Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.1e-206 723.0 355 100.0
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 3.1e-92 342.8 301 55.8
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 1.2e-91 340.9 294 54.8
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 7.7e-91 338.2 319 52.4
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.0e-90 337.8 294 56.1
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 1.7e-90 337.0 339 52.8
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 2.9e-90 336.3 305 53.4
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 2.9e-90 336.3 344 50.9
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 8.5e-90 334.7 297 55.9
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 8.5e-90 334.7 344 51.5
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 1.5e-89 334.0 268 59.3
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 5.5e-89 332.0 375 49.3
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 5.5e-89 332.0 296 54.1
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 7.2e-89 331.6 306 53.3
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 7.2e-89 331.6 342 51.2
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 9.4e-89 331.3 313 52.7
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.2e-88 330.9 310 52.6
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.2e-88 330.9 299 53.8
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.6e-88 330.5 300 53.7
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 2.1e-88 330.1 288 54.2
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 2.7e-88 329.7 301 54.2
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 2.7e-88 329.7 301 53.8
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 3.6e-88 329.3 329 52.3
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 4.7e-88 328.9 295 55.9
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 4.7e-88 328.9 339 50.4
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 6.1e-88 328.6 306 53.6
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 6.1e-88 328.6 342 50.9
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 8.0e-88 328.2 288 54.9
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.8e-87 327.0 335 51.3
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 3.0e-87 326.2 289 54.7
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 3.0e-87 326.2 294 53.1
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 3.0e-87 326.2 316 50.6
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 3.9e-87 325.9 328 52.4
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 3.9e-87 325.9 295 51.2
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 5.2e-87 325.5 306 51.6
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 8.8e-87 324.7 292 53.1
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 8.8e-87 324.7 297 52.9
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 8.8e-87 324.7 316 50.6
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 1.1e-86 324.3 298 52.7
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 1.5e-86 323.9 296 53.0
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.5e-86 323.9 297 52.9
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 2.0e-86 323.6 290 52.8
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 2.0e-86 323.6 306 52.0
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 2.6e-86 323.2 288 54.2
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 4.4e-86 322.4 332 48.2
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 5.7e-86 322.0 311 52.7
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 5.7e-86 322.0 295 52.9
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.7e-85 320.5 295 52.9
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.2e-85 320.1 288 55.2
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 2.8e-85 319.7 304 53.0
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.8e-85 319.7 319 51.1
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 3.7e-85 319.3 305 52.5
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 4.8e-85 318.9 307 51.8
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 4.8e-85 318.9 327 49.8
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 6.3e-85 318.5 230 61.7
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 8.2e-85 318.2 349 48.7
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 8.2e-85 318.2 307 50.5
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.1e-84 317.8 288 53.1
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 1.1e-84 317.8 315 52.1
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.1e-84 317.8 293 54.3
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 1.1e-84 317.8 349 47.6
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 1.4e-84 317.4 331 51.4
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 1.4e-84 317.4 313 53.0
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.8e-84 317.0 328 51.5
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 1.8e-84 317.0 331 48.6
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 2.4e-84 316.6 300 53.3
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 3.1e-84 316.2 335 49.3
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 4.1e-84 315.8 277 55.6
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 5.3e-84 315.5 300 51.3
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 5.3e-84 315.5 331 49.2
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 7.0e-84 315.1 347 48.4
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 9.1e-84 314.7 335 49.9
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.2e-83 314.3 299 52.2
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 2.0e-83 313.5 330 51.2
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 2.2e-82 310.1 298 53.4
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 6.5e-82 308.5 295 51.5
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 8.5e-82 308.1 294 51.7
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.9e-81 307.0 268 55.6
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 3.2e-81 306.2 313 51.1
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 4.2e-81 305.8 282 52.5
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 5.5e-81 305.4 289 53.3
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 7.2e-81 305.1 317 50.2
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 2.1e-80 303.5 369 45.3
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.4e-79 300.8 289 54.0
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 6.8e-79 298.5 279 51.6
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 1.5e-78 297.4 324 50.3
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 2.0e-78 297.0 300 51.7
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 2.0e-78 297.0 330 49.1
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 5.7e-78 295.4 324 49.7
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 1.1e-76 291.2 288 50.3
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 2.4e-76 290.0 219 61.6
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 3.1e-76 289.7 278 54.3
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 5.3e-76 288.9 323 49.8
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 5.3e-76 288.9 304 47.4
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 7.0e-76 288.5 319 47.3
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 3.5e-75 286.2 272 53.7
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 8.5e-74 281.6 324 49.7
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 8.5e-74 281.6 324 49.7
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 5.2e-71 272.3 306 48.4
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 3.4e-70 269.6 343 41.1
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 8.3e-69 265.0 245 54.3
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 1.3e-66 257.7 359 42.3
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 1.5e-62 244.2 282 47.5
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.7e-61 240.7 276 45.7
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 4.5e-59 232.6 209 52.2
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 1.4e-55 221.1 238 44.1
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.2e-51 208.0 204 51.5
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 1.7e-50 204.1 297 41.1
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 6.6e-50 202.2 296 39.2
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.3e-45 188.0 308 38.0
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 4.6e-43 179.5 195 47.7
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 9.5e-41 171.8 211 45.5
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 8.9e-39 165.2 180 47.2
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.2e-32 144.8 114 54.4
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 2.4e-31 140.6 157 45.9
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.9e-17 94.4 110 40.9
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 4.3e-17 93.2 142 38.0
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 3.3e-09 67.0 105 39.0
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 4.3e-09 66.6 114 36.0


User provided reference genes

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