Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05265 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 7.2e-95 350.5 171 100.0
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 5.2e-45 184.9 168 53.6
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 2.0e-44 183.0 169 54.4
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 3.8e-43 178.7 167 52.7
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.4e-42 176.8 168 50.6
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.4e-42 176.8 168 50.6
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 1.0e-40 170.6 168 50.6
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 1.0e-40 170.6 166 51.8
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 6.6e-40 167.9 168 48.8
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 4.3e-39 165.2 170 51.2
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 4.3e-39 165.2 166 49.4
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 7.3e-39 164.5 166 48.8
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 7.3e-39 164.5 168 48.8
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 7.3e-39 164.5 168 49.4
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 9.6e-39 164.1 166 49.4
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.6e-38 163.3 168 48.2
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 2.1e-38 162.9 168 47.6
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 2.1e-38 162.9 168 47.6
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 2.1e-38 162.9 168 47.6
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 2.8e-38 162.5 168 49.4
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 2.8e-38 162.5 166 48.8
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 4.8e-38 161.8 166 48.8
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 4.8e-38 161.8 168 48.2
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 6.2e-38 161.4 166 48.2
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 6.2e-38 161.4 168 46.4
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 1.1e-37 160.6 168 47.6
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 1.4e-37 160.2 168 47.0
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 1.8e-37 159.8 168 47.6
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 3.1e-37 159.1 168 47.0
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 9.0e-37 157.5 169 47.3
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 1.5e-36 156.8 168 48.2
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 3.4e-36 155.6 169 46.7
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 4.4e-36 155.2 166 47.6
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 5.8e-36 154.8 166 47.0
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 7.6e-36 154.5 174 49.4
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 4.9e-35 151.8 166 44.6
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 6.4e-35 151.4 166 44.6
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 6.4e-35 151.4 168 49.4
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 1.9e-34 149.8 168 45.2
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 1.9e-34 149.8 166 46.4
MD14G1203500 Malus domestica HOM05D004701 ORTHO05D005220 3.2e-34 149.1 162 46.3
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 4.2e-34 148.7 172 45.3
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 4.2e-34 148.7 166 44.6
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 7.1e-34 147.9 172 45.3
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 1.2e-33 147.1 171 47.4
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.2e-33 147.1 168 46.4
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 6.0e-33 144.8 168 45.2
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 6.0e-33 144.8 168 44.0
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 7.8e-33 144.4 167 46.7
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 1.3e-32 143.7 171 43.9
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 1.7e-32 143.3 171 46.2
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.7e-32 143.3 166 45.8
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 6.6e-32 141.4 170 45.3
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 6.6e-32 141.4 168 43.5
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 1.9e-31 139.8 167 43.1
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 2.5e-31 139.4 172 43.6
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 5.6e-31 138.3 172 47.1
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 1.3e-30 137.1 169 45.6
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 1.6e-30 136.7 166 43.4
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 1.6e-30 136.7 166 43.4
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 1.6e-30 136.7 173 44.5
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 2.1e-30 136.3 166 45.2
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 3.6e-30 135.6 164 46.3
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 6.2e-30 134.8 169 42.6
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 6.2e-30 134.8 167 42.5
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 8.1e-30 134.4 173 43.4
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 8.1e-30 134.4 173 43.4
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 1.1e-29 134.0 171 42.1
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 1.1e-29 134.0 172 42.4
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 1.1e-29 134.0 172 42.4
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 1.4e-29 133.7 173 43.4
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 1.4e-29 133.7 173 43.4
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 4.0e-29 132.1 168 41.1
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 5.3e-29 131.7 171 42.7
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 1.2e-28 130.6 164 43.9
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 2.0e-28 129.8 172 42.4
SMO286G0020 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.4e-28 129.0 168 41.1
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 5.8e-28 128.3 171 42.1
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 5.8e-28 128.3 172 43.0
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 5.8e-28 128.3 171 39.8
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 1.3e-27 127.1 174 43.1
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 2.2e-27 126.3 172 43.0
SMO364G0054 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.8e-27 125.6 166 39.8
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 8.4e-27 124.4 173 40.5
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 1.4e-26 123.6 162 43.8
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 1.9e-26 123.2 173 40.5
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 3.2e-26 122.5 162 42.6
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 5.4e-26 121.7 173 39.9
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 5.4e-26 121.7 171 38.6
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 3.5e-25 119.0 173 41.0
SMO274G0004 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 6.0e-25 118.2 155 40.6
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 7.9e-25 117.9 171 39.2
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 1.3e-24 117.1 171 40.4
Cpa.g.sc341.2 Carica papaya HOM05D004701 ORTHO05D005220 2.3e-24 116.3 120 55.8
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 2.3e-24 116.3 166 36.1
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.1e-24 115.2 165 38.2
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 5.1e-24 115.2 171 39.8
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 4.3e-23 112.1 173 38.7
Actinidia04875 Actinidia chinensis HOM05D004701 ORTHO05D005220 7.4e-23 111.3 132 43.9
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 9.6e-23 110.9 173 38.7
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 2.1e-22 109.8 170 38.8
HPP92_019730 Vanilla planifolia HOM05D004701 ORTHO05D005220 1.2e-20 104.0 132 41.7
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 1.5e-20 103.6 127 43.3
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 2.0e-20 103.2 138 43.5
PGSC0003DMG400019522 Solanum tuberosum HOM05D004701 ORTHO05D005220 6.5e-19 98.2 129 44.2
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.1e-18 97.4 142 35.9
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 2.7e-17 92.8 168 32.1
SMO122G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.9e-17 91.3 141 35.5
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 2.3e-16 89.7 127 44.9
SMO274G0026 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.8e-14 82.8 123 38.2
SMO183G0003 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.4e-10 70.5 121 33.9
SMO286G0021 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.5e-10 68.6 169 30.8
SMO077G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.7e-09 66.2 110 38.2
AagrBONN_evm.TU.Sc2ySwM_344.2754 Anthoceros agrestis HOM05D004701 ORTHO05D005220 3.0e-08 62.8 83 39.8
SMO009G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.9e-07 60.1 155 29.7
SMO077G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.9e-07 60.1 141 25.5
Lsat_1_v5_gn_3_76880 Lactuca sativa HOM05D005083 ORTHO05D006310 2.5e-07 59.7 87 36.8
SMO274G0001 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.3e-07 58.9 54 46.3
SMO212G0008 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.8e-06 56.2 54 44.4


User provided reference genes

Program Settings