D002367 8.6e-19 98.2 165 41.8
FvH4_3g44960 Fragaria vesca HOM05D004490 ORTHO05D005353 1.1e-16 91.3 99 55.6
Gohir.A04G142550 Gossypium hirsutum HOM05D004490 ORTHO05D005353 6.8e-16 88.6 189 34.4
FAN11G0711 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.4e-13 80.9 120 46.7
SEGI_29916 Sequoiadendron giganteum HOM05D023998 ORTHO05D005353 1.9e-13 80.5 47 78.7
Gohir.D04G186001 Gossypium hirsutum HOM05D004490 ORTHO05D005353 4.1e-13 79.3 107 44.9
Actinidia03513 Actinidia chinensis HOM05D004490 ORTHO05D005353 3.6e-09 66.2 51 64.7
MCO12G010 Micromonas commoda HOM05D004490 ORTHO05D005353 1.2e-07 61.2 221 34.4
vmacro00772 Vaccinium macrocarpon HOM05D004490 ORTHO05D005353 4.9e-06 55.8 72 43.1


User provided reference genes

Program Settings