Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05191 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 2.7e-200 701.8 364 100.0
SEGI_11879 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 8.3e-32 142.1 372 33.6
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 2.1e-14 84.3 281 32.0
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 3.5e-14 83.6 253 31.2
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 6.0e-14 82.8 150 39.3
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 4.3e-12 76.6 173 36.4
CDE02G3836 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 7.3e-12 75.9 92 53.3
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 9.5e-12 75.5 175 34.3
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 1.2e-11 75.1 215 32.1
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 1.2e-11 75.1 173 35.8
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 1.2e-11 75.1 155 39.4
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.2e-11 75.1 125 38.4
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 1.6e-11 74.7 174 36.2
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 1.6e-11 74.7 181 36.5
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 3.6e-11 73.6 145 36.6
CDE09G0187 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 6.2e-11 72.8 70 55.7
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 1.1e-10 72.0 148 35.1
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.8e-10 71.2 141 34.8
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 2.3e-10 70.9 180 30.6
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 2.3e-10 70.9 253 28.9
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 2.3e-10 70.9 136 36.0
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 3.1e-10 70.5 158 36.1
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 4.0e-10 70.1 127 39.4
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 5.2e-10 69.7 138 32.6
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 5.2e-10 69.7 145 35.2
PSO339G0439 Papaver somniferum HOM05D004206 ORTHO05D003325 6.8e-10 69.3 266 31.2
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 1.5e-09 68.2 206 35.9
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 3.4e-09 67.0 116 39.7
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 4.4e-09 66.6 59 52.5
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 4.4e-09 66.6 109 39.4
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 4.4e-09 66.6 143 37.1
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 4.4e-09 66.6 119 38.7
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 5.8e-09 66.2 59 52.5
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 7.6e-09 65.9 156 34.0
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 7.6e-09 65.9 111 37.8
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 9.9e-09 65.5 150 37.3
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 1.3e-08 65.1 152 38.2
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 1.3e-08 65.1 124 36.3
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 1.3e-08 65.1 172 30.2
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 2.2e-08 64.3 245 31.8
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 2.2e-08 64.3 144 35.4
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 2.2e-08 64.3 124 40.3
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 2.2e-08 64.3 134 35.8
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 2.9e-08 63.9 148 35.1
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 2.9e-08 63.9 147 36.1
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 2.9e-08 63.9 119 37.8
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 3.7e-08 63.5 203 30.0
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 3.7e-08 63.5 169 34.9
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 4.9e-08 63.2 252 29.8
Duzib128G2059 Durio zibethinus HOM05D004206 ORTHO05D003325 4.9e-08 63.2 129 34.1
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 6.4e-08 62.8 183 33.9
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 6.4e-08 62.8 100 39.0
ECA238G1623 Erigeron canadensis HOM05D000150 ORTHO05D000108 8.4e-08 62.4 136 35.3
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 8.4e-08 62.4 163 31.9
Actinidia07050 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.1e-07 62.0 113 38.9
ECA248G2846 Erigeron canadensis HOM05D004206 ORTHO05D003325 1.1e-07 62.0 124 33.1
PSO206G0053 Papaver somniferum HOM05D004206 ORTHO05D003325 1.1e-07 62.0 244 30.7
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 1.4e-07 61.6 103 35.0
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 1.4e-07 61.6 183 32.2
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 1.4e-07 61.6 101 41.6
CSS0031426 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D000289 1.9e-07 61.2 73 50.7
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 1.9e-07 61.2 176 30.7
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 1.9e-07 61.2 171 31.0
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 1.9e-07 61.2 188 29.3
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 2.4e-07 60.8 125 39.2
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 3.2e-07 60.5 162 30.9
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 3.2e-07 60.5 112 35.7
Psat3g048840 Pisum sativum HOM05D004206 ORTHO05D003325 3.2e-07 60.5 162 33.3
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 3.2e-07 60.5 124 34.7
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 4.1e-07 60.1 118 33.9
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 4.1e-07 60.1 166 31.3
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 5.4e-07 59.7 222 30.6
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 5.4e-07 59.7 189 31.7
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 5.4e-07 59.7 139 36.0
Lalb_Chr06g0171041 Lupinus albus HOM05D004206 ORTHO05D003325 5.4e-07 59.7 225 28.4
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 5.4e-07 59.7 123 32.5
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 5.4e-07 59.7 117 35.9
MSTRG.19101 Avicennia marina HOM05D004206 ORTHO05D003325 7.1e-07 59.3 138 31.9
vmacro20128 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 7.1e-07 59.3 94 39.4
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 9.2e-07 58.9 126 38.1
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 1.2e-06 58.5 103 37.9
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.2e-06 58.5 157 33.8
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 1.6e-06 58.2 212 31.1
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.6e-06 58.2 206 30.6
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 1.6e-06 58.2 166 33.1
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 2.1e-06 57.8 237 30.8
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 2.7e-06 57.4 52 50.0
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 2.7e-06 57.4 107 34.6
Psat2g133080 Pisum sativum HOM05D000159 ORTHO05D000148 2.7e-06 57.4 215 31.6
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 6.0e-06 56.2 235 31.1
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 7.8e-06 55.8 135 28.1
Rhsim13G0085900 Rhododendron simsii HOM05D004206 ORTHO05D003325 7.8e-06 55.8 134 35.8
Hund07780 Selenicereus undatus HOM05D004206 ORTHO05D003325 7.8e-06 55.8 133 33.8
SGA_v2.0_scaffold75G24932 Striga asiatica HOM05D004206 ORTHO05D003325 7.8e-06 55.8 187 32.1


User provided reference genes

Program Settings