Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.1e-48 196.4 112 100.0
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 9.7e-40 166.8 106 82.1
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 1.6e-26 122.9 102 59.8
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.6e-26 122.9 81 71.6
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 2.1e-26 122.5 102 59.8
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 2.7e-26 122.1 98 60.2
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 3.6e-26 121.7 102 58.8
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 4.7e-26 121.3 102 58.8
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 6.1e-26 120.9 81 74.1
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 6.1e-26 120.9 81 74.1
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 6.1e-26 120.9 102 59.8
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 6.1e-26 120.9 102 59.8
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 6.1e-26 120.9 81 70.4
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 1.0e-25 120.2 102 57.8
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 1.0e-25 120.2 102 58.8
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 1.4e-25 119.8 81 70.4
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 1.8e-25 119.4 81 71.6
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 1.8e-25 119.4 81 69.1
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 2.3e-25 119.0 81 69.1
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.3e-25 119.0 102 58.8
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 2.3e-25 119.0 81 69.1
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 2.3e-25 119.0 81 69.1
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 2.3e-25 119.0 81 71.6
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 3.0e-25 118.6 102 58.8
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 3.9e-25 118.2 81 70.4
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 3.9e-25 118.2 81 69.1
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 5.2e-25 117.9 102 57.8
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 5.2e-25 117.9 102 58.8
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 5.2e-25 117.9 81 69.1
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 5.2e-25 117.9 81 70.4
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 6.7e-25 117.5 102 57.8
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 6.7e-25 117.5 98 58.2
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 6.7e-25 117.5 81 70.4
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 6.7e-25 117.5 84 71.4
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 8.8e-25 117.1 81 70.4
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 8.8e-25 117.1 102 59.8
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 8.8e-25 117.1 102 57.8
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 8.8e-25 117.1 103 56.3
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 8.8e-25 117.1 81 69.1
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 8.8e-25 117.1 98 59.2
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 8.8e-25 117.1 81 66.7
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.1e-24 116.7 102 58.8
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 1.1e-24 116.7 102 56.9
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 1.5e-24 116.3 102 56.9
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 1.5e-24 116.3 81 67.9
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 2.0e-24 115.9 102 56.9
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 4.4e-24 114.8 81 67.9
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 4.4e-24 114.8 81 67.9
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 4.4e-24 114.8 81 67.9
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 7.4e-24 114.0 81 66.7
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 7.4e-24 114.0 102 54.9
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 9.7e-24 113.6 102 54.9
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 9.7e-24 113.6 81 66.7
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 9.7e-24 113.6 81 66.7
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 9.7e-24 113.6 81 66.7
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 9.7e-24 113.6 102 54.9
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 1.3e-23 113.2 102 54.9
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.3e-23 113.2 102 54.9
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 1.7e-23 112.8 102 55.9
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 1.7e-23 112.8 81 67.9
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 2.2e-23 112.5 81 66.7
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 2.8e-23 112.1 102 54.9
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 2.8e-23 112.1 81 65.4
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 2.8e-23 112.1 81 65.4
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 2.8e-23 112.1 81 65.4
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 2.8e-23 112.1 102 56.9
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 2.8e-23 112.1 81 66.7
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 2.8e-23 112.1 81 65.4
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 3.7e-23 111.7 81 65.4
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 3.7e-23 111.7 104 53.8
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 3.7e-23 111.7 81 65.4
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 6.3e-23 110.9 102 52.0
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 6.3e-23 110.9 102 52.0
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 6.3e-23 110.9 102 53.9
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 8.2e-23 110.5 102 50.0
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 1.1e-22 110.2 102 52.9
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 1.4e-22 109.8 102 53.9
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 1.8e-22 109.4 81 66.7
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 1.8e-22 109.4 98 55.1
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 3.1e-22 108.6 82 61.0
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 3.1e-22 108.6 102 51.0
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 3.1e-22 108.6 102 51.0
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 3.1e-22 108.6 102 49.0
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 3.1e-22 108.6 81 63.0
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 4.1e-22 108.2 81 63.0
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 4.1e-22 108.2 102 49.0
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 9.1e-22 107.1 102 52.9
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 9.1e-22 107.1 97 54.6
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 1.2e-21 106.7 119 47.9
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.6e-21 106.3 83 60.2
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 2.0e-21 105.9 98 53.1
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 4.5e-21 104.8 102 52.9
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 4.5e-21 104.8 102 47.1
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 7.7e-21 104.0 103 50.5
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 7.7e-21 104.0 81 64.2
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 1.0e-20 103.6 134 44.0
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 1.3e-20 103.2 105 49.5
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.7e-20 102.8 82 61.0
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 1.2e-16 90.1 85 52.9
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 7.5e-16 87.4 68 63.2
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 1.3e-15 86.7 72 61.1
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 2.2e-15 85.9 51 78.4
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 4.8e-15 84.7 55 67.3
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 4.8e-15 84.7 72 58.3
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 8.2e-15 84.0 71 59.2
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.8e-14 82.8 51 74.5
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.8e-14 82.8 51 74.5
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 3.1e-14 82.0 60 61.7
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 7.0e-14 80.9 51 74.5
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 2.0e-13 79.3 49 73.5
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 7.7e-13 77.4 67 55.2


User provided reference genes

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