Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05372 Sequoiadendron giganteum HOM05D003652 ORTHO05D004190 1.9e-105 386.3 281 100.0
SEGI_20180 Sequoiadendron giganteum HOM05D003652 ORTHO05D004190 2.3e-66 256.5 144 100.0
ATR0772G136 Amborella trichopoda HOM05D003652 ORTHO05D004190 7.1e-23 112.1 223 39.0
Actinidia10649 Actinidia chinensis HOM05D003652 ORTHO05D004190 4.6e-22 109.4 223 39.5
CiPaw.07G160100 Carya illinoinensis HOM05D003652 ORTHO05D004190 2.3e-21 107.1 212 65.6
Potri.002G068900 Populus trichocarpa HOM05D003652 ORTHO05D004190 8.7e-21 105.1 232 51.3
Dinv25854 Davidia involucrata HOM05D003652 ORTHO05D004190 1.1e-20 104.8 211 37.9
Potri.005G191500 Populus trichocarpa HOM05D003652 ORTHO05D004190 1.5e-20 104.4 227 49.3
Sabra05G0146300 Salix brachista HOM05D003652 ORTHO05D004190 4.3e-20 102.8 225 36.0
CANSAT25G1176 Cannabis sativa HOM05D003652 ORTHO05D004190 2.1e-19 100.5 228 41.2
Sc02g0004140 Simmondsia chinensis HOM05D003652 ORTHO05D004190 2.1e-19 100.5 226 51.8
QL02p033637 Quercus lobata HOM05D003652 ORTHO05D004190 8.1e-19 98.6 232 53.0
MBI17_g21001_MAGBIO Magnolia biondii HOM05D003652 ORTHO05D004190 1.1e-18 98.2 87 62.1
Sabra02G0054200 Salix brachista HOM05D003652 ORTHO05D004190 1.1e-18 98.2 232 48.3
Aqoxy5G02100 Aquilegia oxysepala HOM05D003652 ORTHO05D004190 3.1e-18 96.7 234 34.6
MSTRG.22372 Avicennia marina HOM05D003652 ORTHO05D004190 3.1e-18 96.7 246 33.7
TAR376G0660 Trochodendron aralioides HOM05D003652 ORTHO05D004190 3.1e-18 96.7 213 37.6
TWI34G0668 Tripterygium wilfordii HOM05D003652 ORTHO05D004190 4.0e-18 96.3 225 33.3
TWI60G1418 Tripterygium wilfordii HOM05D003652 ORTHO05D004190 4.0e-18 96.3 224 57.1
Duzib116G0402 Durio zibethinus HOM05D003652 ORTHO05D004190 5.3e-18 95.9 226 37.6
TAR628G0150 Trochodendron aralioides HOM05D003652 ORTHO05D004190 5.3e-18 95.9 235 40.4
MD07G1075500 Malus domestica HOM05D003652 ORTHO05D004190 6.9e-18 95.5 233 37.8
HanXRQChr11g0339321 Helianthus annuus HOM05D003652 ORTHO05D004190 9.0e-18 95.1 220 37.7
Eucgr.F04242 Eucalyptus grandis HOM05D003652 ORTHO05D004190 1.2e-17 94.7 248 52.8
AUR62013575 Chenopodium quinoa HOM05D003652 ORTHO05D004190 2.6e-17 93.6 227 32.6
COL.COLO4_37836 Corchorus olitorius HOM05D003652 ORTHO05D004190 2.6e-17 93.6 224 34.4
Nn5g28722 Nelumbo nucifera HOM05D003652 ORTHO05D004190 3.4e-17 93.2 87 56.3
EL10Ac1g01536 Beta vulgaris HOM05D003652 ORTHO05D004190 4.5e-17 92.8 231 32.0
MELO3C024093.2 Cucumis melo HOM05D003652 ORTHO05D004190 4.5e-17 92.8 225 47.1
CsaV3_7G024680 Cucumis sativus L. HOM05D003652 ORTHO05D004190 4.5e-17 92.8 225 42.7
GSVIVG01034519001 Vitis vinifera HOM05D003652 ORTHO05D004190 4.5e-17 92.8 211 37.0
THA.LOC104812038 Tarenaya hassleriana HOM05D003652 ORTHO05D004190 5.8e-17 92.4 229 49.3
Rhsim08G0021800 Rhododendron simsii HOM05D003652 ORTHO05D004190 7.6e-17 92.0 226 34.1
Ah.05g167890 Amaranthus hybridus HOM05D003652 ORTHO05D004190 9.9e-17 91.7 227 43.6
CSS0021982 Camellia sinensis var. sinensis HOM05D003652 ORTHO05D004190 9.9e-17 91.7 223 39.0
Carub.0001s2061 Capsella rubella HOM05D003652 ORTHO05D004190 9.9e-17 91.7 225 47.1
Oeu014495.2 Olea europaea HOM05D003652 ORTHO05D004190 9.9e-17 91.7 230 30.9
AUR62026715 Chenopodium quinoa HOM05D003652 ORTHO05D004190 1.7e-16 90.9 227 33.9
Thecc.08G150000 Theobroma cacao HOM05D003652 ORTHO05D004190 1.7e-16 90.9 225 33.8
CDE06G1552 Ceratophyllum demersum HOM05D003652 ORTHO05D004190 2.9e-16 90.1 218 33.5
Medtr1g096550 Medicago truncatula HOM05D003652 ORTHO05D004190 3.8e-16 89.7 230 33.5
Ciclev10000108m.g Citrus clementina HOM05D003652 ORTHO05D004190 6.4e-16 89.0 111 46.8
Actinidia29525 Actinidia chinensis HOM05D003652 ORTHO05D004190 8.4e-16 88.6 110 44.5
Carub.0002s2373 Capsella rubella HOM05D003652 ORTHO05D004190 1.4e-15 87.8 235 49.8
Sp1g18810 Schrenkiella parvula HOM05D003652 ORTHO05D004190 1.4e-15 87.8 229 44.1
Glyma.20G174900 Glycine max HOM05D003652 ORTHO05D004190 1.9e-15 87.4 220 32.7
RcHm_v2.0_Chr1g0332001 Rosa chinensis HOM05D003652 ORTHO05D004190 1.9e-15 87.4 216 50.5
SGA_v2.0_scaffold19G08667 Striga asiatica HOM05D003652 ORTHO05D004190 1.9e-15 87.4 214 33.2
AL2G36970 Arabidopsis lyrata HOM05D003652 ORTHO05D004190 2.4e-15 87.0 227 52.4
PGR042G2936 Punica granatum HOM05D003652 ORTHO05D004190 2.4e-15 87.0 231 33.8
AT1G76850 Arabidopsis thaliana HOM05D003652 ORTHO05D004190 3.2e-15 86.7 227 55.1
SGA_v2.0_scaffold25G11172 Striga asiatica HOM05D003652 ORTHO05D004190 3.2e-15 86.7 214 32.7
Migut.N03225 Erythranthe guttata HOM05D003652 ORTHO05D004190 5.4e-15 85.9 227 37.0
Thhalv10018046m.g Eutrema salsugineum HOM05D003652 ORTHO05D004190 5.4e-15 85.9 227 34.8
Cpa.g.sc21.193 Carica papaya HOM05D003652 ORTHO05D004190 7.1e-15 85.5 226 45.1
Ca_10620_v3 Cicer arietinum L. HOM05D003652 ORTHO05D004190 7.1e-15 85.5 230 34.3
Lj5g0007913 Lotus japonicus HOM05D003652 ORTHO05D004190 7.1e-15 85.5 219 32.4
Atru.chr13.2145 Acer truncatum HOM05D003652 ORTHO05D004190 9.3e-15 85.1 212 36.3
Lalb_Chr21g0305741 Lupinus albus HOM05D003652 ORTHO05D004190 9.3e-15 85.1 219 34.2
Sp5g31980 Schrenkiella parvula HOM05D003652 ORTHO05D004190 1.2e-14 84.7 226 45.6
FvH4_7g05280 Fragaria vesca HOM05D003652 ORTHO05D004190 1.6e-14 84.3 214 45.3
Glyma.10G217200 Glycine max HOM05D003652 ORTHO05D004190 1.6e-14 84.3 228 41.7
Lj7C372G9 Lonicera japonica HOM05D003652 ORTHO05D004190 1.6e-14 84.3 107 46.7
Sed0009622 Sechium edule HOM05D003652 ORTHO05D004190 1.6e-14 84.3 213 45.5
CDE08G0217 Ceratophyllum demersum HOM05D003652 ORTHO05D004190 2.1e-14 84.0 91 54.9
MD02G1241200 Malus domestica HOM05D003652 ORTHO05D004190 2.7e-14 83.6 231 53.2
VMungo0720G3010 Vigna mungo HOM05D003652 ORTHO05D004190 2.7e-14 83.6 220 37.7
Peaxi162Scf00765g00049 Petunia axillaris HOM05D003652 ORTHO05D004190 3.5e-14 83.2 91 46.2
Psat6g186720 Pisum sativum HOM05D003652 ORTHO05D004190 3.5e-14 83.2 225 33.3
Lsat_1_v5_gn_7_71861 Lactuca sativa HOM05D003652 ORTHO05D004190 4.6e-14 82.8 214 33.2
Aa31LG4G6890 Aethionema arabicum HOM05D003652 ORTHO05D004190 6.0e-14 82.4 229 33.2
Nn1g06100 Nelumbo nucifera HOM05D003652 ORTHO05D004190 6.0e-14 82.4 85 52.9
TPR.G8817 Trifolium pratense HOM05D003652 ORTHO05D004190 6.0e-14 82.4 231 32.9
AagrBONN_evm.TU.Sc2ySwM_344.5035 Anthoceros agrestis HOM05D003652 ORTHO05D004190 7.9e-14 82.0 124 42.7
AT1G21170 Arabidopsis thaliana HOM05D003652 ORTHO05D004190 7.9e-14 82.0 232 47.4
Haze_22519 Corylus avellana HOM05D003652 ORTHO05D004190 7.9e-14 82.0 264 44.3
CAN.G268.10 Capsicum annuum HOM05D003652 ORTHO05D004190 1.0e-13 81.6 96 44.8
SalBow6G6910 Salvia bowleyana HOM05D003652 ORTHO05D004190 1.0e-13 81.6 225 52.9
Solyc04g071350.3 Solanum lycopersicum HOM05D003652 ORTHO05D004190 1.0e-13 81.6 218 36.2
BcaC08g45509 Brassica carinata HOM05D003652 ORTHO05D004190 1.3e-13 81.3 110 45.5
C06p31780 Brassica napus HOM05D003652 ORTHO05D004190 1.3e-13 81.3 110 45.5
BolC6t38307H Brassica oleracea HOM05D003652 ORTHO05D004190 1.3e-13 81.3 110 45.5
ECA236G0544 Erigeron canadensis HOM05D003652 ORTHO05D004190 1.3e-13 81.3 106 48.1
Gohir.D02G070200 Gossypium hirsutum HOM05D003652 ORTHO05D004190 1.3e-13 81.3 227 54.2
Gorai.005G079300 Gossypium raimondii HOM05D003652 ORTHO05D004190 1.3e-13 81.3 227 54.2
Oeu011939.2 Olea europaea HOM05D003652 ORTHO05D004190 1.3e-13 81.3 227 34.8
Hund26699 Selenicereus undatus HOM05D003652 ORTHO05D004190 1.3e-13 81.3 235 40.4
Sopen04g027310 Solanum pennellii HOM05D003652 ORTHO05D004190 1.3e-13 81.3 218 38.1
BcaB02g07077 Brassica carinata HOM05D003652 ORTHO05D004190 1.8e-13 80.9 110 44.5
unitig_744.g24568 Utricularia gibba HOM05D003652 ORTHO05D004190 1.8e-13 80.9 207 34.3
Os04g0421900 Oryza sativa ssp. japonica HOM05D003652 ORTHO05D004190 2.3e-13 80.5 233 57.5
A07p28340 Brassica napus HOM05D003652 ORTHO05D004190 3.0e-13 80.1 110 44.5
BraA07t30471Z Brassica rapa HOM05D003652 ORTHO05D004190 3.0e-13 80.1 110 44.5
Gohir.A02G064300 Gossypium hirsutum HOM05D003652 ORTHO05D004190 3.0e-13 80.1 227 53.7
Nitab4.5_0005705g0020 Nicotiana tabacum HOM05D003652 ORTHO05D004190 3.0e-13 80.1 233 35.2
Mapoly0098s0037 Marchantia polymorpha HOM05D003652 ORTHO05D004190 5.1e-13 79.3 123 47.2
Aa31LG7G5310 Aethionema arabicum HOM05D003652 ORTHO05D004190 8.7e-13 78.6 227 48.5
DCAR_014431 Daucus carota HOM05D003652 ORTHO05D004190 8.7e-13 78.6 104 49.0
C02p34110 Brassica napus HOM05D003652 ORTHO05D004190 1.5e-12 77.8 102 47.1
AL1G34230 Arabidopsis lyrata HOM05D003652 ORTHO05D004190 1.9e-12 77.4 227 48.9
CARHR070360 Cardamine hirsuta HOM05D003652 ORTHO05D004190 1.9e-12 77.4 227 47.1
Solyc12g056520.3 Solanum lycopersicum HOM05D003652 ORTHO05D004190 1.9e-12 77.4 97 42.3
Sopen12g029120 Solanum pennellii HOM05D003652 ORTHO05D004190 1.9e-12 77.4 97 42.3
Prupe.8G058700 Prunus persica HOM05D003652 ORTHO05D004190 3.3e-12 76.6 235 48.5
Nitab4.5_0008106g0020 Nicotiana tabacum HOM05D003652 ORTHO05D004190 4.3e-12 76.3 113 39.8
PGSC0003DMG400010789 Solanum tuberosum HOM05D003652 ORTHO05D004190 4.3e-12 76.3 102 39.2
SHI18207 Sapria himalayana HOM05D003652 ORTHO05D004190 5.6e-12 75.9 227 31.3
CAN.G89.17 Capsicum annuum HOM05D003652 ORTHO05D004190 9.6e-12 75.1 92 43.5
ClCG09G010020 Citrullus lanatus HOM05D003652 ORTHO05D004190 2.1e-11 73.9 193 39.9
arahy.Tifrunner.gnm1.ann1.2W1LLW Arachis hypogaea HOM05D003652 ORTHO05D004190 2.8e-11 73.6 89 47.2
arahy.Tifrunner.gnm1.ann1.8KD3C5 Arachis hypogaea HOM05D003652 ORTHO05D004190 2.8e-11 73.6 89 47.2
HPP92_016941 Vanilla planifolia HOM05D003652 ORTHO05D004190 3.7e-11 73.2 209 45.0
MBI09_g45353_MAGBIO Magnolia biondii HOM05D003652 ORTHO05D004190 4.8e-11 72.8 84 50.0
SMO118G0055 Selaginella moellendorffii HOM05D003652 ORTHO05D004190 8.1e-11 72.0 90 51.1
BcaC03g15706 Brassica carinata HOM05D003652 ORTHO05D004190 3.1e-10 70.1 226 34.5
Nitab4.5_0005926g0010 Nicotiana tabacum HOM05D003652 ORTHO05D004190 3.1e-10 70.1 233 46.4
A02p20920 Brassica napus HOM05D003652 ORTHO05D004190 9.0e-10 68.6 100 46.0
FAN01G0918 Fragaria x ananassa HOM05D003652 ORTHO05D004190 9.0e-10 68.6 198 44.9
FAN03G2156 Fragaria x ananassa HOM05D003652 ORTHO05D004190 9.0e-10 68.6 198 44.9
FAN06G2696 Fragaria x ananassa HOM05D003652 ORTHO05D004190 9.0e-10 68.6 198 44.9
Cc10_g14750 Coffea canephora HOM05D003652 ORTHO05D004190 2.6e-09 67.0 243 39.9
Pp3c1_7430 Physcomitrium patens HOM05D003652 ORTHO05D004190 3.8e-08 63.2 128 39.1
Pp3c5_4060 Physcomitrium patens HOM05D003652 ORTHO05D004190 4.9e-08 62.8 135 36.3
ECA247G2571 Erigeron canadensis HOM05D003652 ORTHO05D004190 6.4e-08 62.4 102 40.2
PSO238G0028 Papaver somniferum HOM05D003652 ORTHO05D004190 6.4e-08 62.4 211 39.3
PSO210G4735 Papaver somniferum HOM05D003652 ORTHO05D004190 8.4e-08 62.0 211 39.3
Cfa013845 Carpinus fangiana HOM05D003652 ORTHO05D004190 6.0e-06 55.8 231 39.4
vmacro18508 Vaccinium macrocarpon HOM05D003652 ORTHO05D004190 6.0e-06 55.8 258 45.0


User provided reference genes

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