Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 3.0e-55 218.4 120 100.0
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 3.2e-33 145.2 120 64.2
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 5.5e-33 144.4 107 70.1
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 1.6e-32 142.9 117 65.8
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 3.6e-32 141.7 120 64.2
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 3.6e-32 141.7 120 65.0
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 4.7e-32 141.4 120 65.8
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 4.7e-32 141.4 120 65.0
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 6.1e-32 141.0 118 65.3
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 6.1e-32 141.0 118 65.3
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 6.1e-32 141.0 119 62.2
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.4e-31 139.8 116 63.8
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.4e-31 139.8 115 64.3
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 3.0e-31 138.7 116 63.8
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.0e-31 138.7 116 63.8
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.0e-31 138.7 116 63.8
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.0e-31 138.7 116 63.8
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 3.0e-31 138.7 117 63.2
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 3.0e-31 138.7 120 65.8
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 3.9e-31 138.3 117 61.5
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 3.9e-31 138.3 113 65.5
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 5.2e-31 137.9 120 63.3
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 5.2e-31 137.9 117 63.2
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 8.8e-31 137.1 116 64.7
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 1.1e-30 136.7 119 60.5
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 3.3e-30 135.2 116 64.7
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 4.4e-30 134.8 120 59.2
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 4.4e-30 134.8 120 62.5
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 7.4e-30 134.0 114 61.4
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 9.7e-30 133.7 117 64.1
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 9.7e-30 133.7 117 59.8
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.3e-29 133.3 119 62.2
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.7e-29 132.9 117 59.8
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 2.2e-29 132.5 117 60.7
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 2.2e-29 132.5 116 61.2
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 4.8e-29 131.3 117 59.8
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 4.8e-29 131.3 120 61.7
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 6.3e-29 131.0 119 57.1
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 6.3e-29 131.0 117 58.1
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 8.2e-29 130.6 120 60.0
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 8.2e-29 130.6 115 62.6
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 1.4e-28 129.8 117 58.1
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 1.4e-28 129.8 117 59.0
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 1.4e-28 129.8 117 58.1
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 1.8e-28 129.4 117 59.0
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 1.8e-28 129.4 117 59.0
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 1.8e-28 129.4 117 59.8
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 1.8e-28 129.4 120 58.3
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 2.4e-28 129.0 120 59.2
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 2.4e-28 129.0 119 58.8
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 2.4e-28 129.0 116 58.6
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 3.1e-28 128.6 117 59.0
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 5.3e-28 127.9 117 59.8
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 7.0e-28 127.5 117 58.1
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 7.0e-28 127.5 120 60.8
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 7.0e-28 127.5 120 55.8
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 7.0e-28 127.5 117 59.0
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 7.0e-28 127.5 117 59.8
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 9.1e-28 127.1 117 56.4
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 9.1e-28 127.1 120 55.8
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 1.2e-27 126.7 117 57.3
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 2.0e-27 125.9 117 59.0
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 2.0e-27 125.9 117 56.4
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 2.6e-27 125.6 117 58.1
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 2.6e-27 125.6 120 60.8
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 3.5e-27 125.2 117 57.3
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 3.5e-27 125.2 109 61.5
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 4.5e-27 124.8 120 58.3
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 5.9e-27 124.4 117 56.4
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 1.0e-26 123.6 117 59.0
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 1.0e-26 123.6 120 56.7
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 1.3e-26 123.2 120 56.7
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 1.3e-26 123.2 120 56.7
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 2.2e-26 122.5 120 55.8
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 2.9e-26 122.1 117 57.3
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 2.9e-26 122.1 117 56.4
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 2.9e-26 122.1 117 56.4
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 2.9e-26 122.1 119 55.5
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 3.8e-26 121.7 117 57.3
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 5.0e-26 121.3 119 55.5
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 5.0e-26 121.3 120 55.8
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 1.1e-25 120.2 119 53.8
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 3.2e-25 118.6 88 65.9
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 9.4e-25 117.1 118 55.1
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 1.2e-24 116.7 117 56.4
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.6e-24 116.3 120 53.3
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 2.1e-24 115.9 120 54.2
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 2.7e-24 115.5 119 55.5
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 2.7e-24 115.5 120 53.3
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 1.0e-23 113.6 120 56.7
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 1.4e-23 113.2 116 50.9
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 1.4e-23 113.2 90 65.6
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.8e-23 112.8 120 56.7
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 5.2e-23 111.3 117 52.1
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 9.7e-22 107.1 120 46.7
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 3.7e-21 105.1 150 45.3
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 1.0e-18 97.1 140 46.4
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 3.8e-18 95.1 119 45.4
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 8.5e-18 94.0 119 43.7
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.5e-17 93.2 83 57.8
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 1.5e-17 93.2 95 54.7
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 1.2e-16 90.1 87 50.6
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 8.8e-15 84.0 98 48.0
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 3.4e-14 82.0 115 41.7
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 4.4e-14 81.6 86 52.3
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 9.1e-12 73.9 116 43.1
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 7.2e-09 64.3 70 52.9
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 9.5e-09 63.9 50 64.0


User provided reference genes

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