Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05417 Sequoiadendron giganteum HOM05D002204 ORTHO05D385712 5.7e-39 163.7 78 100.0
Migut.I00522 Erythranthe guttata HOM05D000137 ORTHO05D015106 7.5e-07 57.0 68 39.7
Migut.I00542 Erythranthe guttata HOM05D000137 ORTHO05D015106 7.5e-07 57.0 68 39.7
COL.COLO4_27941 Corchorus olitorius HOM05D002204 ORTHO05D002875 1.7e-06 55.8 70 40.0
TPR.G10639 Trifolium pratense HOM05D000084 ORTHO05D014270 1.7e-06 55.8 68 41.2
AL2G10010 Arabidopsis lyrata HOM05D002204 ORTHO05D002875 2.2e-06 55.5 61 39.3
AUR62042588 Chenopodium quinoa HOM05D002204 ORTHO05D002875 2.9e-06 55.1 61 36.1
LjContig00239g0005020 Lotus japonicus HOM05D000059 ORTHO05D005093 2.9e-06 55.1 68 38.2
GSVIVG01013402001 Vitis vinifera HOM05D002204 ORTHO05D002875 2.9e-06 55.1 56 41.1
Aa31LG10G5070 Aethionema arabicum HOM05D000055 ORTHO05D001675 3.7e-06 54.7 69 39.1
CARHR039180 Cardamine hirsuta HOM05D000055 ORTHO05D001675 3.7e-06 54.7 76 38.2
Duzib116G0346 Durio zibethinus HOM05D000038 ORTHO05D000423 3.7e-06 54.7 53 52.8
Carub.0001s3837 Capsella rubella HOM05D000055 ORTHO05D001675 4.9e-06 54.3 76 36.8
Thhalv10011721m.g Eutrema salsugineum HOM05D000055 ORTHO05D001675 4.9e-06 54.3 69 40.6
Glyma.10G239633 Glycine max HOM05D000059 ORTHO05D005093 4.9e-06 54.3 68 36.8
AT1G49180 Arabidopsis thaliana HOM05D000055 ORTHO05D001675 6.4e-06 53.9 69 37.7
Aqoxy5G00413 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 8.3e-06 53.5 51 52.9
ECA236G2650 Erigeron canadensis HOM05D000038 ORTHO05D000423 8.3e-06 53.5 58 46.6
Psat4g084280 Pisum sativum HOM05D000033 ORTHO05D002493 8.3e-06 53.5 74 33.8
SGA_v2.0_scaffold7G03703 Striga asiatica HOM05D000084 ORTHO05D015106 8.3e-06 53.5 52 42.3
Thecc.08G120900 Theobroma cacao HOM05D000038 ORTHO05D000423 8.3e-06 53.5 51 52.9


User provided reference genes

Program Settings