Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 5.5e-101 370.9 181 100.0
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 3.7e-57 225.3 141 77.3
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 5.3e-56 221.5 141 75.9
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 5.3e-56 221.5 141 73.8
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 3.5e-55 218.8 141 74.5
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 3.5e-55 218.8 141 73.8
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 5.9e-55 218.0 141 73.8
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 5.9e-55 218.0 141 72.3
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 7.7e-55 217.6 143 74.1
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 1.0e-54 217.2 141 74.5
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 1.3e-54 216.9 142 73.9
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 1.3e-54 216.9 142 73.9
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 1.3e-54 216.9 141 73.0
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.3e-54 216.9 141 75.2
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.3e-54 216.9 141 75.2
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 1.3e-54 216.9 141 73.8
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 2.2e-54 216.1 141 75.2
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 2.2e-54 216.1 154 68.8
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 3.8e-54 215.3 141 72.3
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 5.0e-54 214.9 141 73.8
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 6.5e-54 214.5 141 71.6
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 6.5e-54 214.5 141 71.6
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 6.5e-54 214.5 141 74.5
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 6.5e-54 214.5 141 73.0
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 8.5e-54 214.2 141 72.3
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 1.1e-53 213.8 141 73.0
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 1.5e-53 213.4 141 73.0
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 1.5e-53 213.4 141 71.6
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 1.5e-53 213.4 141 71.6
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 2.5e-53 212.6 154 69.5
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 3.2e-53 212.2 141 72.3
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 3.2e-53 212.2 141 73.0
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 4.2e-53 211.8 139 74.8
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 5.5e-53 211.5 141 71.6
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 7.2e-53 211.1 141 73.8
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 7.2e-53 211.1 141 71.6
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 7.2e-53 211.1 141 71.6
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 7.2e-53 211.1 154 69.5
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 9.4e-53 210.7 141 72.3
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 9.4e-53 210.7 139 74.1
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 1.2e-52 210.3 141 70.9
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 1.6e-52 209.9 141 70.9
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 2.1e-52 209.5 154 68.2
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 2.1e-52 209.5 141 71.6
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 2.1e-52 209.5 141 71.6
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 2.7e-52 209.1 154 68.8
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 3.6e-52 208.8 141 71.6
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 4.7e-52 208.4 141 71.6
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 4.7e-52 208.4 141 74.5
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 4.7e-52 208.4 154 68.2
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 4.7e-52 208.4 154 68.2
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 6.1e-52 208.0 154 68.2
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 6.1e-52 208.0 141 73.8
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 6.1e-52 208.0 139 73.4
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 8.0e-52 207.6 141 68.8
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 8.0e-52 207.6 141 69.5
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 8.0e-52 207.6 141 70.9
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 1.0e-51 207.2 141 71.6
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 1.0e-51 207.2 141 71.6
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 1.4e-51 206.8 140 73.6
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 1.4e-51 206.8 140 73.6
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 1.4e-51 206.8 140 73.6
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 1.4e-51 206.8 141 73.8
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.4e-51 206.8 141 73.8
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.4e-51 206.8 141 73.8
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 1.4e-51 206.8 141 70.9
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 1.8e-51 206.5 141 70.9
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 2.3e-51 206.1 141 71.6
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 2.3e-51 206.1 140 73.6
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 2.3e-51 206.1 140 73.6
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.3e-51 206.1 141 73.8
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 3.0e-51 205.7 154 67.5
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 3.0e-51 205.7 156 67.3
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 4.0e-51 205.3 154 68.2
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 4.0e-51 205.3 154 68.2
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 4.0e-51 205.3 141 73.0
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 4.0e-51 205.3 141 69.5
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 5.2e-51 204.9 138 73.2
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 5.2e-51 204.9 141 70.2
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 6.8e-51 204.5 141 70.9
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 6.8e-51 204.5 141 70.2
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 6.8e-51 204.5 141 70.2
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 8.8e-51 204.1 141 69.5
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 8.8e-51 204.1 141 73.0
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 8.8e-51 204.1 141 69.5
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 1.2e-50 203.8 141 68.8
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 2.0e-50 203.0 140 70.0
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 2.0e-50 203.0 140 71.4
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 4.4e-50 201.8 154 64.9
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 5.7e-50 201.4 141 68.8
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 7.5e-50 201.1 141 69.5
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 7.5e-50 201.1 140 70.0
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 2.8e-49 199.1 141 68.1
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 6.3e-49 198.0 141 70.9
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 6.3e-49 198.0 142 70.4
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 6.3e-49 198.0 139 68.3
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 1.1e-48 197.2 141 68.8
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 1.4e-48 196.8 139 69.8
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 1.4e-48 196.8 141 69.5
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 3.1e-48 195.7 141 68.1
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 4.1e-48 195.3 141 69.5
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 7.0e-48 194.5 143 66.4
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 1.6e-47 193.4 154 64.3
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 3.5e-47 192.2 148 66.9
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-46 188.7 142 65.5
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 6.6e-46 188.0 141 63.1
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 4.7e-44 181.8 139 63.3
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 4.7e-44 181.8 139 64.0
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 2.3e-43 179.5 139 61.2
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 2.4e-40 169.5 154 55.2
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.0e-39 166.4 120 70.0
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 2.7e-39 166.0 139 59.0
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.7e-38 163.3 141 58.9
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.1e-37 160.6 141 61.7
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-28 129.0 185 41.6
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 9.9e-10 67.8 57 61.4
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 4.6e-07 58.9 70 45.7


User provided reference genes

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