Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 2.1e-67 258.8 128 100.0
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 4.6e-38 161.4 77 100.0
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 8.5e-16 87.4 44 81.8
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 8.5e-16 87.4 44 81.8
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 8.5e-16 87.4 44 81.8
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 8.5e-16 87.4 51 74.5
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 8.5e-16 87.4 51 74.5
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 8.5e-16 87.4 51 74.5
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 1.1e-15 87.0 58 69.0
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 1.1e-15 87.0 51 76.5
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 1.5e-15 86.7 39 92.3
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 2.5e-15 85.9 51 74.5
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 2.5e-15 85.9 51 74.5
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 4.2e-15 85.1 51 74.5
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 4.2e-15 85.1 44 81.8
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 5.5e-15 84.7 50 76.0
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 5.5e-15 84.7 39 92.3
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 7.2e-15 84.3 39 92.3
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 7.2e-15 84.3 39 92.3
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 7.2e-15 84.3 39 92.3
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 7.2e-15 84.3 45 82.2
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 7.2e-15 84.3 62 64.5
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 9.4e-15 84.0 43 83.7
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 9.4e-15 84.0 46 78.3
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 1.2e-14 83.6 46 82.6
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 1.2e-14 83.6 38 89.5
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 1.2e-14 83.6 43 83.7
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 1.2e-14 83.6 50 76.0
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.2e-14 83.6 50 76.0
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 1.2e-14 83.6 43 81.4
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 1.2e-14 83.6 43 81.4
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 1.6e-14 83.2 46 82.6
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 1.6e-14 83.2 45 80.0
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 1.6e-14 83.2 39 89.7
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 1.6e-14 83.2 46 76.1
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 1.6e-14 83.2 46 76.1
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 1.6e-14 83.2 43 79.1
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 1.6e-14 83.2 43 83.7
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 2.1e-14 82.8 39 89.7
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 2.1e-14 82.8 39 89.7
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 2.1e-14 82.8 45 77.8
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 2.1e-14 82.8 38 86.8
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 2.1e-14 82.8 39 89.7
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 2.1e-14 82.8 50 76.0
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 2.1e-14 82.8 39 89.7
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 2.1e-14 82.8 39 89.7
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 2.7e-14 82.4 52 75.0
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 2.7e-14 82.4 47 78.7
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 2.7e-14 82.4 47 78.7
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 2.7e-14 82.4 47 74.5
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 2.7e-14 82.4 43 79.1
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 2.7e-14 82.4 52 73.1
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 2.7e-14 82.4 41 80.5
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 3.6e-14 82.0 40 85.0
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 3.6e-14 82.0 51 70.6
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 3.6e-14 82.0 39 84.6
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 4.7e-14 81.6 39 87.2
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 4.7e-14 81.6 50 72.0
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 4.7e-14 81.6 39 87.2
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 4.7e-14 81.6 39 87.2
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 6.1e-14 81.3 44 81.8
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 6.1e-14 81.3 46 82.6
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 6.1e-14 81.3 47 76.6
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 6.1e-14 81.3 46 82.6
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 6.1e-14 81.3 46 82.6
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 6.1e-14 81.3 47 76.6
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 6.1e-14 81.3 46 82.6
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 6.1e-14 81.3 46 82.6
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 6.1e-14 81.3 47 76.6
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 6.1e-14 81.3 46 78.3
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 6.1e-14 81.3 43 79.1
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 6.1e-14 81.3 39 87.2
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 6.1e-14 81.3 39 87.2
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 6.1e-14 81.3 39 87.2
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 6.1e-14 81.3 39 87.2
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 6.1e-14 81.3 39 87.2
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 6.1e-14 81.3 43 76.7
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 8.0e-14 80.9 42 81.0
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 8.0e-14 80.9 39 82.1
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 1.0e-13 80.5 45 77.8
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 1.0e-13 80.5 61 62.3
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 1.0e-13 80.5 53 67.9
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 1.0e-13 80.5 45 75.6
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 1.4e-13 80.1 43 81.4
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 1.4e-13 80.1 47 74.5
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.4e-13 80.1 37 89.2
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 1.4e-13 80.1 55 65.5
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 1.4e-13 80.1 46 73.9
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 1.4e-13 80.1 39 87.2
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.4e-13 80.1 39 87.2
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 1.8e-13 79.7 39 84.6
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 1.8e-13 79.7 37 89.2
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.8e-13 79.7 39 87.2
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 2.3e-13 79.3 39 82.1
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 2.3e-13 79.3 39 82.1
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 2.3e-13 79.3 39 87.2
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 2.3e-13 79.3 39 84.6
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 3.0e-13 79.0 39 84.6
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 4.0e-13 78.6 45 71.1
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 4.0e-13 78.6 50 68.0
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 5.2e-13 78.2 39 84.6
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 6.8e-13 77.8 48 68.8
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 6.8e-13 77.8 53 66.0
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 6.8e-13 77.8 41 78.0
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 8.8e-13 77.4 39 84.6
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.2e-12 77.0 37 83.8
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 1.2e-12 77.0 49 73.5
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 1.5e-12 76.6 49 73.5
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 2.6e-12 75.9 46 73.9
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 5.7e-12 74.7 48 64.6
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 1.7e-11 73.2 48 62.5
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 3.1e-10 68.9 39 71.8
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 7.0e-10 67.8 49 59.2
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 9.1e-10 67.4 84 42.9
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 2.0e-09 66.2 49 57.1
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 4.5e-09 65.1 39 66.7
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 1.5e-07 60.1 48 56.2
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 1.9e-07 59.7 39 59.0
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 9.4e-07 57.4 39 56.4


User provided reference genes

Program Settings