Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05518 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.2e-250 869.4 437 100.0
SEGI_01018 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 8.5e-233 810.1 478 87.7
SEGI_34953 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.1e-215 750.7 453 85.7
SEGI_39398 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.5e-194 681.8 478 74.9
SEGI_30045 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.0e-194 681.0 478 74.7
SEGI_00654 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.5e-192 675.6 478 74.5
SEGI_39080 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.3e-192 675.2 478 74.5
SEGI_01619 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.3e-192 674.1 478 74.1
SEGI_08978 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.0e-189 666.0 463 74.9
SEGI_14024 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.9e-188 662.1 478 72.6
SEGI_11424 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.7e-185 652.9 478 71.1
SEGI_13303 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.9e-179 632.9 455 71.9
SEGI_39857 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.5e-160 570.1 314 92.7
SEGI_02873 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.8e-143 511.9 288 90.6
SEGI_21011 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.1e-142 509.2 332 80.1
SEGI_09628 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.8e-135 485.3 437 60.4
SEGI_30043 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.8e-135 485.3 437 60.4
SEGI_24051 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.4e-131 473.8 306 82.0
SEGI_25194 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.3e-128 462.6 343 72.0
SEGI_01179 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.4e-125 452.6 339 70.5
SEGI_24191 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.3e-116 424.1 283 77.0
SEGI_28448 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.1e-114 416.8 320 68.1
SEGI_12977 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.4e-97 360.9 296 64.2
SEGI_22032 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.3e-83 312.8 399 48.1
SEGI_19415 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.8e-66 256.9 167 77.8
SEGI_11933 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 2.4e-62 243.8 167 73.7
SEGI_17597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.8e-61 238.8 253 49.4
PSO017G5635 Papaver somniferum HOM05D007914 ORTHO05D006902 2.4e-49 200.7 476 31.9
SEGI_29479 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.4e-48 196.8 240 46.2
SEGI_27597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.3e-47 194.9 198 50.0
SEGI_40659 Sequoiadendron giganteum HOM05D000044 ORTHO05D006634 1.7e-44 184.5 175 52.0
PSO384G4122 Papaver somniferum HOM05D007914 ORTHO05D006902 1.9e-43 181.0 439 32.1
SEGI_15588 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.5e-37 160.2 151 53.0
SEGI_17638 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.3e-33 146.4 152 48.7
SEGI_29989 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.0e-31 142.1 144 50.0
SEGI_34863 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.6e-29 134.8 190 46.8
SEGI_17357 Sequoiadendron giganteum HOM05D000824 ORTHO05D006902 2.1e-29 134.4 141 55.3
SEGI_24050 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.1e-29 134.4 130 54.6
SEGI_12989 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.1e-25 120.2 151 43.7
SEGI_20543 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.5e-24 116.7 121 48.8
SEGI_07585 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.9e-24 116.3 202 36.1
SEGI_04345 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.8e-23 113.6 78 70.5
SEGI_00079 Sequoiadendron giganteum HOM05D000773 ORTHO05D000588 8.4e-23 112.5 205 34.1
Cre09.g417400 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 4.2e-22 110.2 468 25.6
SEGI_11065 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.1e-21 106.3 148 39.2
SEGI_25095 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.1e-21 106.3 105 53.3
Cre02.g142987 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 7.9e-21 105.9 487 25.9
Cre45.g760847 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 7.9e-21 105.9 487 25.9
Cre32.g758797 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.8e-20 104.8 490 25.7
SEGI_08593 Sequoiadendron giganteum HOM05D000074 ORTHO05D001793 6.7e-20 102.8 115 45.2
Lalb_Chr20g0114131 Lupinus albus HOM05D008038 ORTHO05D006902 1.9e-19 101.3 400 28.0
Duzib264G0258 Durio zibethinus HOM05D008038 ORTHO05D006902 9.7e-19 99.0 403 26.8
Hund18510 Selenicereus undatus HOM05D008038 ORTHO05D006902 1.3e-18 98.6 407 27.0
TAR375G0666 Trochodendron aralioides HOM05D008038 ORTHO05D006902 1.6e-18 98.2 413 27.6
QL08p043670 Quercus lobata HOM05D008038 ORTHO05D006902 3.7e-18 97.1 405 27.7
SEGI_28544 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.3e-18 96.3 101 48.5
Thecc.01G159700 Theobroma cacao HOM05D008038 ORTHO05D006902 8.2e-18 95.9 404 26.0
Prupe.3G170200 Prunus persica HOM05D008038 ORTHO05D006902 2.4e-17 94.4 433 26.6
PSO675G2703 Papaver somniferum HOM05D007914 ORTHO05D006902 4.1e-17 93.6 255 29.8
unitig_899.g15335 Utricularia gibba HOM05D008038 ORTHO05D006902 6.9e-17 92.8 407 28.0
PRCOL_00003757 Prasinoderma coloniale HOM05D008038 ORTHO05D006902 1.2e-16 92.0 404 24.0
PGR142G1605 Punica granatum HOM05D008038 ORTHO05D006902 1.2e-16 92.0 404 27.5
Cc05_g09210 Coffea canephora HOM05D008038 ORTHO05D006902 1.5e-16 91.7 422 28.0
FvH4_6g37811 Fragaria vesca HOM05D008038 ORTHO05D006902 2.6e-16 90.9 403 26.8
Lj6g0005294 Lotus japonicus HOM05D008038 ORTHO05D006902 3.4e-16 90.5 425 24.5
SGA_v2.0_scaffold46G17483 Striga asiatica HOM05D008038 ORTHO05D006902 1.3e-15 88.6 415 26.5
Potri.007G054500 Populus trichocarpa HOM05D008038 ORTHO05D006902 2.2e-15 87.8 407 25.1
Manes.02G085900 Manihot esculenta HOM05D008038 ORTHO05D006902 2.9e-15 87.4 439 26.4
PSO675G5731 Papaver somniferum HOM05D008038 ORTHO05D006902 6.5e-15 86.3 397 25.4
SEGI_33240 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 6.5e-15 86.3 396 25.0
Actinidia11192 Actinidia chinensis HOM05D008038 ORTHO05D006902 8.5e-15 85.9 411 26.0
Ah.15g095480 Amaranthus hybridus HOM05D008038 ORTHO05D006902 8.5e-15 85.9 389 26.7
PSO541G6518 Papaver somniferum HOM05D008038 ORTHO05D006902 1.4e-14 85.1 402 25.6
Rhsim06G0121400 Rhododendron simsii HOM05D008038 ORTHO05D006902 1.4e-14 85.1 408 27.7
Nitab4.5_0002737g0020 Nicotiana tabacum HOM05D008038 ORTHO05D006902 1.9e-14 84.7 422 25.1
arahy.Tifrunner.gnm1.ann1.6HAR6G Arachis hypogaea HOM05D008038 ORTHO05D006902 2.5e-14 84.3 415 26.5
COL.COLO4_33719 Corchorus olitorius HOM05D008038 ORTHO05D006902 2.5e-14 84.3 409 26.4
EL10Ac7g18043 Beta vulgaris HOM05D008038 ORTHO05D006902 3.2e-14 84.0 402 26.1
Aqoxy6G01154 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 4.2e-14 83.6 402 27.4
CiPaw.04G110800 Carya illinoinensis HOM05D008038 ORTHO05D006902 4.2e-14 83.6 407 26.5
Mapoly0078s0037 Marchantia polymorpha HOM05D008038 ORTHO05D006902 4.2e-14 83.6 407 24.3
CAN.G1481.7 Capsicum annuum HOM05D008038 ORTHO05D006902 9.4e-14 82.4 405 27.7
AUR62034636 Chenopodium quinoa HOM05D008038 ORTHO05D006902 9.4e-14 82.4 398 25.9
COL.COLO4_07289 Corchorus olitorius HOM05D008038 ORTHO05D006902 1.2e-13 82.0 420 25.0
AUR62036633 Chenopodium quinoa HOM05D008038 ORTHO05D006902 2.1e-13 81.3 375 25.3
Dinv12711 Davidia involucrata HOM05D008038 ORTHO05D006902 2.1e-13 81.3 410 25.6
Glyma.08G310900 Glycine max HOM05D008038 ORTHO05D006902 4.6e-13 80.1 204 30.4
PGSC0003DMG400017364 Solanum tuberosum HOM05D008038 ORTHO05D006902 4.6e-13 80.1 417 25.2
Lj6g0001787 Lotus japonicus HOM05D008038 ORTHO05D006902 6.1e-13 79.7 241 32.8
Nn1g09358 Nelumbo nucifera HOM05D008038 ORTHO05D006902 6.1e-13 79.7 244 30.3
AagrBONN_evm.TU.Sc2ySwM_368.536 Anthoceros agrestis HOM05D008038 ORTHO05D006902 1.0e-12 79.0 411 25.8
Sopen07g029260 Solanum pennellii HOM05D008038 ORTHO05D006902 1.0e-12 79.0 452 24.6
Dinv12709 Davidia involucrata HOM05D008038 ORTHO05D006902 1.4e-12 78.6 409 25.9
MSTRG.6764 Avicennia marina HOM05D008038 ORTHO05D006902 1.8e-12 78.2 450 25.8
PSO541G1774 Papaver somniferum HOM05D007914 ORTHO05D006902 1.8e-12 78.2 106 38.7
SEGI_04271 Sequoiadendron giganteum HOM05D012154 ORTHO05D006902 1.8e-12 78.2 390 26.9
Solyc07g055900.1 Solanum lycopersicum HOM05D008038 ORTHO05D006902 1.8e-12 78.2 512 24.2
SEGI_23601 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 2.3e-12 77.8 413 26.2
COL.COLO4_25756 Corchorus olitorius HOM05D008038 ORTHO05D006902 3.0e-12 77.4 417 24.9
Eucgr.K01193 Eucalyptus grandis HOM05D008038 ORTHO05D006902 3.0e-12 77.4 236 28.8
SEGI_08534 Sequoiadendron giganteum HOM05D000026 ORTHO05D000094 3.0e-12 77.4 162 34.0
SEGI_01490 Sequoiadendron giganteum HOM05D000526 ORTHO05D000956 3.9e-12 77.0 89 47.2
Aqoxy6G01155 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 5.1e-12 76.6 400 26.0
Pp3c20_2590 Physcomitrium patens HOM05D008038 ORTHO05D006902 5.1e-12 76.6 407 24.8
SEGI_39030 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 1.1e-11 75.5 407 25.3
arahy.Tifrunner.gnm1.ann1.I6EGUB Arachis hypogaea HOM05D008038 ORTHO05D006902 1.5e-11 75.1 416 24.8
PSO541G2104 Papaver somniferum HOM05D007914 ORTHO05D023061 5.7e-11 73.2 136 37.5
SEGI_12776 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.7e-11 73.2 62 56.5
Haze_15932 Corylus avellana HOM05D008038 ORTHO05D006902 9.7e-11 72.4 393 25.4
PSO339G4883 Papaver somniferum HOM05D007914 ORTHO05D006902 9.7e-11 72.4 226 28.3
SEGI_04810 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 2.8e-10 70.9 199 28.6
Nn1g09359 Nelumbo nucifera HOM05D008038 ORTHO05D006902 3.7e-10 70.5 243 29.2
Oeu026475.1 Olea europaea HOM05D008038 ORTHO05D006902 3.7e-10 70.5 211 31.3
Sc10g0010300 Simmondsia chinensis HOM05D008038 ORTHO05D006902 3.7e-10 70.5 189 31.2
A05p20940 Brassica napus HOM05D000096 ORTHO05D000045 6.3e-10 69.7 406 24.6
SEGI_40854 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.1e-09 68.9 77 46.8
CANSAT64G1128 Cannabis sativa HOM05D008038 ORTHO05D006902 2.4e-09 67.8 407 24.8
Pp3c19_4830 Physcomitrium patens HOM05D008038 ORTHO05D006902 7.7e-08 62.8 476 23.7
Mapoly0207s0005 Marchantia polymorpha HOM05D008038 ORTHO05D006902 1.0e-07 62.4 93 37.6
SEGI_21133 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 1.0e-07 62.4 299 26.8
PSO731G0091 Papaver somniferum HOM05D000096 ORTHO05D000045 1.3e-07 62.0 363 26.7
SEGI_22423 Sequoiadendron giganteum HOM05D010666 ORTHO05D006902 1.3e-07 62.0 108 38.0
SEGI_31205 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 2.2e-07 61.2 304 26.6
SEGI_00045 Sequoiadendron giganteum HOM05D012154 ORTHO05D009660 3.8e-07 60.5 123 36.6
SEGI_27914 Sequoiadendron giganteum HOM05D000018 ORTHO05D000187 3.8e-07 60.5 54 53.7
Cre06.g296150 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 6.5e-07 59.7 152 27.6
Cre16.g685613 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 6.5e-07 59.7 72 38.9
A04p12470 Brassica napus HOM05D000096 ORTHO05D000045 8.5e-07 59.3 433 24.0
SEGI_09296 Sequoiadendron giganteum HOM05D010666 ORTHO05D013100 8.5e-07 59.3 109 37.6
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-06 58.9 419 23.6
Cre12.g551550 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 7.2e-06 56.2 87 32.2
C06p16690 Brassica napus HOM05D000096 ORTHO05D000045 9.4e-06 55.8 405 24.7
CiPaw.01G177700 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.4e-06 55.8 154 29.2
SEGI_30585 Sequoiadendron giganteum HOM05D000280 ORTHO05D004091 9.4e-06 55.8 75 44.0


User provided reference genes

Program Settings